RNA–Protein interactions for RNA: ENST00000482979.5

ZKSCAN1-204, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

TSL 1 (best)

Gene ZKSCAN1, Length 1,449 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-204ENST00000482979 NWD2Q9ULI1 1742 aa18.85■□□□□ 0.61
ZKSCAN1-204ENST00000482979 BRWD3Q6RI45 1802 aa18.83■□□□□ 0.61
ZKSCAN1-204ENST00000482979 EIF3AQ14152 1382 aaKnown RBP18.83■□□□□ 0.61
ZKSCAN1-204ENST00000482979 USP47Q96K76 1375 aa18.83■□□□□ 0.61
ZKSCAN1-204ENST00000482979 FAM83GA6ND36 823 aa18.83■□□□□ 0.6
ZKSCAN1-204ENST00000482979 VPS72Q15906 364 aa18.83■□□□□ 0.6
ZKSCAN1-204ENST00000482979 ATP7BP35670 1465 aa18.82■□□□□ 0.6
ZKSCAN1-204ENST00000482979 CRYBG1Q9Y4K1 1723 aa18.81■□□□□ 0.6
ZKSCAN1-204ENST00000482979 NRAPQ86VF7 1730 aa18.81■□□□□ 0.6
ZKSCAN1-204ENST00000482979 EIF4G2P78344 907 aaKnown RBP eCLIP18.8■□□□□ 0.6
ZKSCAN1-204ENST00000482979 HSPA5P11021 654 aaKnown RBP18.79■□□□□ 0.6
ZKSCAN1-204ENST00000482979 SEPT12Q8IYM1 358 aa18.79■□□□□ 0.6
ZKSCAN1-204ENST00000482979 ITSN1Q15811 1721 aa18.78■□□□□ 0.6
ZKSCAN1-204ENST00000482979 NGDNQ8NEJ9 315 aaKnown RBP18.78■□□□□ 0.6
ZKSCAN1-204ENST00000482979 NUDT16Q96DE0 195 aaKnown RBP18.77■□□□□ 0.6
ZKSCAN1-204ENST00000482979 QRICH2Q9H0J4 1663 aa18.77■□□□□ 0.6
ZKSCAN1-204ENST00000482979 COL14A1Q05707 1796 aaKnown RBP18.77■□□□□ 0.59
ZKSCAN1-204ENST00000482979 ONECUT3O60422 494 aaPredicted RBP18.76■□□□□ 0.59
ZKSCAN1-204ENST00000482979 CCDC125Q86Z20 511 aa18.76■□□□□ 0.59
ZKSCAN1-204ENST00000482979 CCDC9Q9Y3X0 531 aaKnown RBP18.76■□□□□ 0.59
ZKSCAN1-204ENST00000482979 TOPAZ1Q8N9V7 1692 aa18.76■□□□□ 0.59
ZKSCAN1-204ENST00000482979 CDK19Q9BWU1 502 aa18.75■□□□□ 0.59
ZKSCAN1-204ENST00000482979 BTG4Q9NY30 223 aa18.75■□□□□ 0.59
ZKSCAN1-204ENST00000482979 PAK3O75914 559 aaPredicted RBP18.74■□□□□ 0.59
ZKSCAN1-204ENST00000482979 BLMP54132 1417 aaPredicted RBP18.74■□□□□ 0.59
ZKSCAN1-204ENST00000482979 ST20-MTHFSA0A0A6YYL1 179 aa18.73■□□□□ 0.59
ZKSCAN1-204ENST00000482979 PHRF1Q9P1Y6 1649 aaKnown RBP18.72■□□□□ 0.59
ZKSCAN1-204ENST00000482979 POLR3AO14802 1390 aaPredicted RBP18.71■□□□□ 0.59
ZKSCAN1-204ENST00000482979 KRT27Q7Z3Y8 459 aa18.71■□□□□ 0.59
ZKSCAN1-204ENST00000482979 CENPJQ9HC77 1338 aaPredicted RBP18.71■□□□□ 0.59
ZKSCAN1-204ENST00000482979 FAM98CQ17RN3 349 aaKnown RBP18.7■□□□□ 0.58
ZKSCAN1-204ENST00000482979 DEFB132Q7Z7B7 95 aa18.7■□□□□ 0.58
ZKSCAN1-204ENST00000482979 ZRANB1Q9UGI0 708 aa18.7■□□□□ 0.58
ZKSCAN1-204ENST00000482979 ACEP12821 1306 aa18.69■□□□□ 0.58
ZKSCAN1-204ENST00000482979 KIAA0232Q92628 1395 aa18.68■□□□□ 0.58
ZKSCAN1-204ENST00000482979 NUTM2GQ5VZR2 741 aa18.68■□□□□ 0.58
ZKSCAN1-204ENST00000482979 PRDM11Q9NQV5 511 aa18.68■□□□□ 0.58
ZKSCAN1-204ENST00000482979 CCDC61Q9Y6R9 512 aa18.68■□□□□ 0.58
ZKSCAN1-204ENST00000482979 SRCAPQ6ZRS2 3230 aa18.68■□□□□ 0.58
ZKSCAN1-204ENST00000482979 SPATA31A5Q5VU36 1347 aa18.67■□□□□ 0.58
ZKSCAN1-204ENST00000482979 SPATA31A7Q8IWB4 1347 aa18.67■□□□□ 0.58
ZKSCAN1-204ENST00000482979 PLEKHG3A1L390 1219 aa18.67■□□□□ 0.58
ZKSCAN1-204ENST00000482979 A0A0G2JS52 829 aa18.66■□□□□ 0.58
ZKSCAN1-204ENST00000482979 MYT1Q01538 1121 aa18.66■□□□□ 0.58
ZKSCAN1-204ENST00000482979 THSD7AQ9UPZ6 1657 aa18.66■□□□□ 0.58
ZKSCAN1-204ENST00000482979 ZNF316A6NFI3 1004 aaPredicted RBP18.66■□□□□ 0.58
ZKSCAN1-204ENST00000482979 CHRNA2Q15822 529 aa18.66■□□□□ 0.58
ZKSCAN1-204ENST00000482979 NRKQ7Z2Y5 1582 aa18.64■□□□□ 0.58
ZKSCAN1-204ENST00000482979 ZC3H6P61129 1189 aaKnown RBP18.64■□□□□ 0.57
ZKSCAN1-204ENST00000482979 TESK2Q96S53 571 aa18.64■□□□□ 0.57
ZKSCAN1-204ENST00000482979 PPIP5K1Q6PFW1 1433 aa18.63■□□□□ 0.57
ZKSCAN1-204ENST00000482979 FAM182BQ5T319 152 aa18.63■□□□□ 0.57
ZKSCAN1-204ENST00000482979 CABP2Q9NPB3 220 aa18.63■□□□□ 0.57
ZKSCAN1-204ENST00000482979 SRPK2P78362 688 aaKnown RBP18.62■□□□□ 0.57
ZKSCAN1-204ENST00000482979 SF3B2Q13435 895 aaKnown RBP18.62■□□□□ 0.57
ZKSCAN1-204ENST00000482979 SBNO2Q9Y2G9 1366 aa18.62■□□□□ 0.57
ZKSCAN1-204ENST00000482979 SPATA31A1Q5TZJ5 1347 aa18.61■□□□□ 0.57
ZKSCAN1-204ENST00000482979 STRN4Q9NRL3 753 aa18.61■□□□□ 0.57
ZKSCAN1-204ENST00000482979 USP19O94966 1318 aa18.61■□□□□ 0.57
ZKSCAN1-204ENST00000482979 TMF1P82094 1093 aa18.6■□□□□ 0.57
ZKSCAN1-204ENST00000482979 ABTB2Q8N961 1025 aa18.6■□□□□ 0.57
ZKSCAN1-204ENST00000482979 POLR3GLQ9BT43 218 aa18.6■□□□□ 0.57
ZKSCAN1-204ENST00000482979 LMO7Q8WWI1 1683 aa18.59■□□□□ 0.57
ZKSCAN1-204ENST00000482979 CAMTA1Q9Y6Y1 1673 aa18.59■□□□□ 0.57
ZKSCAN1-204ENST00000482979 C11orf95C9JLR9 678 aaPredicted RBP18.58■□□□□ 0.57
ZKSCAN1-204ENST00000482979 RGPD1P0DJD0 1748 aa18.58■□□□□ 0.56
ZKSCAN1-204ENST00000482979 SSH2Q76I76 1423 aa18.57■□□□□ 0.56
ZKSCAN1-204ENST00000482979 CPDO75976 1380 aa18.57■□□□□ 0.56
ZKSCAN1-204ENST00000482979 TNS1Q9HBL0 1735 aaKnown RBP18.56■□□□□ 0.56
ZKSCAN1-204ENST00000482979 KIF7Q2M1P5 1343 aa18.56■□□□□ 0.56
ZKSCAN1-204ENST00000482979 EVC2Q86UK5 1308 aa18.56■□□□□ 0.56
ZKSCAN1-204ENST00000482979 CCDC7Q96M83 1385 aa18.56■□□□□ 0.56
ZKSCAN1-204ENST00000482979 USP6P35125 1406 aa18.56■□□□□ 0.56
ZKSCAN1-204ENST00000482979 BAG6P46379 1132 aa18.56■□□□□ 0.56
ZKSCAN1-204ENST00000482979 CABP1Q9NZU7 370 aa18.56■□□□□ 0.56
ZKSCAN1-204ENST00000482979 USP35Q9P2H5 1018 aa18.55■□□□□ 0.56
ZKSCAN1-204ENST00000482979 WASHC2AQ641Q2 1341 aa18.55■□□□□ 0.56
ZKSCAN1-204ENST00000482979 SLC24A1O60721 1099 aa18.54■□□□□ 0.56
ZKSCAN1-204ENST00000482979 GCP02774 474 aa18.54■□□□□ 0.56
ZKSCAN1-204ENST00000482979 EN1Q05925 392 aaPredicted RBP18.54■□□□□ 0.56
ZKSCAN1-204ENST00000482979 LARP1Q6PKG0 1096 aaKnown RBP18.54■□□□□ 0.56
ZKSCAN1-204ENST00000482979 NLRP13Q86W25 1043 aa18.54■□□□□ 0.56
ZKSCAN1-204ENST00000482979 BRD4O60885 1362 aaPredicted RBP18.53■□□□□ 0.56
ZKSCAN1-204ENST00000482979 MYOM1P52179 1685 aa18.53■□□□□ 0.56
ZKSCAN1-204ENST00000482979 SLIT3O75094 1523 aa18.52■□□□□ 0.56
ZKSCAN1-204ENST00000482979 EVA1CP58658 441 aa18.52■□□□□ 0.56
ZKSCAN1-204ENST00000482979 BARGINQ6ZT62 677 aa18.52■□□□□ 0.56
ZKSCAN1-204ENST00000482979 PIK3C2AO00443 1686 aa18.52■□□□□ 0.56
ZKSCAN1-204ENST00000482979 DISP2A7MBM2 1401 aa18.52■□□□□ 0.55
ZKSCAN1-204ENST00000482979 CDCA8Q53HL2 280 aa18.51■□□□□ 0.55
ZKSCAN1-204ENST00000482979 COL5A2P05997 1499 aaPredicted RBP18.51■□□□□ 0.55
ZKSCAN1-204ENST00000482979 PSDA5PKW4 1024 aaPredicted RBP18.5■□□□□ 0.55
ZKSCAN1-204ENST00000482979 NLRP6P59044 892 aa18.49■□□□□ 0.55
ZKSCAN1-204ENST00000482979 TCP11L2Q8N4U5 519 aa18.49■□□□□ 0.55
ZKSCAN1-204ENST00000482979 AKAP12Q02952 1782 aa18.48■□□□□ 0.55
ZKSCAN1-204ENST00000482979 LRP5O75197 1615 aa18.48■□□□□ 0.55
ZKSCAN1-204ENST00000482979 TRIM37O94972 964 aa18.48■□□□□ 0.55
ZKSCAN1-204ENST00000482979 EZH2Q15910 746 aaKnown RBP18.48■□□□□ 0.55
ZKSCAN1-204ENST00000482979 FAM196AQ6ZSG2 479 aa18.48■□□□□ 0.55
ZKSCAN1-204ENST00000482979 COL18A1P39060 1754 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms