RNA–Protein interactions for RNA: ENST00000480342.5

RERE-213, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 2

Gene RERE, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-213ENST00000480342 STAG3Q9UJ98 1225 aa12.7□□□□□ -0.38
RERE-213ENST00000480342 CEP170BQ9Y4F5 1589 aaPredicted RBP12.7□□□□□ -0.38
RERE-213ENST00000480342 FBXO31Q5XUX0 539 aaPredicted RBP12.69□□□□□ -0.38
RERE-213ENST00000480342 CGNL1Q0VF96 1302 aa12.69□□□□□ -0.38
RERE-213ENST00000480342 NSD2O96028 1365 aa12.69□□□□□ -0.38
RERE-213ENST00000480342 MED14O60244 1454 aa12.69□□□□□ -0.38
RERE-213ENST00000480342 TRHP20396 242 aaPredicted RBP12.68□□□□□ -0.38
RERE-213ENST00000480342 WWC1Q8IX03 1113 aa12.68□□□□□ -0.38
RERE-213ENST00000480342 EVC2Q86UK5 1308 aa12.68□□□□□ -0.38
RERE-213ENST00000480342 ATAD2Q6PL18 1390 aa12.68□□□□□ -0.38
RERE-213ENST00000480342 CARD14Q9BXL6 1004 aa12.68□□□□□ -0.38
RERE-213ENST00000480342 FAM43AQ8N2R8 423 aa12.68□□□□□ -0.38
RERE-213ENST00000480342 UPF2Q9HAU5 1272 aaKnown RBP12.68□□□□□ -0.38
RERE-213ENST00000480342 PCDHB15Q9Y5E8 787 aa12.68□□□□□ -0.38
RERE-213ENST00000480342 SETD1BQ9UPS6 1966 aaKnown RBP12.67□□□□□ -0.38
RERE-213ENST00000480342 RLBP1P12271 317 aa12.67□□□□□ -0.38
RERE-213ENST00000480342 PDE3AQ14432 1141 aa12.67□□□□□ -0.38
RERE-213ENST00000480342 MAPK8IP3Q9UPT6 1336 aa12.67□□□□□ -0.38
RERE-213ENST00000480342 PIK3R4Q99570 1358 aa12.66□□□□□ -0.38
RERE-213ENST00000480342 TBC1D2Q9BYX2 928 aa12.65□□□□□ -0.38
RERE-213ENST00000480342 PDZRN3Q9UPQ7 1066 aa12.65□□□□□ -0.38
RERE-213ENST00000480342 RRAGDQ9NQL2 400 aaPredicted RBP12.64□□□□□ -0.39
RERE-213ENST00000480342 XRN1Q8IZH2 1706 aaKnown RBP12.64□□□□□ -0.39
RERE-213ENST00000480342 ATP7BP35670 1465 aa12.64□□□□□ -0.39
RERE-213ENST00000480342 MLECQ14165 292 aa12.64□□□□□ -0.39
RERE-213ENST00000480342 PTCH1Q13635 1447 aa12.63□□□□□ -0.39
RERE-213ENST00000480342 ANKRD36BQ8N2N9 1353 aa12.63□□□□□ -0.39
RERE-213ENST00000480342 RARSP54136 660 aaKnown RBP12.63□□□□□ -0.39
RERE-213ENST00000480342 RSPH6AQ9H0K4 717 aa12.63□□□□□ -0.39
RERE-213ENST00000480342 KIF20BQ96Q89 1820 aa12.62□□□□□ -0.39
RERE-213ENST00000480342 TCP11L2Q8N4U5 519 aa12.62□□□□□ -0.39
RERE-213ENST00000480342 ANTXR1Q9H6X2 564 aa12.62□□□□□ -0.39
RERE-213ENST00000480342 ITSN1Q15811 1721 aa12.62□□□□□ -0.39
RERE-213ENST00000480342 ADAMTS13Q76LX8 1427 aa12.62□□□□□ -0.39
RERE-213ENST00000480342 MORC1Q86VD1 984 aa12.62□□□□□ -0.39
RERE-213ENST00000480342 PMFBP1Q8TBY8 1022 aa12.62□□□□□ -0.39
RERE-213ENST00000480342 TOPAZ1Q8N9V7 1692 aa12.62□□□□□ -0.39
RERE-213ENST00000480342 MFAP1P55081 439 aaKnown RBP12.61□□□□□ -0.39
RERE-213ENST00000480342 TBC1D32Q96NH3 1257 aa12.61□□□□□ -0.39
RERE-213ENST00000480342 THEMISQ8N1K5 641 aaPredicted RBP12.61□□□□□ -0.39
RERE-213ENST00000480342 PANK2Q9BZ23 570 aa12.61□□□□□ -0.39
RERE-213ENST00000480342 AKAP12Q02952 1782 aa12.6□□□□□ -0.39
RERE-213ENST00000480342 L1TD1Q5T7N2 865 aaKnown RBP12.6□□□□□ -0.39
RERE-213ENST00000480342 UBE2Q2Q8WVN8 375 aa12.6□□□□□ -0.39
RERE-213ENST00000480342 TRAK1Q9UPV9 953 aa12.6□□□□□ -0.39
RERE-213ENST00000480342 EID1Q9Y6B2 187 aa12.6□□□□□ -0.39
RERE-213ENST00000480342 MON2Q7Z3U7 1717 aa12.6□□□□□ -0.39
RERE-213ENST00000480342 XRCC6P12956 609 aaKnown RBP eCLIP12.59□□□□□ -0.39
RERE-213ENST00000480342 SLC12A5Q9H2X9 1139 aa12.59□□□□□ -0.39
RERE-213ENST00000480342 RWDD1Q9H446 243 aaPredicted RBP12.59□□□□□ -0.39
RERE-213ENST00000480342 GOLGA6L3A6NEY3 463 aa12.59□□□□□ -0.39
RERE-213ENST00000480342 SENP3Q9H4L4 574 aaPredicted RBP12.59□□□□□ -0.39
RERE-213ENST00000480342 FTSJ3Q8IY81 847 aaKnown RBP12.58□□□□□ -0.4
RERE-213ENST00000480342 RUNDC1Q96C34 613 aa12.58□□□□□ -0.4
RERE-213ENST00000480342 CDC42BPGQ6DT37 1551 aa12.58□□□□□ -0.4
RERE-213ENST00000480342 TBX22Q9Y458 520 aa12.57□□□□□ -0.4
RERE-213ENST00000480342 MTHFSP49914 203 aa12.57□□□□□ -0.4
RERE-213ENST00000480342 TSR2Q969E8 191 aaKnown RBP12.57□□□□□ -0.4
RERE-213ENST00000480342 MCM4P33991 863 aa12.56□□□□□ -0.4
RERE-213ENST00000480342 C22orf23Q9BZE7 217 aa12.56□□□□□ -0.4
RERE-213ENST00000480342 CHD2O14647 1828 aaKnown RBP12.56□□□□□ -0.4
RERE-213ENST00000480342 TMEM132EQ6IEE7 984 aa12.56□□□□□ -0.4
RERE-213ENST00000480342 NAP1L5Q96NT1 182 aaPredicted RBP12.56□□□□□ -0.4
RERE-213ENST00000480342 U2AF1L5P0DN76 240 aaPredicted RBP12.55□□□□□ -0.4
RERE-213ENST00000480342 U2AF1Q01081 240 aaKnown RBP eCLIP12.55□□□□□ -0.4
RERE-213ENST00000480342 NGEFQ8N5V2 710 aa12.55□□□□□ -0.4
RERE-213ENST00000480342 NWD1Q149M9 1564 aa12.55□□□□□ -0.4
RERE-213ENST00000480342 NSD3Q9BZ95 1437 aa12.55□□□□□ -0.4
RERE-213ENST00000480342 LRRC7Q96NW7 1537 aa12.54□□□□□ -0.4
RERE-213ENST00000480342 TRAK2O60296 914 aa12.54□□□□□ -0.4
RERE-213ENST00000480342 POLR3AO14802 1390 aaPredicted RBP12.54□□□□□ -0.4
RERE-213ENST00000480342 MVPQ14764 893 aaKnown RBP12.53□□□□□ -0.4
RERE-213ENST00000480342 ITPRIPQ8IWB1 547 aa12.53□□□□□ -0.4
RERE-213ENST00000480342 TERF2IPQ9NYB0 399 aa12.53□□□□□ -0.4
RERE-213ENST00000480342 METP08581 1390 aa12.53□□□□□ -0.4
RERE-213ENST00000480342 USP54Q70EL1 1684 aa12.53□□□□□ -0.4
RERE-213ENST00000480342 PRAM1Q96QH2 718 aa12.53□□□□□ -0.4
RERE-213ENST00000480342 VIRMAQ69YN4 1812 aaKnown RBP12.53□□□□□ -0.4
RERE-213ENST00000480342 NRKQ7Z2Y5 1582 aa12.53□□□□□ -0.4
RERE-213ENST00000480342 CD163L1Q9NR16 1453 aa12.53□□□□□ -0.4
RERE-213ENST00000480342 DZIP1LQ8IYY4 767 aaKnown RBP12.53□□□□□ -0.4
RERE-213ENST00000480342 SMC4Q9NTJ3 1288 aa12.53□□□□□ -0.4
RERE-213ENST00000480342 ZKSCAN2Q63HK3 967 aa12.52□□□□□ -0.41
RERE-213ENST00000480342 NCBP3Q53F19 620 aaKnown RBP12.52□□□□□ -0.41
RERE-213ENST00000480342 PNNQ9H307 717 aaKnown RBP12.52□□□□□ -0.41
RERE-213ENST00000480342 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.52□□□□□ -0.41
RERE-213ENST00000480342 ANKARQ7Z5J8 1434 aa12.51□□□□□ -0.41
RERE-213ENST00000480342 NUTM2DQ5VT03 806 aaPredicted RBP12.51□□□□□ -0.41
RERE-213ENST00000480342 WDR63Q8IWG1 891 aa12.51□□□□□ -0.41
RERE-213ENST00000480342 MYH16Q9H6N6 1097 aa12.51□□□□□ -0.41
RERE-213ENST00000480342 FOXD4L1Q9NU39 408 aa12.51□□□□□ -0.41
RERE-213ENST00000480342 CHMP5Q9NZZ3 219 aa12.51□□□□□ -0.41
RERE-213ENST00000480342 U2SURPO15042 1029 aaKnown RBP12.51□□□□□ -0.41
RERE-213ENST00000480342 FMN2Q9NZ56 1722 aa12.51□□□□□ -0.41
RERE-213ENST00000480342 CPSF1Q10570 1443 aaKnown RBP12.5□□□□□ -0.41
RERE-213ENST00000480342 EDC4Q6P2E9 1401 aaKnown RBP12.5□□□□□ -0.41
RERE-213ENST00000480342 SHPRHQ149N8 1683 aa12.5□□□□□ -0.41
RERE-213ENST00000480342 SAFB2Q14151 953 aaKnown RBP eCLIP12.5□□□□□ -0.41
RERE-213ENST00000480342 TXNDC2Q86VQ3 553 aa12.5□□□□□ -0.41
RERE-213ENST00000480342 HSCBQ8IWL3 235 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms