RNA–Protein interactions for RNA: ENST00000478999.1

VPS45-208, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 468 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-208ENST00000478999 ANKRD30BQ9BXX2 1392 aa11.72□□□□□ -0.53
VPS45-208ENST00000478999 FAM83GA6ND36 823 aa11.72□□□□□ -0.53
VPS45-208ENST00000478999 ADRA2BP18089 450 aa11.72□□□□□ -0.53
VPS45-208ENST00000478999 STK26Q9P289 416 aa11.72□□□□□ -0.53
VPS45-208ENST00000478999 GTF3C3Q9Y5Q9 886 aa11.72□□□□□ -0.53
VPS45-208ENST00000478999 NRXN1Q9ULB1 1477 aa11.7□□□□□ -0.54
VPS45-208ENST00000478999 CCER2I3L3R5 266 aa11.7□□□□□ -0.54
VPS45-208ENST00000478999 CAMKK2Q96RR4 588 aa11.7□□□□□ -0.54
VPS45-208ENST00000478999 SBNO1A3KN83 1393 aa11.69□□□□□ -0.54
VPS45-208ENST00000478999 ADGRF5Q8IZF2 1346 aa11.69□□□□□ -0.54
VPS45-208ENST00000478999 BTG4Q9NY30 223 aa11.69□□□□□ -0.54
VPS45-208ENST00000478999 SPATA31E1Q6ZUB1 1445 aa11.69□□□□□ -0.54
VPS45-208ENST00000478999 LMOD2Q6P5Q4 547 aa11.68□□□□□ -0.54
VPS45-208ENST00000478999 YTHDC1Q96MU7 727 aaKnown RBP11.68□□□□□ -0.54
VPS45-208ENST00000478999 PHF8Q9UPP1 1060 aa11.68□□□□□ -0.54
VPS45-208ENST00000478999 CHD4Q14839 1912 aa11.68□□□□□ -0.54
VPS45-208ENST00000478999 ARHGEF10O15013 1369 aa11.67□□□□□ -0.54
VPS45-208ENST00000478999 SPATA31A5Q5VU36 1347 aa11.67□□□□□ -0.54
VPS45-208ENST00000478999 SPATA31A7Q8IWB4 1347 aa11.67□□□□□ -0.54
VPS45-208ENST00000478999 PSME1Q06323 249 aa11.67□□□□□ -0.54
VPS45-208ENST00000478999 PIK3C2GO75747 1445 aa11.67□□□□□ -0.54
VPS45-208ENST00000478999 ABCC11Q96J66 1382 aa11.67□□□□□ -0.54
VPS45-208ENST00000478999 ITSN1Q15811 1721 aa11.66□□□□□ -0.54
VPS45-208ENST00000478999 TRIM37O94972 964 aa11.66□□□□□ -0.54
VPS45-208ENST00000478999 TMEM132EQ6IEE7 984 aa11.66□□□□□ -0.54
VPS45-208ENST00000478999 YTHDC2Q9H6S0 1430 aaKnown RBP11.66□□□□□ -0.54
VPS45-208ENST00000478999 PARD3Q8TEW0 1356 aa11.66□□□□□ -0.54
VPS45-208ENST00000478999 CASZ1Q86V15 1759 aa11.65□□□□□ -0.54
VPS45-208ENST00000478999 NINLQ9Y2I6 1382 aa11.65□□□□□ -0.55
VPS45-208ENST00000478999 PHRF1Q9P1Y6 1649 aaKnown RBP11.64□□□□□ -0.55
VPS45-208ENST00000478999 SBF2Q86WG5 1849 aa11.63□□□□□ -0.55
VPS45-208ENST00000478999 ANP32CO43423 234 aa11.63□□□□□ -0.55
VPS45-208ENST00000478999 APBA3O96018 575 aa11.63□□□□□ -0.55
VPS45-208ENST00000478999 ARHGEF28Q8N1W1 1705 aaKnown RBP11.63□□□□□ -0.55
VPS45-208ENST00000478999 NRKQ7Z2Y5 1582 aa11.62□□□□□ -0.55
VPS45-208ENST00000478999 MYOM1P52179 1685 aa11.62□□□□□ -0.55
VPS45-208ENST00000478999 RGPD3A6NKT7 1758 aaPredicted RBP11.62□□□□□ -0.55
VPS45-208ENST00000478999 RGPD4Q7Z3J3 1758 aa11.62□□□□□ -0.55
VPS45-208ENST00000478999 EIF4G2P78344 907 aaKnown RBP eCLIP11.62□□□□□ -0.55
VPS45-208ENST00000478999 DDX10Q13206 875 aaKnown RBP11.62□□□□□ -0.55
VPS45-208ENST00000478999 FAM196AQ6ZSG2 479 aa11.62□□□□□ -0.55
VPS45-208ENST00000478999 SPON1Q9HCB6 807 aa11.62□□□□□ -0.55
VPS45-208ENST00000478999 POGKQ9P215 609 aa11.62□□□□□ -0.55
VPS45-208ENST00000478999 PPP1R1BQ9UD71 204 aaPredicted RBP11.62□□□□□ -0.55
VPS45-208ENST00000478999 SAFB2Q14151 953 aaKnown RBP eCLIP11.61□□□□□ -0.55
VPS45-208ENST00000478999 PMFBP1Q8TBY8 1022 aa11.61□□□□□ -0.55
VPS45-208ENST00000478999 SPATA31A1Q5TZJ5 1347 aa11.6□□□□□ -0.55
VPS45-208ENST00000478999 DCAF8L1A6NGE4 600 aa11.6□□□□□ -0.55
VPS45-208ENST00000478999 KCNQ2O43526 872 aa11.6□□□□□ -0.55
VPS45-208ENST00000478999 CFAP70Q5T0N1 1121 aa11.6□□□□□ -0.55
VPS45-208ENST00000478999 IFFO2Q5TF58 517 aa11.6□□□□□ -0.55
VPS45-208ENST00000478999 ZNF784Q8NCA9 323 aaPredicted RBP11.6□□□□□ -0.55
VPS45-208ENST00000478999 KDM2AQ9Y2K7 1162 aa11.6□□□□□ -0.55
VPS45-208ENST00000478999 UTRNP46939 3433 aa11.6□□□□□ -0.55
VPS45-208ENST00000478999 SENP3-EIF4A1A0A087X0R7 540 aa11.59□□□□□ -0.55
VPS45-208ENST00000478999 NBPF8Q3BBV2 869 aa11.59□□□□□ -0.55
VPS45-208ENST00000478999 NBPF14Q5TI25 921 aa11.59□□□□□ -0.55
VPS45-208ENST00000478999 L3MBTL2Q969R5 705 aa11.59□□□□□ -0.55
VPS45-208ENST00000478999 C14orf93Q9H972 538 aaKnown RBP11.59□□□□□ -0.55
VPS45-208ENST00000478999 PARP4Q9UKK3 1724 aaKnown RBP11.59□□□□□ -0.55
VPS45-208ENST00000478999 DLC1Q96QB1 1528 aa11.59□□□□□ -0.55
VPS45-208ENST00000478999 ANKARQ7Z5J8 1434 aa11.59□□□□□ -0.55
VPS45-208ENST00000478999 KIAA1210Q9ULL0 1709 aa11.58□□□□□ -0.56
VPS45-208ENST00000478999 DCAF11Q8TEB1 546 aa11.58□□□□□ -0.56
VPS45-208ENST00000478999 SIRT1Q96EB6 747 aa11.58□□□□□ -0.56
VPS45-208ENST00000478999 PEAK1Q9H792 1746 aa11.57□□□□□ -0.56
VPS45-208ENST00000478999 PRAM1Q96QH2 718 aa11.57□□□□□ -0.56
VPS45-208ENST00000478999 PRDM11Q9NQV5 511 aa11.57□□□□□ -0.56
VPS45-208ENST00000478999 EIF3AQ14152 1382 aaKnown RBP11.56□□□□□ -0.56
VPS45-208ENST00000478999 HSPA5P11021 654 aaKnown RBP11.56□□□□□ -0.56
VPS45-208ENST00000478999 KIAA0232Q92628 1395 aa11.55□□□□□ -0.56
VPS45-208ENST00000478999 CHRNA2Q15822 529 aa11.55□□□□□ -0.56
VPS45-208ENST00000478999 STRN4Q9NRL3 753 aa11.55□□□□□ -0.56
VPS45-208ENST00000478999 TRAK1Q9UPV9 953 aa11.55□□□□□ -0.56
VPS45-208ENST00000478999 LMO7Q8WWI1 1683 aa11.55□□□□□ -0.56
VPS45-208ENST00000478999 GPRASP1Q5JY77 1395 aa11.54□□□□□ -0.56
VPS45-208ENST00000478999 ADGRB1O14514 1584 aa11.54□□□□□ -0.56
VPS45-208ENST00000478999 C1QTNF8P60827 252 aa11.54□□□□□ -0.56
VPS45-208ENST00000478999 USP35Q9P2H5 1018 aa11.54□□□□□ -0.56
VPS45-208ENST00000478999 TULP4Q9NRJ4 1543 aa11.54□□□□□ -0.56
VPS45-208ENST00000478999 MINK1Q8N4C8 1332 aaPredicted RBP11.54□□□□□ -0.56
VPS45-208ENST00000478999 PRR36Q9H6K5 1346 aa11.54□□□□□ -0.56
VPS45-208ENST00000478999 CCDC7Q96M83 1385 aa11.54□□□□□ -0.56
VPS45-208ENST00000478999 SSH2Q76I76 1423 aa11.53□□□□□ -0.56
VPS45-208ENST00000478999 QRICH2Q9H0J4 1663 aa11.53□□□□□ -0.56
VPS45-208ENST00000478999 PDE3BQ13370 1112 aa11.53□□□□□ -0.56
VPS45-208ENST00000478999 BARGINQ6ZT62 677 aa11.53□□□□□ -0.56
VPS45-208ENST00000478999 HIRIP3Q9BW71 556 aaPredicted RBP11.53□□□□□ -0.56
VPS45-208ENST00000478999 PDGFDQ9GZP0 370 aaPredicted RBP11.53□□□□□ -0.56
VPS45-208ENST00000478999 ANO8Q9HCE9 1232 aaPredicted RBP11.53□□□□□ -0.56
VPS45-208ENST00000478999 WNK3Q9BYP7 1800 aa11.53□□□□□ -0.56
VPS45-208ENST00000478999 WASHC2AQ641Q2 1341 aa11.52□□□□□ -0.57
VPS45-208ENST00000478999 LRRC37A3O60309 1634 aa11.52□□□□□ -0.57
VPS45-208ENST00000478999 AKAP12Q02952 1782 aa11.51□□□□□ -0.57
VPS45-208ENST00000478999 STAC3Q96MF2 364 aa11.51□□□□□ -0.57
VPS45-208ENST00000478999 ROCK2O75116 1388 aaKnown RBP11.51□□□□□ -0.57
VPS45-208ENST00000478999 TOPAZ1Q8N9V7 1692 aa11.5□□□□□ -0.57
VPS45-208ENST00000478999 PAK3O75914 559 aaPredicted RBP11.5□□□□□ -0.57
VPS45-208ENST00000478999 PTGER2P43116 358 aa11.5□□□□□ -0.57
VPS45-208ENST00000478999 ZBTB7AO95365 584 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms