RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 SIRT1Q96EB6 747 aa21.62■■□□□ 1.05
USP11-207ENST00000478596 CAMTA1Q9Y6Y1 1673 aa21.62■■□□□ 1.05
USP11-207ENST00000478596 ADGRF5Q8IZF2 1346 aa21.61■■□□□ 1.05
USP11-207ENST00000478596 ITGAEP38570 1179 aa21.61■■□□□ 1.05
USP11-207ENST00000478596 TMEM132EQ6IEE7 984 aa21.58■■□□□ 1.05
USP11-207ENST00000478596 YTHDC2Q9H6S0 1430 aaKnown RBP21.57■■□□□ 1.04
USP11-207ENST00000478596 IFT172Q9UG01 1749 aa21.56■■□□□ 1.04
USP11-207ENST00000478596 RGPD8O14715 1765 aaPredicted RBP21.56■■□□□ 1.04
USP11-207ENST00000478596 PRDM11Q9NQV5 511 aa21.55■■□□□ 1.04
USP11-207ENST00000478596 TRPM3Q9HCF6 1732 aaPredicted RBP21.54■■□□□ 1.04
USP11-207ENST00000478596 ANKARQ7Z5J8 1434 aa21.54■■□□□ 1.04
USP11-207ENST00000478596 PDE3BQ13370 1112 aa21.53■■□□□ 1.04
USP11-207ENST00000478596 BARGINQ6ZT62 677 aa21.53■■□□□ 1.04
USP11-207ENST00000478596 PMFBP1Q8TBY8 1022 aa21.53■■□□□ 1.04
USP11-207ENST00000478596 ALS2Q96Q42 1657 aa21.53■■□□□ 1.04
USP11-207ENST00000478596 ANKRD30BQ9BXX2 1392 aa21.52■■□□□ 1.04
USP11-207ENST00000478596 PIK3C2GO75747 1445 aa21.51■■□□□ 1.03
USP11-207ENST00000478596 GPRASP1Q5JY77 1395 aa21.5■■□□□ 1.03
USP11-207ENST00000478596 NRKQ7Z2Y5 1582 aa21.5■■□□□ 1.03
USP11-207ENST00000478596 CEP350Q5VT06 3117 aa21.49■■□□□ 1.03
USP11-207ENST00000478596 TRIM26Q12899 539 aaPredicted RBP21.48■■□□□ 1.03
USP11-207ENST00000478596 CRYBG1Q9Y4K1 1723 aa21.48■■□□□ 1.03
USP11-207ENST00000478596 ACIN1Q9UKV3 1341 aaKnown RBP21.48■■□□□ 1.03
USP11-207ENST00000478596 CASZ1Q86V15 1759 aa21.47■■□□□ 1.03
USP11-207ENST00000478596 PTGER2P43116 358 aa21.47■■□□□ 1.03
USP11-207ENST00000478596 KIAA0232Q92628 1395 aa21.47■■□□□ 1.03
USP11-207ENST00000478596 C11orf95C9JLR9 678 aaPredicted RBP21.46■■□□□ 1.03
USP11-207ENST00000478596 STRN4Q9NRL3 753 aa21.46■■□□□ 1.03
USP11-207ENST00000478596 SPATA31E1Q6ZUB1 1445 aa21.46■■□□□ 1.03
USP11-207ENST00000478596 PLSCR1O15162 318 aa21.44■■□□□ 1.02
USP11-207ENST00000478596 SYT17Q9BSW7 474 aa21.44■■□□□ 1.02
USP11-207ENST00000478596 ANO8Q9HCE9 1232 aaPredicted RBP21.44■■□□□ 1.02
USP11-207ENST00000478596 USP35Q9P2H5 1018 aa21.44■■□□□ 1.02
USP11-207ENST00000478596 CHRNA2Q15822 529 aa21.43■■□□□ 1.02
USP11-207ENST00000478596 PRAM1Q96QH2 718 aa21.43■■□□□ 1.02
USP11-207ENST00000478596 MYOM1P52179 1685 aa21.43■■□□□ 1.02
USP11-207ENST00000478596 RGPD3A6NKT7 1758 aaPredicted RBP21.42■■□□□ 1.02
USP11-207ENST00000478596 ZBTB7AO95365 584 aa21.42■■□□□ 1.02
USP11-207ENST00000478596 RGL3Q3MIN7 710 aa21.42■■□□□ 1.02
USP11-207ENST00000478596 SSH2Q76I76 1423 aa21.42■■□□□ 1.02
USP11-207ENST00000478596 RGPD4Q7Z3J3 1758 aa21.42■■□□□ 1.02
USP11-207ENST00000478596 SLC4A1APQ9BWU0 796 aaKnown RBP21.42■■□□□ 1.02
USP11-207ENST00000478596 PDGFDQ9GZP0 370 aaPredicted RBP21.42■■□□□ 1.02
USP11-207ENST00000478596 C14orf93Q9H972 538 aaKnown RBP21.42■■□□□ 1.02
USP11-207ENST00000478596 TCP11L2Q8N4U5 519 aa21.41■■□□□ 1.02
USP11-207ENST00000478596 FHDC1Q9C0D6 1143 aaPredicted RBP21.41■■□□□ 1.02
USP11-207ENST00000478596 DHX57Q6P158 1386 aaKnown RBP21.4■■□□□ 1.02
USP11-207ENST00000478596 GIGYF1O75420 1035 aaPredicted RBP21.4■■□□□ 1.02
USP11-207ENST00000478596 SAFB2Q14151 953 aaKnown RBP eCLIP21.4■■□□□ 1.02
USP11-207ENST00000478596 CHD4Q14839 1912 aa21.38■■□□□ 1.01
USP11-207ENST00000478596 EVA1CP58658 441 aa21.38■■□□□ 1.01
USP11-207ENST00000478596 THRAP3Q9Y2W1 955 aaKnown RBP21.38■■□□□ 1.01
USP11-207ENST00000478596 EIF3AQ14152 1382 aaKnown RBP21.37■■□□□ 1.01
USP11-207ENST00000478596 PAK3O75914 559 aaPredicted RBP21.37■■□□□ 1.01
USP11-207ENST00000478596 PRR36Q9H6K5 1346 aa21.36■■□□□ 1.01
USP11-207ENST00000478596 DLC1Q96QB1 1528 aa21.36■■□□□ 1.01
USP11-207ENST00000478596 LARP1Q6PKG0 1096 aaKnown RBP21.36■■□□□ 1.01
USP11-207ENST00000478596 ATF5Q9Y2D1 282 aaPredicted RBP21.36■■□□□ 1.01
USP11-207ENST00000478596 OVOS2A0A0G2JMS6 1433 aa21.36■■□□□ 1.01
USP11-207ENST00000478596 OVOS2A0A0J9YW53 1432 aa21.36■■□□□ 1.01
USP11-207ENST00000478596 OVOS2Q6IE36 1432 aa21.36■■□□□ 1.01
USP11-207ENST00000478596 ZC3H6P61129 1189 aaKnown RBP21.35■■□□□ 1.01
USP11-207ENST00000478596 NGDNQ8NEJ9 315 aaKnown RBP21.35■■□□□ 1.01
USP11-207ENST00000478596 POGKQ9P215 609 aa21.35■■□□□ 1.01
USP11-207ENST00000478596 SGIP1Q9BQI5 828 aa21.34■■□□□ 1.01
USP11-207ENST00000478596 BCL11BQ9C0K0 894 aaPredicted RBP21.34■■□□□ 1.01
USP11-207ENST00000478596 TULP4Q9NRJ4 1543 aa21.34■■□□□ 1.01
USP11-207ENST00000478596 PROM2Q8N271 834 aa21.33■■□□□ 1.01
USP11-207ENST00000478596 MAP3K5Q99683 1374 aa21.33■■□□□ 1
USP11-207ENST00000478596 PHRF1Q9P1Y6 1649 aaKnown RBP21.33■■□□□ 1
USP11-207ENST00000478596 PEAK1Q9H792 1746 aa21.32■■□□□ 1
USP11-207ENST00000478596 CFAP70Q5T0N1 1121 aa21.32■■□□□ 1
USP11-207ENST00000478596 MTFR1LQ9H019 292 aa21.32■■□□□ 1
USP11-207ENST00000478596 PARP4Q9UKK3 1724 aaKnown RBP21.32■■□□□ 1
USP11-207ENST00000478596 PCGF6Q9BYE7 350 aa21.31■■□□□ 1
USP11-207ENST00000478596 ATP7BP35670 1465 aa21.31■■□□□ 1
USP11-207ENST00000478596 CPDO75976 1380 aa21.29■■□□□ 1
USP11-207ENST00000478596 HIRIP3Q9BW71 556 aaPredicted RBP21.29■■□□□ 1
USP11-207ENST00000478596 STK32BQ9NY57 414 aa21.28■■□□□ 1
USP11-207ENST00000478596 WASLO00401 505 aaPredicted RBP21.27■■□□□ 1
USP11-207ENST00000478596 SLC15A2Q16348 729 aa21.27■■□□□ 1
USP11-207ENST00000478596 LMO7Q8WWI1 1683 aa21.27■■□□□ 1
USP11-207ENST00000478596 PTF1AQ7RTS3 328 aa21.26■□□□□ 0.99
USP11-207ENST00000478596 ARXQ96QS3 562 aa21.26■□□□□ 0.99
USP11-207ENST00000478596 BCL9O00512 1426 aa21.25■□□□□ 0.99
USP11-207ENST00000478596 MINK1Q8N4C8 1332 aaPredicted RBP21.24■□□□□ 0.99
USP11-207ENST00000478596 GPR162Q16538 588 aa21.23■□□□□ 0.99
USP11-207ENST00000478596 NUTM2GQ5VZR2 741 aa21.23■□□□□ 0.99
USP11-207ENST00000478596 COL5A2P05997 1499 aaPredicted RBP21.23■□□□□ 0.99
USP11-207ENST00000478596 SBF2Q86WG5 1849 aa21.22■□□□□ 0.99
USP11-207ENST00000478596 CRB1P82279 1406 aa21.22■□□□□ 0.99
USP11-207ENST00000478596 TXNRD1Q16881 649 aa21.22■□□□□ 0.99
USP11-207ENST00000478596 GOLGB1Q14789 3259 aaKnown RBP21.21■□□□□ 0.99
USP11-207ENST00000478596 DDB1Q16531 1140 aa21.21■□□□□ 0.99
USP11-207ENST00000478596 AATKQ6ZMQ8 1374 aa21.21■□□□□ 0.99
USP11-207ENST00000478596 LRRC37A3O60309 1634 aa21.2■□□□□ 0.98
USP11-207ENST00000478596 ADGRB1O14514 1584 aa21.19■□□□□ 0.98
USP11-207ENST00000478596 SHANK3Q9BYB0 1731 aa21.19■□□□□ 0.98
USP11-207ENST00000478596 USP19O94966 1318 aa21.19■□□□□ 0.98
USP11-207ENST00000478596 TRAK1Q9UPV9 953 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms