RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 GPRASP1Q5JY77 1395 aa30.2■■■□□ 2.43
PDLIM1-202ENST00000477757 ADGRB1O14514 1584 aa30.2■■■□□ 2.42
PDLIM1-202ENST00000477757 TULP4Q9NRJ4 1543 aa30.19■■■□□ 2.42
PDLIM1-202ENST00000477757 R3HDM1Q15032 1099 aaKnown RBP30.19■■■□□ 2.42
PDLIM1-202ENST00000477757 FAM182BQ5T319 152 aa30.19■■■□□ 2.42
PDLIM1-202ENST00000477757 EIF3AQ14152 1382 aaKnown RBP30.18■■■□□ 2.42
PDLIM1-202ENST00000477757 POGKQ9P215 609 aa30.18■■■□□ 2.42
PDLIM1-202ENST00000477757 ACIN1Q9UKV3 1341 aaKnown RBP30.18■■■□□ 2.42
PDLIM1-202ENST00000477757 PRR36Q9H6K5 1346 aa30.14■■■□□ 2.42
PDLIM1-202ENST00000477757 EZH2Q15910 746 aaKnown RBP30.1■■■□□ 2.41
PDLIM1-202ENST00000477757 HIRIP3Q9BW71 556 aaPredicted RBP30.1■■■□□ 2.41
PDLIM1-202ENST00000477757 PRDM11Q9NQV5 511 aa30.1■■■□□ 2.41
PDLIM1-202ENST00000477757 PARD3Q8TEW0 1356 aa30.1■■■□□ 2.41
PDLIM1-202ENST00000477757 SPATA31A1Q5TZJ5 1347 aa30.08■■■□□ 2.41
PDLIM1-202ENST00000477757 CAMKK2Q96RR4 588 aa30.08■■■□□ 2.41
PDLIM1-202ENST00000477757 PHRF1Q9P1Y6 1649 aaKnown RBP30.07■■■□□ 2.4
PDLIM1-202ENST00000477757 MINK1Q8N4C8 1332 aaPredicted RBP30.07■■■□□ 2.4
PDLIM1-202ENST00000477757 RREB1Q92766 1687 aa30.07■■■□□ 2.4
PDLIM1-202ENST00000477757 KIAA0232Q92628 1395 aa30.05■■■□□ 2.4
PDLIM1-202ENST00000477757 FAM196AQ6ZSG2 479 aa30.05■■■□□ 2.4
PDLIM1-202ENST00000477757 ITSN1Q15811 1721 aa30.05■■■□□ 2.4
PDLIM1-202ENST00000477757 TRAK1Q9UPV9 953 aa30.04■■■□□ 2.4
PDLIM1-202ENST00000477757 WASLO00401 505 aaPredicted RBP30.03■■■□□ 2.4
PDLIM1-202ENST00000477757 TRIM37O94972 964 aa30.03■■■□□ 2.4
PDLIM1-202ENST00000477757 NGDNQ8NEJ9 315 aaKnown RBP30.03■■■□□ 2.4
PDLIM1-202ENST00000477757 ATP7BP35670 1465 aa30.02■■■□□ 2.4
PDLIM1-202ENST00000477757 PAK3O75914 559 aaPredicted RBP30.02■■■□□ 2.4
PDLIM1-202ENST00000477757 NUP188Q5SRE5 1749 aa30.02■■■□□ 2.4
PDLIM1-202ENST00000477757 APBA3O96018 575 aa29.97■■■□□ 2.39
PDLIM1-202ENST00000477757 CHRNA2Q15822 529 aa29.97■■■□□ 2.39
PDLIM1-202ENST00000477757 STRN4Q9NRL3 753 aa29.96■■■□□ 2.39
PDLIM1-202ENST00000477757 SSH2Q76I76 1423 aa29.96■■■□□ 2.39
PDLIM1-202ENST00000477757 ARHGEF28Q8N1W1 1705 aaKnown RBP29.95■■■□□ 2.38
PDLIM1-202ENST00000477757 NRKQ7Z2Y5 1582 aa29.94■■■□□ 2.38
PDLIM1-202ENST00000477757 BARGINQ6ZT62 677 aa29.93■■■□□ 2.38
PDLIM1-202ENST00000477757 TOPAZ1Q8N9V7 1692 aa29.92■■■□□ 2.38
PDLIM1-202ENST00000477757 LMO7Q8WWI1 1683 aa29.91■■■□□ 2.38
PDLIM1-202ENST00000477757 YY1P25490 414 aa29.9■■■□□ 2.38
PDLIM1-202ENST00000477757 ZC3H6P61129 1189 aaKnown RBP29.9■■■□□ 2.38
PDLIM1-202ENST00000477757 USP35Q9P2H5 1018 aa29.89■■■□□ 2.38
PDLIM1-202ENST00000477757 POLR3AO14802 1390 aaPredicted RBP29.89■■■□□ 2.37
PDLIM1-202ENST00000477757 CAMTA1Q9Y6Y1 1673 aa29.88■■■□□ 2.37
PDLIM1-202ENST00000477757 PDE3BQ13370 1112 aa29.88■■■□□ 2.37
PDLIM1-202ENST00000477757 NUDT16Q96DE0 195 aaKnown RBP29.88■■■□□ 2.37
PDLIM1-202ENST00000477757 NBPF8Q3BBV2 869 aa29.86■■■□□ 2.37
PDLIM1-202ENST00000477757 NBPF14Q5TI25 921 aa29.86■■■□□ 2.37
PDLIM1-202ENST00000477757 CPDO75976 1380 aa29.85■■■□□ 2.37
PDLIM1-202ENST00000477757 PARP4Q9UKK3 1724 aaKnown RBP29.85■■■□□ 2.37
PDLIM1-202ENST00000477757 NUTM2GQ5VZR2 741 aa29.84■■■□□ 2.37
PDLIM1-202ENST00000477757 EVA1CP58658 441 aa29.83■■■□□ 2.37
PDLIM1-202ENST00000477757 LARP1Q6PKG0 1096 aaKnown RBP29.83■■■□□ 2.37
PDLIM1-202ENST00000477757 TCP11L2Q8N4U5 519 aa29.83■■■□□ 2.37
PDLIM1-202ENST00000477757 NINLQ9Y2I6 1382 aa29.82■■■□□ 2.36
PDLIM1-202ENST00000477757 DCAF11Q8TEB1 546 aa29.82■■■□□ 2.36
PDLIM1-202ENST00000477757 KDM2AQ9Y2K7 1162 aa29.82■■■□□ 2.36
PDLIM1-202ENST00000477757 USP19O94966 1318 aa29.81■■■□□ 2.36
PDLIM1-202ENST00000477757 STAC3Q96MF2 364 aa29.81■■■□□ 2.36
PDLIM1-202ENST00000477757 SPON1Q9HCB6 807 aa29.81■■■□□ 2.36
PDLIM1-202ENST00000477757 RGPD3A6NKT7 1758 aaPredicted RBP29.81■■■□□ 2.36
PDLIM1-202ENST00000477757 RGPD4Q7Z3J3 1758 aa29.81■■■□□ 2.36
PDLIM1-202ENST00000477757 ACEP12821 1306 aa29.79■■■□□ 2.36
PDLIM1-202ENST00000477757 THRAP3Q9Y2W1 955 aaKnown RBP29.79■■■□□ 2.36
PDLIM1-202ENST00000477757 PPP1R1BQ9UD71 204 aaPredicted RBP29.78■■■□□ 2.36
PDLIM1-202ENST00000477757 PEAK1Q9H792 1746 aa29.78■■■□□ 2.36
PDLIM1-202ENST00000477757 COL5A2P05997 1499 aaPredicted RBP29.78■■■□□ 2.36
PDLIM1-202ENST00000477757 RAB3GAP2Q9H2M9 1393 aa29.77■■■□□ 2.36
PDLIM1-202ENST00000477757 KCNQ2O43526 872 aa29.76■■■□□ 2.35
PDLIM1-202ENST00000477757 CDK19Q9BWU1 502 aa29.76■■■□□ 2.35
PDLIM1-202ENST00000477757 OVOS2A0A0G2JMS6 1433 aa29.75■■■□□ 2.35
PDLIM1-202ENST00000477757 OVOS2A0A0J9YW53 1432 aa29.75■■■□□ 2.35
PDLIM1-202ENST00000477757 C11orf95C9JLR9 678 aaPredicted RBP29.75■■■□□ 2.35
PDLIM1-202ENST00000477757 OVOS2Q6IE36 1432 aa29.75■■■□□ 2.35
PDLIM1-202ENST00000477757 CCDC61Q9Y6R9 512 aa29.75■■■□□ 2.35
PDLIM1-202ENST00000477757 PLEKHG3A1L390 1219 aa29.74■■■□□ 2.35
PDLIM1-202ENST00000477757 ABTB2Q8N961 1025 aa29.74■■■□□ 2.35
PDLIM1-202ENST00000477757 LRRC37A3O60309 1634 aa29.72■■■□□ 2.35
PDLIM1-202ENST00000477757 CRB1P82279 1406 aa29.71■■■□□ 2.35
PDLIM1-202ENST00000477757 CASZ1Q86V15 1759 aa29.71■■■□□ 2.35
PDLIM1-202ENST00000477757 DCAF8L1A6NGE4 600 aa29.69■■■□□ 2.34
PDLIM1-202ENST00000477757 SBF2Q86WG5 1849 aa29.68■■■□□ 2.34
PDLIM1-202ENST00000477757 GCP02774 474 aa29.67■■■□□ 2.34
PDLIM1-202ENST00000477757 KIAA1210Q9ULL0 1709 aa29.67■■■□□ 2.34
PDLIM1-202ENST00000477757 NLRP13Q86W25 1043 aa29.66■■■□□ 2.34
PDLIM1-202ENST00000477757 PLSCR1O15162 318 aa29.65■■■□□ 2.34
PDLIM1-202ENST00000477757 ANO8Q9HCE9 1232 aaPredicted RBP29.65■■■□□ 2.34
PDLIM1-202ENST00000477757 WNK3Q9BYP7 1800 aa29.64■■■□□ 2.33
PDLIM1-202ENST00000477757 BRD4O60885 1362 aaPredicted RBP29.64■■■□□ 2.33
PDLIM1-202ENST00000477757 PPIP5K1Q6PFW1 1433 aa29.63■■■□□ 2.33
PDLIM1-202ENST00000477757 SLIT3O75094 1523 aa29.63■■■□□ 2.33
PDLIM1-202ENST00000477757 AATKQ6ZMQ8 1374 aa29.62■■■□□ 2.33
PDLIM1-202ENST00000477757 MYOM1P52179 1685 aa29.6■■■□□ 2.33
PDLIM1-202ENST00000477757 BCL9O00512 1426 aa29.58■■■□□ 2.33
PDLIM1-202ENST00000477757 DDB1Q16531 1140 aa29.58■■■□□ 2.33
PDLIM1-202ENST00000477757 BCL11BQ9C0K0 894 aaPredicted RBP29.58■■■□□ 2.33
PDLIM1-202ENST00000477757 USP6P35125 1406 aa29.56■■■□□ 2.32
PDLIM1-202ENST00000477757 COL18A1P39060 1754 aa29.56■■■□□ 2.32
PDLIM1-202ENST00000477757 AKAP12Q02952 1782 aa29.54■■■□□ 2.32
PDLIM1-202ENST00000477757 SRPK2P78362 688 aaKnown RBP29.54■■■□□ 2.32
PDLIM1-202ENST00000477757 PTF1AQ7RTS3 328 aa29.54■■■□□ 2.32
PDLIM1-202ENST00000477757 PIK3C2AO00443 1686 aa29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms