RNA–Protein interactions for RNA: ENST00000475818.5

HDAC11-217, Transcript of histone deacetylase 11, humanhuman

TSL 3

Gene HDAC11, Length 1,271 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-217ENST00000475818 POGKQ9P215 609 aa30.31■■■□□ 2.44
HDAC11-217ENST00000475818 TRPM3Q9HCF6 1732 aaPredicted RBP30.3■■■□□ 2.44
HDAC11-217ENST00000475818 GPRASP1Q5JY77 1395 aa30.29■■■□□ 2.44
HDAC11-217ENST00000475818 ADGRB2O60241 1585 aa30.28■■■□□ 2.44
HDAC11-217ENST00000475818 APBA3O96018 575 aa30.28■■■□□ 2.44
HDAC11-217ENST00000475818 PRDM11Q9NQV5 511 aa30.28■■■□□ 2.44
HDAC11-217ENST00000475818 HIRIP3Q9BW71 556 aaPredicted RBP30.27■■■□□ 2.44
HDAC11-217ENST00000475818 ALS2Q96Q42 1657 aa30.27■■■□□ 2.44
HDAC11-217ENST00000475818 ACIN1Q9UKV3 1341 aaKnown RBP30.26■■■□□ 2.44
HDAC11-217ENST00000475818 FAM196AQ6ZSG2 479 aa30.25■■■□□ 2.43
HDAC11-217ENST00000475818 MPHOSPH9Q99550 1183 aa30.25■■■□□ 2.43
HDAC11-217ENST00000475818 SPATA31A1Q5TZJ5 1347 aa30.23■■■□□ 2.43
HDAC11-217ENST00000475818 PAK3O75914 559 aaPredicted RBP30.23■■■□□ 2.43
HDAC11-217ENST00000475818 PRR36Q9H6K5 1346 aa30.22■■■□□ 2.43
HDAC11-217ENST00000475818 STRN4Q9NRL3 753 aa30.22■■■□□ 2.43
HDAC11-217ENST00000475818 CHRNA2Q15822 529 aa30.21■■■□□ 2.43
HDAC11-217ENST00000475818 PARD3Q8TEW0 1356 aa30.2■■■□□ 2.43
HDAC11-217ENST00000475818 MINK1Q8N4C8 1332 aaPredicted RBP30.2■■■□□ 2.42
HDAC11-217ENST00000475818 DLC1Q96QB1 1528 aa30.19■■■□□ 2.42
HDAC11-217ENST00000475818 NGDNQ8NEJ9 315 aaKnown RBP30.19■■■□□ 2.42
HDAC11-217ENST00000475818 KIAA0232Q92628 1395 aa30.18■■■□□ 2.42
HDAC11-217ENST00000475818 USP35Q9P2H5 1018 aa30.18■■■□□ 2.42
HDAC11-217ENST00000475818 CRYBG1Q9Y4K1 1723 aa30.18■■■□□ 2.42
HDAC11-217ENST00000475818 PPP1R1BQ9UD71 204 aaPredicted RBP30.16■■■□□ 2.42
HDAC11-217ENST00000475818 TRAK1Q9UPV9 953 aa30.16■■■□□ 2.42
HDAC11-217ENST00000475818 NBPF8Q3BBV2 869 aa30.15■■■□□ 2.42
HDAC11-217ENST00000475818 NBPF14Q5TI25 921 aa30.15■■■□□ 2.42
HDAC11-217ENST00000475818 EIF3AQ14152 1382 aaKnown RBP30.14■■■□□ 2.41
HDAC11-217ENST00000475818 TULP4Q9NRJ4 1543 aa30.13■■■□□ 2.41
HDAC11-217ENST00000475818 PDE3BQ13370 1112 aa30.13■■■□□ 2.41
HDAC11-217ENST00000475818 RREB1Q92766 1687 aa30.13■■■□□ 2.41
HDAC11-217ENST00000475818 ZC3H6P61129 1189 aaKnown RBP30.12■■■□□ 2.41
HDAC11-217ENST00000475818 NUP188Q5SRE5 1749 aa30.12■■■□□ 2.41
HDAC11-217ENST00000475818 WASLO00401 505 aaPredicted RBP30.1■■■□□ 2.41
HDAC11-217ENST00000475818 SPON1Q9HCB6 807 aa30.1■■■□□ 2.41
HDAC11-217ENST00000475818 DCAF8L1A6NGE4 600 aa30.09■■■□□ 2.41
HDAC11-217ENST00000475818 NUTM2GQ5VZR2 741 aa30.09■■■□□ 2.41
HDAC11-217ENST00000475818 EVA1CP58658 441 aa30.07■■■□□ 2.4
HDAC11-217ENST00000475818 ADGRB1O14514 1584 aa30.07■■■□□ 2.4
HDAC11-217ENST00000475818 KCNQ2O43526 872 aa30.06■■■□□ 2.4
HDAC11-217ENST00000475818 SSH2Q76I76 1423 aa30.05■■■□□ 2.4
HDAC11-217ENST00000475818 BARGINQ6ZT62 677 aa30.05■■■□□ 2.4
HDAC11-217ENST00000475818 PHRF1Q9P1Y6 1649 aaKnown RBP30.04■■■□□ 2.4
HDAC11-217ENST00000475818 NINLQ9Y2I6 1382 aa30.03■■■□□ 2.4
HDAC11-217ENST00000475818 LARP1Q6PKG0 1096 aaKnown RBP30.02■■■□□ 2.4
HDAC11-217ENST00000475818 TCP11L2Q8N4U5 519 aa29.99■■■□□ 2.39
HDAC11-217ENST00000475818 NUDT16Q96DE0 195 aaKnown RBP29.98■■■□□ 2.39
HDAC11-217ENST00000475818 ATP7BP35670 1465 aa29.97■■■□□ 2.39
HDAC11-217ENST00000475818 CAMTA1Q9Y6Y1 1673 aa29.96■■■□□ 2.39
HDAC11-217ENST00000475818 KDM2AQ9Y2K7 1162 aa29.94■■■□□ 2.38
HDAC11-217ENST00000475818 NRKQ7Z2Y5 1582 aa29.91■■■□□ 2.38
HDAC11-217ENST00000475818 ITSN1Q15811 1721 aa29.91■■■□□ 2.38
HDAC11-217ENST00000475818 ANO8Q9HCE9 1232 aaPredicted RBP29.9■■■□□ 2.38
HDAC11-217ENST00000475818 THRAP3Q9Y2W1 955 aaKnown RBP29.88■■■□□ 2.37
HDAC11-217ENST00000475818 ACEP12821 1306 aa29.88■■■□□ 2.37
HDAC11-217ENST00000475818 ABTB2Q8N961 1025 aa29.87■■■□□ 2.37
HDAC11-217ENST00000475818 PDGFDQ9GZP0 370 aaPredicted RBP29.87■■■□□ 2.37
HDAC11-217ENST00000475818 LMO7Q8WWI1 1683 aa29.87■■■□□ 2.37
HDAC11-217ENST00000475818 DCAF11Q8TEB1 546 aa29.86■■■□□ 2.37
HDAC11-217ENST00000475818 CDK19Q9BWU1 502 aa29.86■■■□□ 2.37
HDAC11-217ENST00000475818 CPDO75976 1380 aa29.86■■■□□ 2.37
HDAC11-217ENST00000475818 ZNF784Q8NCA9 323 aaPredicted RBP29.85■■■□□ 2.37
HDAC11-217ENST00000475818 POLR3AO14802 1390 aaPredicted RBP29.85■■■□□ 2.37
HDAC11-217ENST00000475818 OVOS2A0A0G2JMS6 1433 aa29.85■■■□□ 2.37
HDAC11-217ENST00000475818 OVOS2A0A0J9YW53 1432 aa29.85■■■□□ 2.37
HDAC11-217ENST00000475818 OVOS2Q6IE36 1432 aa29.85■■■□□ 2.37
HDAC11-217ENST00000475818 ZBTB7AO95365 584 aa29.84■■■□□ 2.37
HDAC11-217ENST00000475818 PARP4Q9UKK3 1724 aaKnown RBP29.83■■■□□ 2.37
HDAC11-217ENST00000475818 ZBTB7CA1YPR0 619 aa29.83■■■□□ 2.37
HDAC11-217ENST00000475818 COL5A2P05997 1499 aaPredicted RBP29.82■■■□□ 2.36
HDAC11-217ENST00000475818 USP19O94966 1318 aa29.82■■■□□ 2.36
HDAC11-217ENST00000475818 C11orf95C9JLR9 678 aaPredicted RBP29.82■■■□□ 2.36
HDAC11-217ENST00000475818 PTF1AQ7RTS3 328 aa29.82■■■□□ 2.36
HDAC11-217ENST00000475818 PLSCR1O15162 318 aa29.81■■■□□ 2.36
HDAC11-217ENST00000475818 BCL11BQ9C0K0 894 aaPredicted RBP29.81■■■□□ 2.36
HDAC11-217ENST00000475818 CASZ1Q86V15 1759 aa29.8■■■□□ 2.36
HDAC11-217ENST00000475818 ARHGEF28Q8N1W1 1705 aaKnown RBP29.8■■■□□ 2.36
HDAC11-217ENST00000475818 PEAK1Q9H792 1746 aa29.79■■■□□ 2.36
HDAC11-217ENST00000475818 GCP02774 474 aa29.79■■■□□ 2.36
HDAC11-217ENST00000475818 ATF5Q9Y2D1 282 aaPredicted RBP29.79■■■□□ 2.36
HDAC11-217ENST00000475818 CCDC61Q9Y6R9 512 aa29.79■■■□□ 2.36
HDAC11-217ENST00000475818 CRB1P82279 1406 aa29.79■■■□□ 2.36
HDAC11-217ENST00000475818 MYOM1P52179 1685 aa29.78■■■□□ 2.36
HDAC11-217ENST00000475818 TOPAZ1Q8N9V7 1692 aa29.78■■■□□ 2.36
HDAC11-217ENST00000475818 SENP3-EIF4A1A0A087X0R7 540 aa29.77■■■□□ 2.36
HDAC11-217ENST00000475818 PLEKHG3A1L390 1219 aa29.76■■■□□ 2.35
HDAC11-217ENST00000475818 PTGER2P43116 358 aa29.76■■■□□ 2.35
HDAC11-217ENST00000475818 DDB1Q16531 1140 aa29.76■■■□□ 2.35
HDAC11-217ENST00000475818 NLRP13Q86W25 1043 aa29.76■■■□□ 2.35
HDAC11-217ENST00000475818 RGPD3A6NKT7 1758 aaPredicted RBP29.76■■■□□ 2.35
HDAC11-217ENST00000475818 RGPD4Q7Z3J3 1758 aa29.76■■■□□ 2.35
HDAC11-217ENST00000475818 LRRC37A3O60309 1634 aa29.74■■■□□ 2.35
HDAC11-217ENST00000475818 PROM2Q8N271 834 aa29.74■■■□□ 2.35
HDAC11-217ENST00000475818 FHDC1Q9C0D6 1143 aaPredicted RBP29.71■■■□□ 2.35
HDAC11-217ENST00000475818 TOM1L2Q6ZVM7 507 aa29.7■■■□□ 2.35
HDAC11-217ENST00000475818 SBF2Q86WG5 1849 aa29.7■■■□□ 2.34
HDAC11-217ENST00000475818 SYT17Q9BSW7 474 aa29.69■■■□□ 2.34
HDAC11-217ENST00000475818 STK32BQ9NY57 414 aa29.69■■■□□ 2.34
HDAC11-217ENST00000475818 MARCH10Q8NA82 808 aaPredicted RBP29.68■■■□□ 2.34
HDAC11-217ENST00000475818 PPIP5K1Q6PFW1 1433 aa29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms