RNA–Protein interactions for RNA: ENST00000475573.5

NME1-206, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 3

Gene NME1, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-206ENST00000475573 GPRASP1Q5JY77 1395 aa22.78■■□□□ 1.24
NME1-206ENST00000475573 PARD3Q8TEW0 1356 aa22.78■■□□□ 1.24
NME1-206ENST00000475573 SAFB2Q14151 953 aaKnown RBP eCLIP22.77■■□□□ 1.24
NME1-206ENST00000475573 CAMKK2Q96RR4 588 aa22.76■■□□□ 1.23
NME1-206ENST00000475573 EIF3AQ14152 1382 aaKnown RBP22.75■■□□□ 1.23
NME1-206ENST00000475573 RREB1Q92766 1687 aa22.74■■□□□ 1.23
NME1-206ENST00000475573 YY1P25490 414 aa22.74■■□□□ 1.23
NME1-206ENST00000475573 CFAP70Q5T0N1 1121 aa22.74■■□□□ 1.23
NME1-206ENST00000475573 ACIN1Q9UKV3 1341 aaKnown RBP22.74■■□□□ 1.23
NME1-206ENST00000475573 FAM196AQ6ZSG2 479 aa22.73■■□□□ 1.23
NME1-206ENST00000475573 POGKQ9P215 609 aa22.73■■□□□ 1.23
NME1-206ENST00000475573 TRIM37O94972 964 aa22.72■■□□□ 1.23
NME1-206ENST00000475573 MPHOSPH9Q99550 1183 aa22.72■■□□□ 1.23
NME1-206ENST00000475573 PRDM11Q9NQV5 511 aa22.72■■□□□ 1.23
NME1-206ENST00000475573 TULP4Q9NRJ4 1543 aa22.72■■□□□ 1.23
NME1-206ENST00000475573 SPATA31A1Q5TZJ5 1347 aa22.71■■□□□ 1.23
NME1-206ENST00000475573 NUP188Q5SRE5 1749 aa22.71■■□□□ 1.23
NME1-206ENST00000475573 APBA3O96018 575 aa22.69■■□□□ 1.22
NME1-206ENST00000475573 PRR36Q9H6K5 1346 aa22.68■■□□□ 1.22
NME1-206ENST00000475573 PHRF1Q9P1Y6 1649 aaKnown RBP22.67■■□□□ 1.22
NME1-206ENST00000475573 ADGRB1O14514 1584 aa22.67■■□□□ 1.22
NME1-206ENST00000475573 KIAA0232Q92628 1395 aa22.66■■□□□ 1.22
NME1-206ENST00000475573 HIRIP3Q9BW71 556 aaPredicted RBP22.65■■□□□ 1.22
NME1-206ENST00000475573 PAK3O75914 559 aaPredicted RBP22.64■■□□□ 1.21
NME1-206ENST00000475573 NGDNQ8NEJ9 315 aaKnown RBP22.64■■□□□ 1.21
NME1-206ENST00000475573 ITSN1Q15811 1721 aa22.64■■□□□ 1.21
NME1-206ENST00000475573 NBPF8Q3BBV2 869 aa22.63■■□□□ 1.21
NME1-206ENST00000475573 NBPF14Q5TI25 921 aa22.63■■□□□ 1.21
NME1-206ENST00000475573 MINK1Q8N4C8 1332 aaPredicted RBP22.62■■□□□ 1.21
NME1-206ENST00000475573 ATP7BP35670 1465 aa22.62■■□□□ 1.21
NME1-206ENST00000475573 STRN4Q9NRL3 753 aa22.62■■□□□ 1.21
NME1-206ENST00000475573 NINLQ9Y2I6 1382 aa22.62■■□□□ 1.21
NME1-206ENST00000475573 WASLO00401 505 aaPredicted RBP22.61■■□□□ 1.21
NME1-206ENST00000475573 CHRNA2Q15822 529 aa22.61■■□□□ 1.21
NME1-206ENST00000475573 BARGINQ6ZT62 677 aa22.61■■□□□ 1.21
NME1-206ENST00000475573 SSH2Q76I76 1423 aa22.6■■□□□ 1.21
NME1-206ENST00000475573 PDE3BQ13370 1112 aa22.6■■□□□ 1.21
NME1-206ENST00000475573 SPON1Q9HCB6 807 aa22.6■■□□□ 1.21
NME1-206ENST00000475573 PPP1R1BQ9UD71 204 aaPredicted RBP22.6■■□□□ 1.21
NME1-206ENST00000475573 TRAK1Q9UPV9 953 aa22.6■■□□□ 1.21
NME1-206ENST00000475573 DCAF8L1A6NGE4 600 aa22.59■■□□□ 1.21
NME1-206ENST00000475573 USP35Q9P2H5 1018 aa22.57■■□□□ 1.2
NME1-206ENST00000475573 KCNQ2O43526 872 aa22.56■■□□□ 1.2
NME1-206ENST00000475573 ZC3H6P61129 1189 aaKnown RBP22.55■■□□□ 1.2
NME1-206ENST00000475573 RGPD3A6NKT7 1758 aaPredicted RBP22.55■■□□□ 1.2
NME1-206ENST00000475573 RGPD4Q7Z3J3 1758 aa22.55■■□□□ 1.2
NME1-206ENST00000475573 NRKQ7Z2Y5 1582 aa22.55■■□□□ 1.2
NME1-206ENST00000475573 EVA1CP58658 441 aa22.54■■□□□ 1.2
NME1-206ENST00000475573 LMO7Q8WWI1 1683 aa22.54■■□□□ 1.2
NME1-206ENST00000475573 PARP4Q9UKK3 1724 aaKnown RBP22.54■■□□□ 1.2
NME1-206ENST00000475573 CAMTA1Q9Y6Y1 1673 aa22.53■■□□□ 1.2
NME1-206ENST00000475573 TCP11L2Q8N4U5 519 aa22.53■■□□□ 1.2
NME1-206ENST00000475573 C11orf95C9JLR9 678 aaPredicted RBP22.52■■□□□ 1.2
NME1-206ENST00000475573 ARHGEF28Q8N1W1 1705 aaKnown RBP22.51■■□□□ 1.19
NME1-206ENST00000475573 THRAP3Q9Y2W1 955 aaKnown RBP22.51■■□□□ 1.19
NME1-206ENST00000475573 CPDO75976 1380 aa22.5■■□□□ 1.19
NME1-206ENST00000475573 TOPAZ1Q8N9V7 1692 aa22.5■■□□□ 1.19
NME1-206ENST00000475573 LARP1Q6PKG0 1096 aaKnown RBP22.5■■□□□ 1.19
NME1-206ENST00000475573 NUDT16Q96DE0 195 aaKnown RBP22.5■■□□□ 1.19
NME1-206ENST00000475573 POLR3AO14802 1390 aaPredicted RBP22.49■■□□□ 1.19
NME1-206ENST00000475573 NUTM2GQ5VZR2 741 aa22.48■■□□□ 1.19
NME1-206ENST00000475573 PEAK1Q9H792 1746 aa22.48■■□□□ 1.19
NME1-206ENST00000475573 CASZ1Q86V15 1759 aa22.48■■□□□ 1.19
NME1-206ENST00000475573 OVOS2A0A0G2JMS6 1433 aa22.47■■□□□ 1.19
NME1-206ENST00000475573 OVOS2A0A0J9YW53 1432 aa22.47■■□□□ 1.19
NME1-206ENST00000475573 OVOS2Q6IE36 1432 aa22.47■■□□□ 1.19
NME1-206ENST00000475573 SBF2Q86WG5 1849 aa22.45■■□□□ 1.19
NME1-206ENST00000475573 USP19O94966 1318 aa22.45■■□□□ 1.18
NME1-206ENST00000475573 COL5A2P05997 1499 aaPredicted RBP22.44■■□□□ 1.18
NME1-206ENST00000475573 UTRNP46939 3433 aa22.44■■□□□ 1.18
NME1-206ENST00000475573 ACEP12821 1306 aa22.43■■□□□ 1.18
NME1-206ENST00000475573 LRRC37A3O60309 1634 aa22.42■■□□□ 1.18
NME1-206ENST00000475573 PLSCR1O15162 318 aa22.42■■□□□ 1.18
NME1-206ENST00000475573 ABTB2Q8N961 1025 aa22.42■■□□□ 1.18
NME1-206ENST00000475573 STAC3Q96MF2 364 aa22.42■■□□□ 1.18
NME1-206ENST00000475573 CRB1P82279 1406 aa22.41■■□□□ 1.18
NME1-206ENST00000475573 ANO8Q9HCE9 1232 aaPredicted RBP22.41■■□□□ 1.18
NME1-206ENST00000475573 MYOM1P52179 1685 aa22.4■■□□□ 1.18
NME1-206ENST00000475573 CDK19Q9BWU1 502 aa22.4■■□□□ 1.18
NME1-206ENST00000475573 KDM2AQ9Y2K7 1162 aa22.4■■□□□ 1.18
NME1-206ENST00000475573 CCDC61Q9Y6R9 512 aa22.4■■□□□ 1.18
NME1-206ENST00000475573 PLEKHG3A1L390 1219 aa22.39■■□□□ 1.17
NME1-206ENST00000475573 DCAF11Q8TEB1 546 aa22.39■■□□□ 1.17
NME1-206ENST00000475573 ZNF784Q8NCA9 323 aaPredicted RBP22.38■■□□□ 1.17
NME1-206ENST00000475573 GCP02774 474 aa22.37■■□□□ 1.17
NME1-206ENST00000475573 NLRP13Q86W25 1043 aa22.37■■□□□ 1.17
NME1-206ENST00000475573 BCL11BQ9C0K0 894 aaPredicted RBP22.36■■□□□ 1.17
NME1-206ENST00000475573 WNK3Q9BYP7 1800 aa22.36■■□□□ 1.17
NME1-206ENST00000475573 CHD4Q14839 1912 aa22.35■■□□□ 1.17
NME1-206ENST00000475573 DDB1Q16531 1140 aa22.34■■□□□ 1.17
NME1-206ENST00000475573 AKAP12Q02952 1782 aa22.34■■□□□ 1.17
NME1-206ENST00000475573 BCL9O00512 1426 aa22.33■■□□□ 1.17
NME1-206ENST00000475573 ZBTB7AO95365 584 aa22.33■■□□□ 1.17
NME1-206ENST00000475573 PTGER2P43116 358 aa22.33■■□□□ 1.17
NME1-206ENST00000475573 PDGFDQ9GZP0 370 aaPredicted RBP22.33■■□□□ 1.17
NME1-206ENST00000475573 BRD4O60885 1362 aaPredicted RBP22.32■■□□□ 1.16
NME1-206ENST00000475573 AATKQ6ZMQ8 1374 aa22.32■■□□□ 1.16
NME1-206ENST00000475573 SLIT3O75094 1523 aa22.3■■□□□ 1.16
NME1-206ENST00000475573 PTF1AQ7RTS3 328 aa22.29■■□□□ 1.16
NME1-206ENST00000475573 PROM2Q8N271 834 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms