RNA–Protein interactions for RNA: ENST00000475378.5

RNF220-212, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-212ENST00000475378 FAM182BQ5T319 152 aa26.83■■□□□ 1.89
RNF220-212ENST00000475378 R3HDM1Q15032 1099 aaKnown RBP26.82■■□□□ 1.88
RNF220-212ENST00000475378 ADGRB1O14514 1584 aa26.77■■□□□ 1.88
RNF220-212ENST00000475378 GPRASP1Q5JY77 1395 aa26.76■■□□□ 1.87
RNF220-212ENST00000475378 PRR36Q9H6K5 1346 aa26.76■■□□□ 1.87
RNF220-212ENST00000475378 ACIN1Q9UKV3 1341 aaKnown RBP26.76■■□□□ 1.87
RNF220-212ENST00000475378 EZH2Q15910 746 aaKnown RBP26.76■■□□□ 1.87
RNF220-212ENST00000475378 POGKQ9P215 609 aa26.76■■□□□ 1.87
RNF220-212ENST00000475378 TULP4Q9NRJ4 1543 aa26.75■■□□□ 1.87
RNF220-212ENST00000475378 RREB1Q92766 1687 aa26.74■■□□□ 1.87
RNF220-212ENST00000475378 CAMKK2Q96RR4 588 aa26.74■■□□□ 1.87
RNF220-212ENST00000475378 SPATA31A1Q5TZJ5 1347 aa26.71■■□□□ 1.87
RNF220-212ENST00000475378 HIRIP3Q9BW71 556 aaPredicted RBP26.71■■□□□ 1.87
RNF220-212ENST00000475378 PHRF1Q9P1Y6 1649 aaKnown RBP26.71■■□□□ 1.87
RNF220-212ENST00000475378 EIF3AQ14152 1382 aaKnown RBP26.71■■□□□ 1.87
RNF220-212ENST00000475378 NUP188Q5SRE5 1749 aa26.69■■□□□ 1.86
RNF220-212ENST00000475378 PRDM11Q9NQV5 511 aa26.69■■□□□ 1.86
RNF220-212ENST00000475378 TRIM37O94972 964 aa26.68■■□□□ 1.86
RNF220-212ENST00000475378 PARD3Q8TEW0 1356 aa26.68■■□□□ 1.86
RNF220-212ENST00000475378 ITSN1Q15811 1721 aa26.68■■□□□ 1.86
RNF220-212ENST00000475378 FAM196AQ6ZSG2 479 aa26.67■■□□□ 1.86
RNF220-212ENST00000475378 MINK1Q8N4C8 1332 aaPredicted RBP26.66■■□□□ 1.86
RNF220-212ENST00000475378 TRAK1Q9UPV9 953 aa26.66■■□□□ 1.86
RNF220-212ENST00000475378 WASLO00401 505 aaPredicted RBP26.65■■□□□ 1.86
RNF220-212ENST00000475378 KIAA0232Q92628 1395 aa26.65■■□□□ 1.86
RNF220-212ENST00000475378 PAK3O75914 559 aaPredicted RBP26.63■■□□□ 1.85
RNF220-212ENST00000475378 NGDNQ8NEJ9 315 aaKnown RBP26.63■■□□□ 1.85
RNF220-212ENST00000475378 APBA3O96018 575 aa26.62■■□□□ 1.85
RNF220-212ENST00000475378 CHRNA2Q15822 529 aa26.61■■□□□ 1.85
RNF220-212ENST00000475378 ATP7BP35670 1465 aa26.61■■□□□ 1.85
RNF220-212ENST00000475378 ARHGEF28Q8N1W1 1705 aaKnown RBP26.6■■□□□ 1.85
RNF220-212ENST00000475378 STRN4Q9NRL3 753 aa26.59■■□□□ 1.85
RNF220-212ENST00000475378 BARGINQ6ZT62 677 aa26.58■■□□□ 1.85
RNF220-212ENST00000475378 SSH2Q76I76 1423 aa26.56■■□□□ 1.84
RNF220-212ENST00000475378 YY1P25490 414 aa26.56■■□□□ 1.84
RNF220-212ENST00000475378 TOPAZ1Q8N9V7 1692 aa26.56■■□□□ 1.84
RNF220-212ENST00000475378 LMO7Q8WWI1 1683 aa26.56■■□□□ 1.84
RNF220-212ENST00000475378 NRKQ7Z2Y5 1582 aa26.55■■□□□ 1.84
RNF220-212ENST00000475378 ZC3H6P61129 1189 aaKnown RBP26.55■■□□□ 1.84
RNF220-212ENST00000475378 CAMTA1Q9Y6Y1 1673 aa26.54■■□□□ 1.84
RNF220-212ENST00000475378 USP35Q9P2H5 1018 aa26.53■■□□□ 1.84
RNF220-212ENST00000475378 PARP4Q9UKK3 1724 aaKnown RBP26.53■■□□□ 1.84
RNF220-212ENST00000475378 PDE3BQ13370 1112 aa26.52■■□□□ 1.84
RNF220-212ENST00000475378 NUDT16Q96DE0 195 aaKnown RBP26.52■■□□□ 1.84
RNF220-212ENST00000475378 POLR3AO14802 1390 aaPredicted RBP26.5■■□□□ 1.83
RNF220-212ENST00000475378 NBPF8Q3BBV2 869 aa26.5■■□□□ 1.83
RNF220-212ENST00000475378 NBPF14Q5TI25 921 aa26.5■■□□□ 1.83
RNF220-212ENST00000475378 NUTM2GQ5VZR2 741 aa26.5■■□□□ 1.83
RNF220-212ENST00000475378 SBF2Q86WG5 1849 aa26.49■■□□□ 1.83
RNF220-212ENST00000475378 RGPD3A6NKT7 1758 aaPredicted RBP26.48■■□□□ 1.83
RNF220-212ENST00000475378 RGPD4Q7Z3J3 1758 aa26.48■■□□□ 1.83
RNF220-212ENST00000475378 EVA1CP58658 441 aa26.48■■□□□ 1.83
RNF220-212ENST00000475378 LARP1Q6PKG0 1096 aaKnown RBP26.48■■□□□ 1.83
RNF220-212ENST00000475378 TCP11L2Q8N4U5 519 aa26.48■■□□□ 1.83
RNF220-212ENST00000475378 KDM2AQ9Y2K7 1162 aa26.47■■□□□ 1.83
RNF220-212ENST00000475378 PEAK1Q9H792 1746 aa26.47■■□□□ 1.83
RNF220-212ENST00000475378 CPDO75976 1380 aa26.46■■□□□ 1.83
RNF220-212ENST00000475378 SPON1Q9HCB6 807 aa26.46■■□□□ 1.83
RNF220-212ENST00000475378 DCAF11Q8TEB1 546 aa26.45■■□□□ 1.82
RNF220-212ENST00000475378 NINLQ9Y2I6 1382 aa26.45■■□□□ 1.82
RNF220-212ENST00000475378 ACEP12821 1306 aa26.44■■□□□ 1.82
RNF220-212ENST00000475378 KCNQ2O43526 872 aa26.44■■□□□ 1.82
RNF220-212ENST00000475378 USP19O94966 1318 aa26.43■■□□□ 1.82
RNF220-212ENST00000475378 CDK19Q9BWU1 502 aa26.43■■□□□ 1.82
RNF220-212ENST00000475378 THRAP3Q9Y2W1 955 aaKnown RBP26.43■■□□□ 1.82
RNF220-212ENST00000475378 CASZ1Q86V15 1759 aa26.43■■□□□ 1.82
RNF220-212ENST00000475378 STAC3Q96MF2 364 aa26.42■■□□□ 1.82
RNF220-212ENST00000475378 PLEKHG3A1L390 1219 aa26.41■■□□□ 1.82
RNF220-212ENST00000475378 PPP1R1BQ9UD71 204 aaPredicted RBP26.41■■□□□ 1.82
RNF220-212ENST00000475378 COL5A2P05997 1499 aaPredicted RBP26.41■■□□□ 1.82
RNF220-212ENST00000475378 CCDC61Q9Y6R9 512 aa26.39■■□□□ 1.82
RNF220-212ENST00000475378 LRRC37A3O60309 1634 aa26.39■■□□□ 1.81
RNF220-212ENST00000475378 RAB3GAP2Q9H2M9 1393 aa26.38■■□□□ 1.81
RNF220-212ENST00000475378 ABTB2Q8N961 1025 aa26.38■■□□□ 1.81
RNF220-212ENST00000475378 C11orf95C9JLR9 678 aaPredicted RBP26.37■■□□□ 1.81
RNF220-212ENST00000475378 WNK3Q9BYP7 1800 aa26.36■■□□□ 1.81
RNF220-212ENST00000475378 OVOS2A0A0G2JMS6 1433 aa26.36■■□□□ 1.81
RNF220-212ENST00000475378 OVOS2A0A0J9YW53 1432 aa26.36■■□□□ 1.81
RNF220-212ENST00000475378 OVOS2Q6IE36 1432 aa26.36■■□□□ 1.81
RNF220-212ENST00000475378 CRB1P82279 1406 aa26.34■■□□□ 1.81
RNF220-212ENST00000475378 PLSCR1O15162 318 aa26.34■■□□□ 1.81
RNF220-212ENST00000475378 GCP02774 474 aa26.34■■□□□ 1.81
RNF220-212ENST00000475378 UTRNP46939 3433 aa26.33■■□□□ 1.81
RNF220-212ENST00000475378 DCAF8L1A6NGE4 600 aa26.33■■□□□ 1.81
RNF220-212ENST00000475378 ANO8Q9HCE9 1232 aaPredicted RBP26.33■■□□□ 1.81
RNF220-212ENST00000475378 KIAA1210Q9ULL0 1709 aa26.33■■□□□ 1.81
RNF220-212ENST00000475378 COL18A1P39060 1754 aa26.31■■□□□ 1.8
RNF220-212ENST00000475378 NLRP13Q86W25 1043 aa26.31■■□□□ 1.8
RNF220-212ENST00000475378 MYOM1P52179 1685 aa26.3■■□□□ 1.8
RNF220-212ENST00000475378 AKAP12Q02952 1782 aa26.3■■□□□ 1.8
RNF220-212ENST00000475378 SLIT3O75094 1523 aa26.28■■□□□ 1.8
RNF220-212ENST00000475378 PTF1AQ7RTS3 328 aa26.27■■□□□ 1.8
RNF220-212ENST00000475378 PDGFDQ9GZP0 370 aaPredicted RBP26.27■■□□□ 1.8
RNF220-212ENST00000475378 PPIP5K1Q6PFW1 1433 aa26.27■■□□□ 1.8
RNF220-212ENST00000475378 AATKQ6ZMQ8 1374 aa26.26■■□□□ 1.79
RNF220-212ENST00000475378 BRD4O60885 1362 aaPredicted RBP26.25■■□□□ 1.79
RNF220-212ENST00000475378 PROM2Q8N271 834 aa26.25■■□□□ 1.79
RNF220-212ENST00000475378 BCL11BQ9C0K0 894 aaPredicted RBP26.25■■□□□ 1.79
RNF220-212ENST00000475378 BCL9O00512 1426 aa26.24■■□□□ 1.79
RNF220-212ENST00000475378 DDB1Q16531 1140 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms