RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 PPLO60437 1756 aa21.29■■□□□ 1
ATG9A-220ENST00000475339 SPATA31A1Q5TZJ5 1347 aa21.29■■□□□ 1
ATG9A-220ENST00000475339 PMFBP1Q8TBY8 1022 aa21.28■■□□□ 1
ATG9A-220ENST00000475339 RRBP1Q9P2E9 1410 aaKnown RBP21.27■■□□□ 1
ATG9A-220ENST00000475339 PRDM11Q9NQV5 511 aa21.25■□□□□ 0.99
ATG9A-220ENST00000475339 PDE3BQ13370 1112 aa21.24■□□□□ 0.99
ATG9A-220ENST00000475339 STRN4Q9NRL3 753 aa21.22■□□□□ 0.99
ATG9A-220ENST00000475339 USP35Q9P2H5 1018 aa21.22■□□□□ 0.99
ATG9A-220ENST00000475339 PDGFDQ9GZP0 370 aaPredicted RBP21.21■□□□□ 0.99
ATG9A-220ENST00000475339 KNDC1Q76NI1 1749 aa21.21■□□□□ 0.99
ATG9A-220ENST00000475339 IFT172Q9UG01 1749 aa21.21■□□□□ 0.99
ATG9A-220ENST00000475339 YTHDC2Q9H6S0 1430 aaKnown RBP21.21■□□□□ 0.99
ATG9A-220ENST00000475339 NRKQ7Z2Y5 1582 aa21.19■□□□□ 0.98
ATG9A-220ENST00000475339 CHRNA2Q15822 529 aa21.19■□□□□ 0.98
ATG9A-220ENST00000475339 ZBTB7AO95365 584 aa21.18■□□□□ 0.98
ATG9A-220ENST00000475339 SAFB2Q14151 953 aaKnown RBP eCLIP21.18■□□□□ 0.98
ATG9A-220ENST00000475339 SIRT1Q96EB6 747 aa21.18■□□□□ 0.98
ATG9A-220ENST00000475339 PTGER2P43116 358 aa21.17■□□□□ 0.98
ATG9A-220ENST00000475339 RGL3Q3MIN7 710 aa21.17■□□□□ 0.98
ATG9A-220ENST00000475339 ANO8Q9HCE9 1232 aaPredicted RBP21.17■□□□□ 0.98
ATG9A-220ENST00000475339 TRPM3Q9HCF6 1732 aaPredicted RBP21.17■□□□□ 0.98
ATG9A-220ENST00000475339 CEP350Q5VT06 3117 aa21.17■□□□□ 0.98
ATG9A-220ENST00000475339 SYT17Q9BSW7 474 aa21.16■□□□□ 0.98
ATG9A-220ENST00000475339 ALS2Q96Q42 1657 aa21.15■□□□□ 0.98
ATG9A-220ENST00000475339 GPRASP1Q5JY77 1395 aa21.15■□□□□ 0.98
ATG9A-220ENST00000475339 KIAA0232Q92628 1395 aa21.15■□□□□ 0.98
ATG9A-220ENST00000475339 BARGINQ6ZT62 677 aa21.15■□□□□ 0.98
ATG9A-220ENST00000475339 FHDC1Q9C0D6 1143 aaPredicted RBP21.14■□□□□ 0.97
ATG9A-220ENST00000475339 ATF5Q9Y2D1 282 aaPredicted RBP21.14■□□□□ 0.97
ATG9A-220ENST00000475339 ACIN1Q9UKV3 1341 aaKnown RBP21.13■□□□□ 0.97
ATG9A-220ENST00000475339 MYOM1P52179 1685 aa21.13■□□□□ 0.97
ATG9A-220ENST00000475339 PPARGC1BQ86YN6 1023 aaKnown RBP21.13■□□□□ 0.97
ATG9A-220ENST00000475339 CHD4Q14839 1912 aa21.12■□□□□ 0.97
ATG9A-220ENST00000475339 PAK3O75914 559 aaPredicted RBP21.12■□□□□ 0.97
ATG9A-220ENST00000475339 PRAM1Q96QH2 718 aa21.12■□□□□ 0.97
ATG9A-220ENST00000475339 CASZ1Q86V15 1759 aa21.12■□□□□ 0.97
ATG9A-220ENST00000475339 ANKARQ7Z5J8 1434 aa21.12■□□□□ 0.97
ATG9A-220ENST00000475339 GIGYF1O75420 1035 aaPredicted RBP21.11■□□□□ 0.97
ATG9A-220ENST00000475339 EVA1CP58658 441 aa21.11■□□□□ 0.97
ATG9A-220ENST00000475339 PIK3C2GO75747 1445 aa21.11■□□□□ 0.97
ATG9A-220ENST00000475339 ANKRD30BQ9BXX2 1392 aa21.1■□□□□ 0.97
ATG9A-220ENST00000475339 ZC3H6P61129 1189 aaKnown RBP21.1■□□□□ 0.97
ATG9A-220ENST00000475339 SLC4A1APQ9BWU0 796 aaKnown RBP21.1■□□□□ 0.97
ATG9A-220ENST00000475339 CRYBG1Q9Y4K1 1723 aa21.09■□□□□ 0.97
ATG9A-220ENST00000475339 PLSCR1O15162 318 aa21.08■□□□□ 0.97
ATG9A-220ENST00000475339 LARP1Q6PKG0 1096 aaKnown RBP21.08■□□□□ 0.97
ATG9A-220ENST00000475339 TCP11L2Q8N4U5 519 aa21.08■□□□□ 0.97
ATG9A-220ENST00000475339 SSH2Q76I76 1423 aa21.07■□□□□ 0.96
ATG9A-220ENST00000475339 BCL11BQ9C0K0 894 aaPredicted RBP21.07■□□□□ 0.96
ATG9A-220ENST00000475339 PRR36Q9H6K5 1346 aa21.05■□□□□ 0.96
ATG9A-220ENST00000475339 SPATA31E1Q6ZUB1 1445 aa21.05■□□□□ 0.96
ATG9A-220ENST00000475339 NGDNQ8NEJ9 315 aaKnown RBP21.05■□□□□ 0.96
ATG9A-220ENST00000475339 HIRIP3Q9BW71 556 aaPredicted RBP21.05■□□□□ 0.96
ATG9A-220ENST00000475339 C14orf93Q9H972 538 aaKnown RBP21.05■□□□□ 0.96
ATG9A-220ENST00000475339 POGKQ9P215 609 aa21.05■□□□□ 0.96
ATG9A-220ENST00000475339 PTF1AQ7RTS3 328 aa21.04■□□□□ 0.96
ATG9A-220ENST00000475339 PROM2Q8N271 834 aa21.04■□□□□ 0.96
ATG9A-220ENST00000475339 DHX57Q6P158 1386 aaKnown RBP21.04■□□□□ 0.96
ATG9A-220ENST00000475339 CFAP70Q5T0N1 1121 aa21.03■□□□□ 0.96
ATG9A-220ENST00000475339 NUTM2GQ5VZR2 741 aa21.02■□□□□ 0.96
ATG9A-220ENST00000475339 C11orf95C9JLR9 678 aaPredicted RBP21.01■□□□□ 0.95
ATG9A-220ENST00000475339 SGIP1Q9BQI5 828 aa21.01■□□□□ 0.95
ATG9A-220ENST00000475339 OVOS2A0A0G2JMS6 1433 aa20.99■□□□□ 0.95
ATG9A-220ENST00000475339 OVOS2A0A0J9YW53 1432 aa20.99■□□□□ 0.95
ATG9A-220ENST00000475339 OVOS2Q6IE36 1432 aa20.99■□□□□ 0.95
ATG9A-220ENST00000475339 MTFR1LQ9H019 292 aa20.99■□□□□ 0.95
ATG9A-220ENST00000475339 THRAP3Q9Y2W1 955 aaKnown RBP20.99■□□□□ 0.95
ATG9A-220ENST00000475339 DLC1Q96QB1 1528 aa20.99■□□□□ 0.95
ATG9A-220ENST00000475339 RGPD3A6NKT7 1758 aaPredicted RBP20.98■□□□□ 0.95
ATG9A-220ENST00000475339 RGPD4Q7Z3J3 1758 aa20.98■□□□□ 0.95
ATG9A-220ENST00000475339 GPR162Q16538 588 aa20.98■□□□□ 0.95
ATG9A-220ENST00000475339 STK32BQ9NY57 414 aa20.98■□□□□ 0.95
ATG9A-220ENST00000475339 MINK1Q8N4C8 1332 aaPredicted RBP20.97■□□□□ 0.95
ATG9A-220ENST00000475339 SLC15A2Q16348 729 aa20.96■□□□□ 0.95
ATG9A-220ENST00000475339 ARXQ96QS3 562 aa20.96■□□□□ 0.95
ATG9A-220ENST00000475339 PHRF1Q9P1Y6 1649 aaKnown RBP20.96■□□□□ 0.95
ATG9A-220ENST00000475339 PEAK1Q9H792 1746 aa20.95■□□□□ 0.94
ATG9A-220ENST00000475339 WASLO00401 505 aaPredicted RBP20.94■□□□□ 0.94
ATG9A-220ENST00000475339 PARP4Q9UKK3 1724 aaKnown RBP20.94■□□□□ 0.94
ATG9A-220ENST00000475339 EIF3AQ14152 1382 aaKnown RBP20.94■□□□□ 0.94
ATG9A-220ENST00000475339 TULP4Q9NRJ4 1543 aa20.94■□□□□ 0.94
ATG9A-220ENST00000475339 TXNRD1Q16881 649 aa20.93■□□□□ 0.94
ATG9A-220ENST00000475339 SBF2Q86WG5 1849 aa20.92■□□□□ 0.94
ATG9A-220ENST00000475339 GOLGB1Q14789 3259 aaKnown RBP20.92■□□□□ 0.94
ATG9A-220ENST00000475339 MAP3K5Q99683 1374 aa20.91■□□□□ 0.94
ATG9A-220ENST00000475339 TRAK1Q9UPV9 953 aa20.91■□□□□ 0.94
ATG9A-220ENST00000475339 DDB1Q16531 1140 aa20.9■□□□□ 0.94
ATG9A-220ENST00000475339 LMO7Q8WWI1 1683 aa20.89■□□□□ 0.93
ATG9A-220ENST00000475339 ATP7BP35670 1465 aa20.88■□□□□ 0.93
ATG9A-220ENST00000475339 CPDO75976 1380 aa20.88■□□□□ 0.93
ATG9A-220ENST00000475339 SHANK3Q9BYB0 1731 aa20.88■□□□□ 0.93
ATG9A-220ENST00000475339 PELP1Q8IZL8 1130 aaKnown RBP20.88■□□□□ 0.93
ATG9A-220ENST00000475339 COL5A2P05997 1499 aaPredicted RBP20.88■□□□□ 0.93
ATG9A-220ENST00000475339 MARCH10Q8NA82 808 aaPredicted RBP20.86■□□□□ 0.93
ATG9A-220ENST00000475339 CRB1P82279 1406 aa20.86■□□□□ 0.93
ATG9A-220ENST00000475339 KLHL34Q8N239 644 aa20.85■□□□□ 0.93
ATG9A-220ENST00000475339 ABTB2Q8N961 1025 aa20.85■□□□□ 0.93
ATG9A-220ENST00000475339 NUDT16Q96DE0 195 aaKnown RBP20.85■□□□□ 0.93
ATG9A-220ENST00000475339 LRRC37A3O60309 1634 aa20.85■□□□□ 0.93
ATG9A-220ENST00000475339 HSPA6P17066 643 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 849.1 ms