RNA–Protein interactions for RNA: ENST00000474543.5

NELFCD-204, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 5

Gene NELFCD, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-204ENST00000474543 CPS1P31327 1500 aa18.58■□□□□ 0.56
NELFCD-204ENST00000474543 QRICH2Q9H0J4 1663 aa18.58■□□□□ 0.56
NELFCD-204ENST00000474543 PANK1Q8TE04 598 aa18.57■□□□□ 0.56
NELFCD-204ENST00000474543 CLUAP1Q96AJ1 413 aa18.57■□□□□ 0.56
NELFCD-204ENST00000474543 SLC12A5Q9H2X9 1139 aa18.57■□□□□ 0.56
NELFCD-204ENST00000474543 C14orf93Q9H972 538 aaKnown RBP18.57■□□□□ 0.56
NELFCD-204ENST00000474543 TRAK1Q9UPV9 953 aa18.57■□□□□ 0.56
NELFCD-204ENST00000474543 COG6Q9Y2V7 657 aa18.57■□□□□ 0.56
NELFCD-204ENST00000474543 RUNDC1Q96C34 613 aa18.56■□□□□ 0.56
NELFCD-204ENST00000474543 CANXP27824 592 aaKnown RBP18.56■□□□□ 0.56
NELFCD-204ENST00000474543 PROSER2Q86WR7 435 aaPredicted RBP18.56■□□□□ 0.56
NELFCD-204ENST00000474543 SETD1AO15047 1707 aaKnown RBP18.55■□□□□ 0.56
NELFCD-204ENST00000474543 PTPRUQ92729 1446 aa18.55■□□□□ 0.56
NELFCD-204ENST00000474543 TNNT2P45379 298 aaPredicted RBP18.55■□□□□ 0.56
NELFCD-204ENST00000474543 TMEM132EQ6IEE7 984 aa18.55■□□□□ 0.56
NELFCD-204ENST00000474543 PHF23Q9BUL5 403 aaPredicted RBP18.55■□□□□ 0.56
NELFCD-204ENST00000474543 IQSEC2Q5JU85 1478 aa18.55■□□□□ 0.56
NELFCD-204ENST00000474543 ADGRB1O14514 1584 aa18.55■□□□□ 0.56
NELFCD-204ENST00000474543 NWD1Q149M9 1564 aa18.54■□□□□ 0.56
NELFCD-204ENST00000474543 GSE1Q14687 1217 aa18.54■□□□□ 0.56
NELFCD-204ENST00000474543 NEUROD2Q15784 382 aa18.54■□□□□ 0.56
NELFCD-204ENST00000474543 IL27Q8NEV9 243 aa18.54■□□□□ 0.56
NELFCD-204ENST00000474543 RRP7AQ9Y3A4 280 aaKnown RBP18.54■□□□□ 0.56
NELFCD-204ENST00000474543 TCP11L2Q8N4U5 519 aa18.54■□□□□ 0.56
NELFCD-204ENST00000474543 USP32Q8NFA0 1604 aa18.54■□□□□ 0.56
NELFCD-204ENST00000474543 RARSP54136 660 aaKnown RBP18.53■□□□□ 0.56
NELFCD-204ENST00000474543 USP19O94966 1318 aa18.53■□□□□ 0.56
NELFCD-204ENST00000474543 FRAT1Q92837 279 aaPredicted RBP18.52■□□□□ 0.56
NELFCD-204ENST00000474543 RBM33Q96EV2 1170 aaKnown RBP18.52■□□□□ 0.56
NELFCD-204ENST00000474543 STK26Q9P289 416 aa18.52■□□□□ 0.56
NELFCD-204ENST00000474543 MAPK8IP3Q9UPT6 1336 aa18.52■□□□□ 0.56
NELFCD-204ENST00000474543 LRRC7Q96NW7 1537 aa18.52■□□□□ 0.56
NELFCD-204ENST00000474543 WDR63Q8IWG1 891 aa18.51■□□□□ 0.55
NELFCD-204ENST00000474543 MTHFSP49914 203 aa18.5■□□□□ 0.55
NELFCD-204ENST00000474543 TMEM94Q12767 1356 aa18.5■□□□□ 0.55
NELFCD-204ENST00000474543 XRN1Q8IZH2 1706 aaKnown RBP18.49■□□□□ 0.55
NELFCD-204ENST00000474543 CCDC27Q2M243 656 aa18.49■□□□□ 0.55
NELFCD-204ENST00000474543 SEC24BO95487 1268 aa18.48■□□□□ 0.55
NELFCD-204ENST00000474543 AAMPQ13685 434 aa18.48■□□□□ 0.55
NELFCD-204ENST00000474543 C14orf37Q86TY3 774 aa18.48■□□□□ 0.55
NELFCD-204ENST00000474543 RLBP1P12271 317 aa18.47■□□□□ 0.55
NELFCD-204ENST00000474543 PMFBP1Q8TBY8 1022 aa18.47■□□□□ 0.55
NELFCD-204ENST00000474543 YTHDC2Q9H6S0 1430 aaKnown RBP18.47■□□□□ 0.55
NELFCD-204ENST00000474543 CFAP53Q96M91 514 aa18.47■□□□□ 0.55
NELFCD-204ENST00000474543 TNNQ9UQP3 1299 aa18.47■□□□□ 0.55
NELFCD-204ENST00000474543 PCDHB15Q9Y5E8 787 aa18.47■□□□□ 0.55
NELFCD-204ENST00000474543 FRAT2O75474 233 aaPredicted RBP18.46■□□□□ 0.55
NELFCD-204ENST00000474543 ROBO2Q9HCK4 1378 aa18.45■□□□□ 0.54
NELFCD-204ENST00000474543 XIRP1Q702N8 1843 aaKnown RBP18.45■□□□□ 0.54
NELFCD-204ENST00000474543 PUS7Q96PZ0 661 aaKnown RBP18.45■□□□□ 0.54
NELFCD-204ENST00000474543 ABCC11Q96J66 1382 aa18.44■□□□□ 0.54
NELFCD-204ENST00000474543 NCBP3Q53F19 620 aaKnown RBP18.44■□□□□ 0.54
NELFCD-204ENST00000474543 PTCH1Q13635 1447 aa18.44■□□□□ 0.54
NELFCD-204ENST00000474543 BCL2L13Q9BXK5 485 aa18.44■□□□□ 0.54
NELFCD-204ENST00000474543 ARHGEF28Q8N1W1 1705 aaKnown RBP18.43■□□□□ 0.54
NELFCD-204ENST00000474543 TULP4Q9NRJ4 1543 aa18.43■□□□□ 0.54
NELFCD-204ENST00000474543 ANKRD36BQ8N2N9 1353 aa18.43■□□□□ 0.54
NELFCD-204ENST00000474543 EVC2Q86UK5 1308 aa18.42■□□□□ 0.54
NELFCD-204ENST00000474543 NSD2O96028 1365 aa18.42■□□□□ 0.54
NELFCD-204ENST00000474543 UBAP1LF5GYI3 381 aa18.42■□□□□ 0.54
NELFCD-204ENST00000474543 WAPLQ7Z5K2 1190 aa18.42■□□□□ 0.54
NELFCD-204ENST00000474543 MYH16Q9H6N6 1097 aa18.42■□□□□ 0.54
NELFCD-204ENST00000474543 TECPR2O15040 1411 aa18.42■□□□□ 0.54
NELFCD-204ENST00000474543 MSH6P52701 1360 aa18.41■□□□□ 0.54
NELFCD-204ENST00000474543 ADGRB2O60241 1585 aa18.41■□□□□ 0.54
NELFCD-204ENST00000474543 KNDC1Q76NI1 1749 aa18.41■□□□□ 0.54
NELFCD-204ENST00000474543 NCOA3Q9Y6Q9 1424 aa18.41■□□□□ 0.54
NELFCD-204ENST00000474543 RTN4Q9NQC3 1192 aaKnown RBP18.4■□□□□ 0.54
NELFCD-204ENST00000474543 PDZRN3Q9UPQ7 1066 aa18.4■□□□□ 0.54
NELFCD-204ENST00000474543 U2AF1L5P0DN76 240 aaPredicted RBP18.4■□□□□ 0.54
NELFCD-204ENST00000474543 U2AF1Q01081 240 aaKnown RBP eCLIP18.4■□□□□ 0.543e-8■□□□□ 9.2
NELFCD-204ENST00000474543 TOM1O60784 492 aa18.39■□□□□ 0.53
NELFCD-204ENST00000474543 C19orf44Q9H6X5 657 aa18.39■□□□□ 0.53
NELFCD-204ENST00000474543 POGKQ9P215 609 aa18.39■□□□□ 0.53
NELFCD-204ENST00000474543 BRPF3Q9ULD4 1205 aa18.39■□□□□ 0.53
NELFCD-204ENST00000474543 SIRT1Q96EB6 747 aa18.39■□□□□ 0.53
NELFCD-204ENST00000474543 PRAM1Q96QH2 718 aa18.39■□□□□ 0.53
NELFCD-204ENST00000474543 RWDD1Q9H446 243 aaPredicted RBP18.39■□□□□ 0.53
NELFCD-204ENST00000474543 SAFB2Q14151 953 aaKnown RBP eCLIP18.38■□□□□ 0.53
NELFCD-204ENST00000474543 BECN1Q14457 450 aa18.38■□□□□ 0.53
NELFCD-204ENST00000474543 CABP2Q9NPB3 220 aa18.37■□□□□ 0.53
NELFCD-204ENST00000474543 FAM135BQ49AJ0 1406 aa18.37■□□□□ 0.53
NELFCD-204ENST00000474543 ATF3P18847 181 aa18.37■□□□□ 0.53
NELFCD-204ENST00000474543 MVPQ14764 893 aaKnown RBP18.37■□□□□ 0.53
NELFCD-204ENST00000474543 FBXO41Q8TF61 875 aa18.36■□□□□ 0.53
NELFCD-204ENST00000474543 DLC1Q96QB1 1528 aa18.36■□□□□ 0.53
NELFCD-204ENST00000474543 ADGRL3Q9HAR2 1447 aa18.35■□□□□ 0.53
NELFCD-204ENST00000474543 ZKSCAN2Q63HK3 967 aa18.35■□□□□ 0.53
NELFCD-204ENST00000474543 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.35■□□□□ 0.53
NELFCD-204ENST00000474543 TBC1D32Q96NH3 1257 aa18.35■□□□□ 0.53
NELFCD-204ENST00000474543 CT47B1P0C2W7 299 aaPredicted RBP18.34■□□□□ 0.53
NELFCD-204ENST00000474543 PIP4K2BP78356 416 aa18.34■□□□□ 0.53
NELFCD-204ENST00000474543 CADPS2Q86UW7 1296 aa18.34■□□□□ 0.53
NELFCD-204ENST00000474543 NALCNQ8IZF0 1738 aa18.34■□□□□ 0.53
NELFCD-204ENST00000474543 DZIP1LQ8IYY4 767 aaKnown RBP18.33■□□□□ 0.53
NELFCD-204ENST00000474543 PLEKHF1Q96S99 279 aa18.33■□□□□ 0.53
NELFCD-204ENST00000474543 UPF2Q9HAU5 1272 aaKnown RBP18.33■□□□□ 0.53
NELFCD-204ENST00000474543 TSR2Q969E8 191 aaKnown RBP18.33■□□□□ 0.52
NELFCD-204ENST00000474543 A0A1W2PP64 1363 aa18.33■□□□□ 0.52
NELFCD-204ENST00000474543 FTSJ3Q8IY81 847 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms