RNA–Protein interactions for RNA: ENST00000474309.1

EXOSC1-207, Transcript of exosome component 1, humanhuman

TSL 5

Gene EXOSC1, Length 260 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-207ENST00000474309 SPATA31A7Q8IWB4 1347 aa16.93■□□□□ 0.3
EXOSC1-207ENST00000474309 A0A0G2JS52 829 aa16.92■□□□□ 0.3
EXOSC1-207ENST00000474309 HRCP23327 699 aa16.92■□□□□ 0.3
EXOSC1-207ENST00000474309 MYT1Q01538 1121 aa16.92■□□□□ 0.3
EXOSC1-207ENST00000474309 ALS2Q96Q42 1657 aa16.91■□□□□ 0.3
EXOSC1-207ENST00000474309 TULP4Q9NRJ4 1543 aa16.91■□□□□ 0.3
EXOSC1-207ENST00000474309 COL14A1Q05707 1796 aaKnown RBP16.91■□□□□ 0.3
EXOSC1-207ENST00000474309 NRAPQ86VF7 1730 aa16.9■□□□□ 0.3
EXOSC1-207ENST00000474309 PAK3O75914 559 aaPredicted RBP16.89■□□□□ 0.29
EXOSC1-207ENST00000474309 NUDT16Q96DE0 195 aaKnown RBP16.88■□□□□ 0.29
EXOSC1-207ENST00000474309 PRDM11Q9NQV5 511 aa16.88■□□□□ 0.29
EXOSC1-207ENST00000474309 EN1Q05925 392 aaPredicted RBP16.86■□□□□ 0.29
EXOSC1-207ENST00000474309 LRP5O75197 1615 aa16.85■□□□□ 0.29
EXOSC1-207ENST00000474309 SPATA31A1Q5TZJ5 1347 aa16.85■□□□□ 0.29
EXOSC1-207ENST00000474309 FAM196AQ6ZSG2 479 aa16.84■□□□□ 0.29
EXOSC1-207ENST00000474309 CDK19Q9BWU1 502 aa16.84■□□□□ 0.29
EXOSC1-207ENST00000474309 DISP2A7MBM2 1401 aa16.84■□□□□ 0.29
EXOSC1-207ENST00000474309 PLEKHG3A1L390 1219 aa16.83■□□□□ 0.28
EXOSC1-207ENST00000474309 PSDA5PKW4 1024 aaPredicted RBP16.83■□□□□ 0.28
EXOSC1-207ENST00000474309 NBPF8Q3BBV2 869 aa16.83■□□□□ 0.28
EXOSC1-207ENST00000474309 FAM182BQ5T319 152 aa16.83■□□□□ 0.28
EXOSC1-207ENST00000474309 CRYBG1Q9Y4K1 1723 aa16.83■□□□□ 0.28
EXOSC1-207ENST00000474309 CCDC61Q9Y6R9 512 aa16.83■□□□□ 0.28
EXOSC1-207ENST00000474309 RGPD1P0DJD0 1748 aa16.82■□□□□ 0.28
EXOSC1-207ENST00000474309 KIAA0232Q92628 1395 aa16.82■□□□□ 0.28
EXOSC1-207ENST00000474309 THSD7AQ9UPZ6 1657 aa16.81■□□□□ 0.28
EXOSC1-207ENST00000474309 ATP7BP35670 1465 aa16.81■□□□□ 0.28
EXOSC1-207ENST00000474309 POLR3AO14802 1390 aaPredicted RBP16.81■□□□□ 0.28
EXOSC1-207ENST00000474309 BARGINQ6ZT62 677 aa16.81■□□□□ 0.28
EXOSC1-207ENST00000474309 ITSN1Q15811 1721 aa16.81■□□□□ 0.28
EXOSC1-207ENST00000474309 ACEP12821 1306 aa16.8■□□□□ 0.28
EXOSC1-207ENST00000474309 ZC3H6P61129 1189 aaKnown RBP16.8■□□□□ 0.28
EXOSC1-207ENST00000474309 CHRNA2Q15822 529 aa16.8■□□□□ 0.28
EXOSC1-207ENST00000474309 CAMKK2Q96RR4 588 aa16.8■□□□□ 0.28
EXOSC1-207ENST00000474309 ARHGEF28Q8N1W1 1705 aaKnown RBP16.79■□□□□ 0.28
EXOSC1-207ENST00000474309 EVA1CP58658 441 aa16.79■□□□□ 0.28
EXOSC1-207ENST00000474309 EZH2Q15910 746 aaKnown RBP16.79■□□□□ 0.28
EXOSC1-207ENST00000474309 STRN4Q9NRL3 753 aa16.79■□□□□ 0.28
EXOSC1-207ENST00000474309 R3HDM1Q15032 1099 aaKnown RBP16.78■□□□□ 0.28
EXOSC1-207ENST00000474309 TRIM37O94972 964 aa16.77■□□□□ 0.28
EXOSC1-207ENST00000474309 ABTB2Q8N961 1025 aa16.77■□□□□ 0.28
EXOSC1-207ENST00000474309 PARD3Q8TEW0 1356 aa16.77■□□□□ 0.27
EXOSC1-207ENST00000474309 APBA3O96018 575 aa16.76■□□□□ 0.27
EXOSC1-207ENST00000474309 PDE3BQ13370 1112 aa16.76■□□□□ 0.27
EXOSC1-207ENST00000474309 NUTM2GQ5VZR2 741 aa16.76■□□□□ 0.27
EXOSC1-207ENST00000474309 NLRP13Q86W25 1043 aa16.76■□□□□ 0.27
EXOSC1-207ENST00000474309 THRAP3Q9Y2W1 955 aaKnown RBP16.76■□□□□ 0.27
EXOSC1-207ENST00000474309 CPDO75976 1380 aa16.76■□□□□ 0.27
EXOSC1-207ENST00000474309 TCP11L2Q8N4U5 519 aa16.75■□□□□ 0.27
EXOSC1-207ENST00000474309 BRD4O60885 1362 aaPredicted RBP16.75■□□□□ 0.27
EXOSC1-207ENST00000474309 TNS1Q9HBL0 1735 aaKnown RBP16.74■□□□□ 0.27
EXOSC1-207ENST00000474309 SSH2Q76I76 1423 aa16.74■□□□□ 0.27
EXOSC1-207ENST00000474309 C11orf95C9JLR9 678 aaPredicted RBP16.74■□□□□ 0.27
EXOSC1-207ENST00000474309 PHRF1Q9P1Y6 1649 aaKnown RBP16.74■□□□□ 0.27
EXOSC1-207ENST00000474309 KIAA1210Q9ULL0 1709 aa16.73■□□□□ 0.27
EXOSC1-207ENST00000474309 USP19O94966 1318 aa16.73■□□□□ 0.27
EXOSC1-207ENST00000474309 GCP02774 474 aa16.73■□□□□ 0.27
EXOSC1-207ENST00000474309 LARP1Q6PKG0 1096 aaKnown RBP16.73■□□□□ 0.27
EXOSC1-207ENST00000474309 USP35Q9P2H5 1018 aa16.73■□□□□ 0.27
EXOSC1-207ENST00000474309 NBPF1Q3BBV0 1214 aa16.72■□□□□ 0.27
EXOSC1-207ENST00000474309 CAMTA1Q9Y6Y1 1673 aa16.72■□□□□ 0.27
EXOSC1-207ENST00000474309 NBPF14Q5TI25 921 aa16.71■□□□□ 0.27
EXOSC1-207ENST00000474309 TOPAZ1Q8N9V7 1692 aa16.71■□□□□ 0.27
EXOSC1-207ENST00000474309 SRPK2P78362 688 aaKnown RBP16.7■□□□□ 0.26
EXOSC1-207ENST00000474309 CENPJQ9HC77 1338 aaPredicted RBP16.69■□□□□ 0.26
EXOSC1-207ENST00000474309 LMO7Q8WWI1 1683 aa16.68■□□□□ 0.26
EXOSC1-207ENST00000474309 CABP2Q9NPB3 220 aa16.67■□□□□ 0.26
EXOSC1-207ENST00000474309 PPIP5K1Q6PFW1 1433 aa16.67■□□□□ 0.26
EXOSC1-207ENST00000474309 NRKQ7Z2Y5 1582 aa16.67■□□□□ 0.26
EXOSC1-207ENST00000474309 NLRP6P59044 892 aa16.66■□□□□ 0.26
EXOSC1-207ENST00000474309 CABP1Q9NZU7 370 aa16.65■□□□□ 0.26
EXOSC1-207ENST00000474309 AATKQ6ZMQ8 1374 aa16.64■□□□□ 0.26
EXOSC1-207ENST00000474309 CRB1P82279 1406 aa16.64■□□□□ 0.25
EXOSC1-207ENST00000474309 PLSCR1O15162 318 aa16.64■□□□□ 0.25
EXOSC1-207ENST00000474309 COL5A2P05997 1499 aaPredicted RBP16.63■□□□□ 0.25
EXOSC1-207ENST00000474309 ZNF692Q9BU19 519 aaPredicted RBP16.63■□□□□ 0.25
EXOSC1-207ENST00000474309 RREB1Q92766 1687 aa16.62■□□□□ 0.25
EXOSC1-207ENST00000474309 PARP4Q9UKK3 1724 aaKnown RBP16.62■□□□□ 0.25
EXOSC1-207ENST00000474309 USP6P35125 1406 aa16.62■□□□□ 0.25
EXOSC1-207ENST00000474309 CDCA7Q9BWT1 371 aaPredicted RBP16.61■□□□□ 0.25
EXOSC1-207ENST00000474309 SPON1Q9HCB6 807 aa16.61■□□□□ 0.25
EXOSC1-207ENST00000474309 NUP188Q5SRE5 1749 aa16.6■□□□□ 0.25
EXOSC1-207ENST00000474309 KCNQ2O43526 872 aa16.6■□□□□ 0.25
EXOSC1-207ENST00000474309 DDB1Q16531 1140 aa16.6■□□□□ 0.25
EXOSC1-207ENST00000474309 EVC2Q86UK5 1308 aa16.6■□□□□ 0.25
EXOSC1-207ENST00000474309 OVOS2A0A0G2JMS6 1433 aa16.6■□□□□ 0.25
EXOSC1-207ENST00000474309 OVOS2A0A0J9YW53 1432 aa16.6■□□□□ 0.25
EXOSC1-207ENST00000474309 OVOS2Q6IE36 1432 aa16.6■□□□□ 0.25
EXOSC1-207ENST00000474309 TOM1L2Q6ZVM7 507 aa16.59■□□□□ 0.25
EXOSC1-207ENST00000474309 BCL11BQ9C0K0 894 aaPredicted RBP16.59■□□□□ 0.25
EXOSC1-207ENST00000474309 ARHGEF25Q86VW2 580 aa16.58■□□□□ 0.24
EXOSC1-207ENST00000474309 KCNH5Q8NCM2 988 aa16.58■□□□□ 0.24
EXOSC1-207ENST00000474309 AXIN2Q9Y2T1 843 aa16.58■□□□□ 0.24
EXOSC1-207ENST00000474309 SLIT3O75094 1523 aa16.58■□□□□ 0.24
EXOSC1-207ENST00000474309 BCL9O00512 1426 aa16.57■□□□□ 0.24
EXOSC1-207ENST00000474309 WDR17Q8IZU2 1322 aa16.57■□□□□ 0.24
EXOSC1-207ENST00000474309 ZBTB7CA1YPR0 619 aa16.57■□□□□ 0.24
EXOSC1-207ENST00000474309 L3MBTL2Q969R5 705 aa16.57■□□□□ 0.24
EXOSC1-207ENST00000474309 SBF2Q86WG5 1849 aa16.56■□□□□ 0.24
EXOSC1-207ENST00000474309 COL18A1P39060 1754 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms