RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 PRDM2Q13029 1718 aa10.21□□□□□ -0.77
GPNMB-209ENST00000474157 A6NJR5 290 aa10.21□□□□□ -0.77
GPNMB-209ENST00000474157 C6orf229H3BNL8 230 aa10.21□□□□□ -0.77
GPNMB-209ENST00000474157 SOCS7O14512 581 aa10.21□□□□□ -0.77
GPNMB-209ENST00000474157 POM121Q96HA1 1249 aa10.21□□□□□ -0.77
GPNMB-209ENST00000474157 PRR14Q9BWN1 585 aa10.21□□□□□ -0.77
GPNMB-209ENST00000474157 KDM6BO15054 1643 aa10.2□□□□□ -0.78
GPNMB-209ENST00000474157 USP17L8P0C7I0 530 aa10.2□□□□□ -0.78
GPNMB-209ENST00000474157 MORN1Q5T089 497 aa10.2□□□□□ -0.78
GPNMB-209ENST00000474157 HOMEZQ8IX15 550 aa10.2□□□□□ -0.78
GPNMB-209ENST00000474157 MTMR14Q8NCE2 650 aa10.2□□□□□ -0.78
GPNMB-209ENST00000474157 HECW2Q9P2P5 1572 aa10.2□□□□□ -0.78
GPNMB-209ENST00000474157 TSR3Q9UJK0 312 aaKnown RBP10.2□□□□□ -0.78
GPNMB-209ENST00000474157 RAD21O60216 631 aa10.19□□□□□ -0.78
GPNMB-209ENST00000474157 PDE4CQ08493 712 aa10.19□□□□□ -0.78
GPNMB-209ENST00000474157 SYMPKQ92797 1274 aaKnown RBP10.19□□□□□ -0.78
GPNMB-209ENST00000474157 ADGRL1O94910 1474 aa10.18□□□□□ -0.78
GPNMB-209ENST00000474157 APLP1P51693 650 aa10.18□□□□□ -0.78
GPNMB-209ENST00000474157 CCER1Q8TC90 406 aaPredicted RBP10.18□□□□□ -0.78
GPNMB-209ENST00000474157 TSC1Q92574 1164 aa10.18□□□□□ -0.78
GPNMB-209ENST00000474157 SLC27A5Q9Y2P5 690 aa10.18□□□□□ -0.78
GPNMB-209ENST00000474157 COG6Q9Y2V7 657 aa10.18□□□□□ -0.78
GPNMB-209ENST00000474157 SALL2Q9Y467 1007 aaPredicted RBP10.18□□□□□ -0.78
GPNMB-209ENST00000474157 FGD5Q6ZNL6 1462 aa10.17□□□□□ -0.78
GPNMB-209ENST00000474157 KIF13AQ9H1H9 1805 aa10.17□□□□□ -0.78
GPNMB-209ENST00000474157 CFAP99D6REC4 459 aa10.17□□□□□ -0.78
GPNMB-209ENST00000474157 HELBQ8NG08 1087 aaPredicted RBP10.17□□□□□ -0.78
GPNMB-209ENST00000474157 PROSER2Q86WR7 435 aaPredicted RBP10.16□□□□□ -0.78
GPNMB-209ENST00000474157 CEP170Q5SW79 1584 aa10.16□□□□□ -0.78
GPNMB-209ENST00000474157 FANCIQ9NVI1 1328 aa10.15□□□□□ -0.78
GPNMB-209ENST00000474157 ARID3CA6NKF2 412 aa10.15□□□□□ -0.78
GPNMB-209ENST00000474157 TRAK2O60296 914 aa10.15□□□□□ -0.78
GPNMB-209ENST00000474157 DEKP35659 375 aaKnown RBP10.15□□□□□ -0.78
GPNMB-209ENST00000474157 CTDSPL2Q05D32 466 aa10.15□□□□□ -0.78
GPNMB-209ENST00000474157 TAF7LQ5H9L4 462 aa10.15□□□□□ -0.78
GPNMB-209ENST00000474157 WBP1LQ9NX94 342 aa10.15□□□□□ -0.78
GPNMB-209ENST00000474157 PCDHB3Q9Y5E6 796 aa10.15□□□□□ -0.78
GPNMB-209ENST00000474157 Q3C1V9 767 aa10.14□□□□□ -0.79
GPNMB-209ENST00000474157 ZNF326Q5BKZ1 582 aaKnown RBP10.14□□□□□ -0.79
GPNMB-209ENST00000474157 THSD4Q6ZMP0 1018 aa10.14□□□□□ -0.79
GPNMB-209ENST00000474157 RETREG3Q86VR2 466 aa10.14□□□□□ -0.79
GPNMB-209ENST00000474157 PRR7Q8TB68 274 aa10.14□□□□□ -0.79
GPNMB-209ENST00000474157 KCTD12Q96CX2 325 aaKnown RBP10.14□□□□□ -0.79
GPNMB-209ENST00000474157 YTHDC1Q96MU7 727 aaKnown RBP10.14□□□□□ -0.79
GPNMB-209ENST00000474157 GRIN2AQ12879 1464 aa10.13□□□□□ -0.79
GPNMB-209ENST00000474157 APBB1O00213 710 aa10.13□□□□□ -0.79
GPNMB-209ENST00000474157 BLOC1S3Q6QNY0 202 aa10.13□□□□□ -0.79
GPNMB-209ENST00000474157 POTEGQ6S5H5 508 aa10.13□□□□□ -0.79
GPNMB-209ENST00000474157 RNF19BQ6ZMZ0 732 aa10.13□□□□□ -0.79
GPNMB-209ENST00000474157 C1orf115Q9H7X2 142 aa10.13□□□□□ -0.79
GPNMB-209ENST00000474157 GDPD2Q9HCC8 539 aa10.13□□□□□ -0.79
GPNMB-209ENST00000474157 SUPT16HQ9Y5B9 1047 aaKnown RBP10.13□□□□□ -0.79
GPNMB-209ENST00000474157 NUP160Q12769 1436 aa10.13□□□□□ -0.79
GPNMB-209ENST00000474157 PRG4Q92954 1404 aaPredicted RBP10.13□□□□□ -0.79
GPNMB-209ENST00000474157 ILDR2Q71H61 639 aa10.12□□□□□ -0.79
GPNMB-209ENST00000474157 CDAN1Q8IWY9 1227 aa10.12□□□□□ -0.79
GPNMB-209ENST00000474157 HMX1Q9NP08 348 aaPredicted RBP10.12□□□□□ -0.79
GPNMB-209ENST00000474157 MAPKBP1O60336 1514 aa10.12□□□□□ -0.79
GPNMB-209ENST00000474157 FGD1P98174 961 aa10.11□□□□□ -0.79
GPNMB-209ENST00000474157 FNBP4Q8N3X1 1017 aaPredicted RBP10.11□□□□□ -0.79
GPNMB-209ENST00000474157 LRRN4Q8WUT4 740 aa10.11□□□□□ -0.79
GPNMB-209ENST00000474157 TBC1D2BQ9UPU7 963 aa10.11□□□□□ -0.79
GPNMB-209ENST00000474157 DIP2BQ9P265 1576 aa10.1□□□□□ -0.79
GPNMB-209ENST00000474157 POTEMA6NI47 508 aa10.1□□□□□ -0.79
GPNMB-209ENST00000474157 NR1I2O75469 434 aa10.1□□□□□ -0.79
GPNMB-209ENST00000474157 SCUBE3Q8IX30 993 aa10.1□□□□□ -0.79
GPNMB-209ENST00000474157 GJD4Q96KN9 370 aaPredicted RBP10.1□□□□□ -0.79
GPNMB-209ENST00000474157 PRM3Q9NNZ6 103 aa10.1□□□□□ -0.79
GPNMB-209ENST00000474157 ABL2P42684 1182 aa10.09□□□□□ -0.79
GPNMB-209ENST00000474157 BRICD5Q6PL45 260 aa10.08□□□□□ -0.8
GPNMB-209ENST00000474157 USB1Q9BQ65 265 aaKnown RBP10.08□□□□□ -0.8
GPNMB-209ENST00000474157 DISP3Q9P2K9 1392 aa10.08□□□□□ -0.8
GPNMB-209ENST00000474157 PER1O15534 1290 aaPredicted RBP10.07□□□□□ -0.8
GPNMB-209ENST00000474157 FMNL1O95466 1100 aaPredicted RBP10.07□□□□□ -0.8
GPNMB-209ENST00000474157 THAP11Q96EK4 314 aa10.07□□□□□ -0.8
GPNMB-209ENST00000474157 TRIM34Q9BYJ4 488 aa10.07□□□□□ -0.8
GPNMB-209ENST00000474157 NDUFB9Q9Y6M9 179 aa10.07□□□□□ -0.8
GPNMB-209ENST00000474157 COPS2P61201 443 aa10.06□□□□□ -0.8
GPNMB-209ENST00000474157 ARID3AQ99856 593 aa10.06□□□□□ -0.8
GPNMB-209ENST00000474157 ZNF777Q9ULD5 760 aaPredicted RBP10.06□□□□□ -0.8
GPNMB-209ENST00000474157 DESI1Q6ICB0 168 aa10.05□□□□□ -0.8
GPNMB-209ENST00000474157 WWC1Q8IX03 1113 aa10.05□□□□□ -0.8
GPNMB-209ENST00000474157 ZNF330Q9Y3S2 320 aaPredicted RBP10.05□□□□□ -0.8
GPNMB-209ENST00000474157 CUX1P39880 1505 aa10.05□□□□□ -0.8
GPNMB-209ENST00000474157 SHROOM2Q13796 1616 aa10.04□□□□□ -0.8
GPNMB-209ENST00000474157 PTPN5P54829 565 aa10.04□□□□□ -0.8
GPNMB-209ENST00000474157 EPS8L1Q8TE68 723 aa10.04□□□□□ -0.8
GPNMB-209ENST00000474157 RBM19Q9Y4C8 960 aaKnown RBP10.04□□□□□ -0.8
GPNMB-209ENST00000474157 FHAD1B1AJZ9 1412 aa10.04□□□□□ -0.8
GPNMB-209ENST00000474157 ABCA10Q8WWZ4 1543 aa10.03□□□□□ -0.8
GPNMB-209ENST00000474157 NYAP1Q6ZVC0 841 aa10.03□□□□□ -0.8
GPNMB-209ENST00000474157 NR6A1Q15406 480 aa10.02□□□□□ -0.81
GPNMB-209ENST00000474157 LYPD8Q6UX82 237 aa10.02□□□□□ -0.81
GPNMB-209ENST00000474157 GPR37L1O60883 481 aa10.01□□□□□ -0.81
GPNMB-209ENST00000474157 JUNDP17535 347 aa10.01□□□□□ -0.81
GPNMB-209ENST00000474157 IRF5Q13568 498 aa10.01□□□□□ -0.81
GPNMB-209ENST00000474157 CCDC82Q8N4S0 544 aa10.01□□□□□ -0.81
GPNMB-209ENST00000474157 SPSB2Q99619 263 aa10.01□□□□□ -0.81
GPNMB-209ENST00000474157 PBRM1Q86U86 1689 aa10□□□□□ -0.81
GPNMB-209ENST00000474157 TLL1O43897 1013 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms