RNA–Protein interactions for RNA: ENST00000471165.1

CLIP4-209, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 377 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-209ENST00000471165 VARSP26640 1264 aaKnown RBP9.97□□□□□ -0.81
CLIP4-209ENST00000471165 SYMPKQ92797 1274 aaKnown RBP9.97□□□□□ -0.81
CLIP4-209ENST00000471165 DNMT3LQ9UJW3 386 aa9.97□□□□□ -0.81
CLIP4-209ENST00000471165 USP46P62068 366 aa9.96□□□□□ -0.82
CLIP4-209ENST00000471165 KRTAP1-3Q8IUG1 177 aa9.96□□□□□ -0.82
CLIP4-209ENST00000471165 BAP1Q92560 729 aa9.96□□□□□ -0.82
CLIP4-209ENST00000471165 CFAP44Q96MT7 982 aa9.96□□□□□ -0.82
CLIP4-209ENST00000471165 ZFAND3Q9H8U3 227 aa9.96□□□□□ -0.82
CLIP4-209ENST00000471165 ZIC2O95409 532 aaPredicted RBP9.95□□□□□ -0.82
CLIP4-209ENST00000471165 BMP2P12643 396 aa9.95□□□□□ -0.82
CLIP4-209ENST00000471165 SPOCK3Q9BQ16 436 aa9.95□□□□□ -0.82
CLIP4-209ENST00000471165 SOS2Q07890 1332 aaPredicted RBP9.94□□□□□ -0.82
CLIP4-209ENST00000471165 GPR37O15354 613 aa9.94□□□□□ -0.82
CLIP4-209ENST00000471165 HOXA2O43364 376 aa9.94□□□□□ -0.82
CLIP4-209ENST00000471165 CCNYL3P0C7X3 344 aa9.94□□□□□ -0.82
CLIP4-209ENST00000471165 GUCA2AQ02747 115 aa9.94□□□□□ -0.82
CLIP4-209ENST00000471165 PLA2G4EQ3MJ16 856 aa9.94□□□□□ -0.82
CLIP4-209ENST00000471165 PAXIP1Q6ZW49 1069 aaPredicted RBP9.94□□□□□ -0.82
CLIP4-209ENST00000471165 UNC93B1Q9H1C4 597 aa9.94□□□□□ -0.82
CLIP4-209ENST00000471165 SEMA3EO15041 775 aa9.93□□□□□ -0.82
CLIP4-209ENST00000471165 NANOS1Q8WY41 292 aaKnown RBP9.93□□□□□ -0.82
CLIP4-209ENST00000471165 ITPKCQ96DU7 683 aa9.93□□□□□ -0.82
CLIP4-209ENST00000471165 RBM26Q5T8P6 1007 aaKnown RBP9.92□□□□□ -0.82
CLIP4-209ENST00000471165 RETREG3Q86VR2 466 aa9.92□□□□□ -0.82
CLIP4-209ENST00000471165 Q8N3U1 123 aa9.92□□□□□ -0.82
CLIP4-209ENST00000471165 ZNF511Q8NB15 262 aa9.92□□□□□ -0.82
CLIP4-209ENST00000471165 LINC00528Q8N1L1 170 aa9.91□□□□□ -0.82
CLIP4-209ENST00000471165 UPP2O95045 317 aa9.9□□□□□ -0.82
CLIP4-209ENST00000471165 ITGB2P05107 769 aa9.9□□□□□ -0.82
CLIP4-209ENST00000471165 MS4A1P11836 297 aa9.89□□□□□ -0.83
CLIP4-209ENST00000471165 PTSQ03393 145 aa9.89□□□□□ -0.83
CLIP4-209ENST00000471165 PROCP04070 461 aa9.87□□□□□ -0.83
CLIP4-209ENST00000471165 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.87□□□□□ -0.83
CLIP4-209ENST00000471165 MEIOBQ8N635 442 aa9.87□□□□□ -0.83
CLIP4-209ENST00000471165 DCAF5Q96JK2 942 aa9.87□□□□□ -0.83
CLIP4-209ENST00000471165 EVA1BQ9NVM1 165 aa9.87□□□□□ -0.83
CLIP4-209ENST00000471165 K7ELQ4 463 aaPredicted RBP9.86□□□□□ -0.83
CLIP4-209ENST00000471165 NR3C2P08235 984 aa9.86□□□□□ -0.83
CLIP4-209ENST00000471165 FAM174AQ8TBP5 190 aa9.86□□□□□ -0.83
CLIP4-209ENST00000471165 CDK15Q96Q40 435 aa9.86□□□□□ -0.83
CLIP4-209ENST00000471165 KCNH2Q12809 1159 aa9.85□□□□□ -0.83
CLIP4-209ENST00000471165 PTPRNQ16849 979 aa9.85□□□□□ -0.83
CLIP4-209ENST00000471165 ARID5BQ14865 1188 aa9.84□□□□□ -0.83
CLIP4-209ENST00000471165 LYPD4Q6UWN0 246 aa9.84□□□□□ -0.83
CLIP4-209ENST00000471165 CCDC155Q8N6L0 562 aa9.84□□□□□ -0.83
CLIP4-209ENST00000471165 GALNT6Q8NCL4 622 aa9.83□□□□□ -0.84
CLIP4-209ENST00000471165 NR5A1Q13285 461 aa9.82□□□□□ -0.84
CLIP4-209ENST00000471165 VWA5B2Q8N398 1253 aa9.82□□□□□ -0.84
CLIP4-209ENST00000471165 TTLL8A6PVC2 850 aa9.81□□□□□ -0.84
CLIP4-209ENST00000471165 SPTLC1O15269 473 aa9.8□□□□□ -0.84
CLIP4-209ENST00000471165 ADAMTS2O95450 1211 aa9.8□□□□□ -0.84
CLIP4-209ENST00000471165 MAP3K10Q02779 954 aa9.8□□□□□ -0.84
CLIP4-209ENST00000471165 CDC14CA4D256 554 aa9.78□□□□□ -0.84
CLIP4-209ENST00000471165 FIGNL2A6NMB9 653 aa9.78□□□□□ -0.84
CLIP4-209ENST00000471165 PHF20L1A8MW92 1017 aa9.78□□□□□ -0.84
CLIP4-209ENST00000471165 C6orf229H3BNL8 230 aa9.78□□□□□ -0.84
CLIP4-209ENST00000471165 GRM5P41594 1212 aa9.78□□□□□ -0.84
CLIP4-209ENST00000471165 SV2AQ7L0J3 742 aa9.78□□□□□ -0.84
CLIP4-209ENST00000471165 TSEN34Q9BSV6 310 aaKnown RBP9.78□□□□□ -0.84
CLIP4-209ENST00000471165 CNTNAP5Q8WYK1 1306 aa9.78□□□□□ -0.84
CLIP4-209ENST00000471165 SLC35F4A4IF30 521 aa9.77□□□□□ -0.85
CLIP4-209ENST00000471165 CELA2BP08218 269 aaPredicted RBP9.77□□□□□ -0.85
CLIP4-209ENST00000471165 ITGA6P23229 1130 aa9.77□□□□□ -0.85
CLIP4-209ENST00000471165 PCDHGC3Q9UN70 934 aa9.77□□□□□ -0.85
CLIP4-209ENST00000471165 LCE3BQ5TA77 95 aa9.76□□□□□ -0.85
CLIP4-209ENST00000471165 FOXJ1Q92949 421 aa9.76□□□□□ -0.85
CLIP4-209ENST00000471165 TESPA1A2RU30 521 aaPredicted RBP9.74□□□□□ -0.85
CLIP4-209ENST00000471165 FDX1P10109 184 aa9.74□□□□□ -0.85
CLIP4-209ENST00000471165 ENAMQ9NRM1 1142 aa9.74□□□□□ -0.85
CLIP4-209ENST00000471165 MDM2Q00987 491 aaPredicted RBP9.73□□□□□ -0.85
CLIP4-209ENST00000471165 SRSF11Q05519 484 aaKnown RBP9.73□□□□□ -0.85
CLIP4-209ENST00000471165 BAG6P46379 1132 aa9.72□□□□□ -0.85
CLIP4-209ENST00000471165 SMYD5Q6GMV2 418 aa9.72□□□□□ -0.85
CLIP4-209ENST00000471165 SH3RF1Q7Z6J0 888 aa9.71□□□□□ -0.86
CLIP4-209ENST00000471165 NUTM1Q86Y26 1132 aa9.71□□□□□ -0.86
CLIP4-209ENST00000471165 BEND7Q8N7W2 519 aaPredicted RBP9.71□□□□□ -0.86
CLIP4-209ENST00000471165 P3H3Q8IVL6 736 aa9.7□□□□□ -0.86
CLIP4-209ENST00000471165 KRTAP4-12Q9BQ66 201 aa9.7□□□□□ -0.86
CLIP4-209ENST00000471165 FURINP09958 794 aa9.68□□□□□ -0.86
CLIP4-209ENST00000471165 CTHP32929 405 aa9.68□□□□□ -0.86
CLIP4-209ENST00000471165 C4orf48Q5BLP8 95 aa9.68□□□□□ -0.86
CLIP4-209ENST00000471165 PRR7Q8TB68 274 aa9.68□□□□□ -0.86
CLIP4-209ENST00000471165 PODNQ7Z5L7 613 aa9.67□□□□□ -0.86
CLIP4-209ENST00000471165 DESI1Q6ICB0 168 aa9.66□□□□□ -0.86
CLIP4-209ENST00000471165 SPINT1O43278 529 aa9.65□□□□□ -0.86
CLIP4-209ENST00000471165 FSHRP23945 695 aa9.65□□□□□ -0.86
CLIP4-209ENST00000471165 GAS6Q14393 721 aa9.65□□□□□ -0.86
CLIP4-209ENST00000471165 TSHZ2Q9NRE2 1034 aa9.65□□□□□ -0.86
CLIP4-209ENST00000471165 EMILIN1Q9Y6C2 1016 aa9.65□□□□□ -0.86
CLIP4-209ENST00000471165 AGERQ15109 404 aa9.64□□□□□ -0.87
CLIP4-209ENST00000471165 GPIHBP1Q8IV16 184 aa9.62□□□□□ -0.87
CLIP4-209ENST00000471165 NEDD1Q8NHV4 660 aa9.62□□□□□ -0.87
CLIP4-209ENST00000471165 FAM217BQ9NTX9 383 aaPredicted RBP9.62□□□□□ -0.87
CLIP4-209ENST00000471165 MAP2K5Q13163 448 aa9.61□□□□□ -0.87
CLIP4-209ENST00000471165 BPHLQ86WA6 291 aaPredicted RBP9.61□□□□□ -0.87
CLIP4-209ENST00000471165 KRTAP9-9Q9BYP9 154 aa9.61□□□□□ -0.87
CLIP4-209ENST00000471165 KRTAP9-4Q9BYQ2 154 aa9.61□□□□□ -0.87
CLIP4-209ENST00000471165 SENP3-EIF4A1A0A087X0R7 540 aa9.6□□□□□ -0.87
CLIP4-209ENST00000471165 CBLBQ13191 982 aa9.6□□□□□ -0.87
CLIP4-209ENST00000471165 LYPD8Q6UX82 237 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms