RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 GPRASP1Q5JY77 1395 aa13.31□□□□□ -0.28
SYNGAP1-205ENST00000470232 KNDC1Q76NI1 1749 aa13.3□□□□□ -0.28
SYNGAP1-205ENST00000470232 ADGRB2O60241 1585 aa13.3□□□□□ -0.28
SYNGAP1-205ENST00000470232 DHX57Q6P158 1386 aaKnown RBP13.3□□□□□ -0.28
SYNGAP1-205ENST00000470232 COL14A1Q05707 1796 aaKnown RBP13.3□□□□□ -0.28
SYNGAP1-205ENST00000470232 PDE3BQ13370 1112 aa13.29□□□□□ -0.28
SYNGAP1-205ENST00000470232 RGPD8O14715 1765 aaPredicted RBP13.29□□□□□ -0.28
SYNGAP1-205ENST00000470232 KCNQ2O43526 872 aa13.28□□□□□ -0.28
SYNGAP1-205ENST00000470232 PRDM11Q9NQV5 511 aa13.28□□□□□ -0.28
SYNGAP1-205ENST00000470232 RNF216Q9NWF9 866 aaPredicted RBP13.28□□□□□ -0.28
SYNGAP1-205ENST00000470232 POGKQ9P215 609 aa13.28□□□□□ -0.28
SYNGAP1-205ENST00000470232 NRAPQ86VF7 1730 aa13.27□□□□□ -0.28
SYNGAP1-205ENST00000470232 ABCA3Q99758 1704 aa13.27□□□□□ -0.28
SYNGAP1-205ENST00000470232 C14orf93Q9H972 538 aaKnown RBP13.27□□□□□ -0.29
SYNGAP1-205ENST00000470232 IFT172Q9UG01 1749 aa13.27□□□□□ -0.29
SYNGAP1-205ENST00000470232 PAK3O75914 559 aaPredicted RBP13.26□□□□□ -0.29
SYNGAP1-205ENST00000470232 SAFB2Q14151 953 aaKnown RBP eCLIP13.26□□□□□ -0.29
SYNGAP1-205ENST00000470232 SPATA31A1Q5TZJ5 1347 aa13.26□□□□□ -0.29
SYNGAP1-205ENST00000470232 ANKARQ7Z5J8 1434 aa13.26□□□□□ -0.29
SYNGAP1-205ENST00000470232 PRAM1Q96QH2 718 aa13.26□□□□□ -0.29
SYNGAP1-205ENST00000470232 TNS1Q9HBL0 1735 aaKnown RBP13.26□□□□□ -0.29
SYNGAP1-205ENST00000470232 NINLQ9Y2I6 1382 aa13.26□□□□□ -0.29
SYNGAP1-205ENST00000470232 C11orf95C9JLR9 678 aaPredicted RBP13.25□□□□□ -0.29
SYNGAP1-205ENST00000470232 EVA1CP58658 441 aa13.25□□□□□ -0.29
SYNGAP1-205ENST00000470232 PIK3C2GO75747 1445 aa13.24□□□□□ -0.29
SYNGAP1-205ENST00000470232 EIF3AQ14152 1382 aaKnown RBP13.24□□□□□ -0.29
SYNGAP1-205ENST00000470232 NGDNQ8NEJ9 315 aaKnown RBP13.24□□□□□ -0.29
SYNGAP1-205ENST00000470232 STRN4Q9NRL3 753 aa13.24□□□□□ -0.29
SYNGAP1-205ENST00000470232 THSD7AQ9UPZ6 1657 aa13.24□□□□□ -0.29
SYNGAP1-205ENST00000470232 ACIN1Q9UKV3 1341 aaKnown RBP13.23□□□□□ -0.29
SYNGAP1-205ENST00000470232 PPARGC1BQ86YN6 1023 aaKnown RBP13.23□□□□□ -0.29
SYNGAP1-205ENST00000470232 SPATA31E1Q6ZUB1 1445 aa13.22□□□□□ -0.29
SYNGAP1-205ENST00000470232 BARGINQ6ZT62 677 aa13.22□□□□□ -0.29
SYNGAP1-205ENST00000470232 CFAP70Q5T0N1 1121 aa13.21□□□□□ -0.29
SYNGAP1-205ENST00000470232 USP35Q9P2H5 1018 aa13.21□□□□□ -0.29
SYNGAP1-205ENST00000470232 TRPM3Q9HCF6 1732 aaPredicted RBP13.19□□□□□ -0.3
SYNGAP1-205ENST00000470232 ALS2Q96Q42 1657 aa13.19□□□□□ -0.3
SYNGAP1-205ENST00000470232 CHRNA2Q15822 529 aa13.19□□□□□ -0.3
SYNGAP1-205ENST00000470232 THRAP3Q9Y2W1 955 aaKnown RBP13.19□□□□□ -0.3
SYNGAP1-205ENST00000470232 KIAA0232Q92628 1395 aa13.19□□□□□ -0.3
SYNGAP1-205ENST00000470232 RREB1Q92766 1687 aa13.18□□□□□ -0.3
SYNGAP1-205ENST00000470232 TCP11L2Q8N4U5 519 aa13.18□□□□□ -0.3
SYNGAP1-205ENST00000470232 HIRIP3Q9BW71 556 aaPredicted RBP13.18□□□□□ -0.3
SYNGAP1-205ENST00000470232 SENP3-EIF4A1A0A087X0R7 540 aa13.17□□□□□ -0.3
SYNGAP1-205ENST00000470232 WASLO00401 505 aaPredicted RBP13.17□□□□□ -0.3
SYNGAP1-205ENST00000470232 ZC3H6P61129 1189 aaKnown RBP13.17□□□□□ -0.3
SYNGAP1-205ENST00000470232 ZNF784Q8NCA9 323 aaPredicted RBP13.17□□□□□ -0.3
SYNGAP1-205ENST00000470232 MPHOSPH9Q99550 1183 aa13.17□□□□□ -0.3
SYNGAP1-205ENST00000470232 NUP188Q5SRE5 1749 aa13.16□□□□□ -0.3
SYNGAP1-205ENST00000470232 PLSCR1O15162 318 aa13.16□□□□□ -0.3
SYNGAP1-205ENST00000470232 DLC1Q96QB1 1528 aa13.16□□□□□ -0.3
SYNGAP1-205ENST00000470232 MINK1Q8N4C8 1332 aaPredicted RBP13.15□□□□□ -0.3
SYNGAP1-205ENST00000470232 TRAK1Q9UPV9 953 aa13.15□□□□□ -0.3
SYNGAP1-205ENST00000470232 IFFO2Q5TF58 517 aa13.14□□□□□ -0.31
SYNGAP1-205ENST00000470232 PRR36Q9H6K5 1346 aa13.13□□□□□ -0.31
SYNGAP1-205ENST00000470232 SSH2Q76I76 1423 aa13.13□□□□□ -0.31
SYNGAP1-205ENST00000470232 TULP4Q9NRJ4 1543 aa13.13□□□□□ -0.31
SYNGAP1-205ENST00000470232 C1QTNF8P60827 252 aa13.13□□□□□ -0.31
SYNGAP1-205ENST00000470232 LARP1Q6PKG0 1096 aaKnown RBP13.13□□□□□ -0.31
SYNGAP1-205ENST00000470232 BCL11BQ9C0K0 894 aaPredicted RBP13.13□□□□□ -0.31
SYNGAP1-205ENST00000470232 UTRNP46939 3433 aa13.12□□□□□ -0.31
SYNGAP1-205ENST00000470232 ATP7BP35670 1465 aa13.11□□□□□ -0.31
SYNGAP1-205ENST00000470232 CRYBG1Q9Y4K1 1723 aa13.11□□□□□ -0.31
SYNGAP1-205ENST00000470232 NUTM2GQ5VZR2 741 aa13.11□□□□□ -0.31
SYNGAP1-205ENST00000470232 NUDT16Q96DE0 195 aaKnown RBP13.11□□□□□ -0.31
SYNGAP1-205ENST00000470232 ABTB2Q8N961 1025 aa13.1□□□□□ -0.31
SYNGAP1-205ENST00000470232 OVOS2A0A0G2JMS6 1433 aa13.09□□□□□ -0.31
SYNGAP1-205ENST00000470232 OVOS2A0A0J9YW53 1432 aa13.09□□□□□ -0.31
SYNGAP1-205ENST00000470232 ZBTB7AO95365 584 aa13.09□□□□□ -0.31
SYNGAP1-205ENST00000470232 DDB1Q16531 1140 aa13.09□□□□□ -0.31
SYNGAP1-205ENST00000470232 OVOS2Q6IE36 1432 aa13.09□□□□□ -0.31
SYNGAP1-205ENST00000470232 SYT17Q9BSW7 474 aa13.09□□□□□ -0.31
SYNGAP1-205ENST00000470232 STK32BQ9NY57 414 aa13.09□□□□□ -0.31
SYNGAP1-205ENST00000470232 ATF5Q9Y2D1 282 aaPredicted RBP13.09□□□□□ -0.31
SYNGAP1-205ENST00000470232 CAMTA1Q9Y6Y1 1673 aa13.08□□□□□ -0.31
SYNGAP1-205ENST00000470232 CPDO75976 1380 aa13.08□□□□□ -0.31
SYNGAP1-205ENST00000470232 NPM3O75607 178 aaKnown RBP13.08□□□□□ -0.32
SYNGAP1-205ENST00000470232 NLRP13Q86W25 1043 aa13.08□□□□□ -0.32
SYNGAP1-205ENST00000470232 PHRF1Q9P1Y6 1649 aaKnown RBP13.07□□□□□ -0.32
SYNGAP1-205ENST00000470232 STAC3Q96MF2 364 aa13.07□□□□□ -0.32
SYNGAP1-205ENST00000470232 FHDC1Q9C0D6 1143 aaPredicted RBP13.07□□□□□ -0.32
SYNGAP1-205ENST00000470232 CHD4Q14839 1912 aa13.07□□□□□ -0.32
SYNGAP1-205ENST00000470232 ITSN1Q15811 1721 aa13.07□□□□□ -0.32
SYNGAP1-205ENST00000470232 RGPD3A6NKT7 1758 aaPredicted RBP13.07□□□□□ -0.32
SYNGAP1-205ENST00000470232 RGPD4Q7Z3J3 1758 aa13.07□□□□□ -0.32
SYNGAP1-205ENST00000470232 GCP02774 474 aa13.06□□□□□ -0.32
SYNGAP1-205ENST00000470232 PTGER2P43116 358 aa13.06□□□□□ -0.32
SYNGAP1-205ENST00000470232 PCGF6Q9BYE7 350 aa13.06□□□□□ -0.32
SYNGAP1-205ENST00000470232 ANO8Q9HCE9 1232 aaPredicted RBP13.06□□□□□ -0.32
SYNGAP1-205ENST00000470232 CCDC61Q9Y6R9 512 aa13.06□□□□□ -0.32
SYNGAP1-205ENST00000470232 ACEP12821 1306 aa13.06□□□□□ -0.32
SYNGAP1-205ENST00000470232 NRKQ7Z2Y5 1582 aa13.06□□□□□ -0.32
SYNGAP1-205ENST00000470232 PARP4Q9UKK3 1724 aaKnown RBP13.05□□□□□ -0.32
SYNGAP1-205ENST00000470232 CDCA7Q9BWT1 371 aaPredicted RBP13.05□□□□□ -0.32
SYNGAP1-205ENST00000470232 CDK19Q9BWU1 502 aa13.05□□□□□ -0.32
SYNGAP1-205ENST00000470232 MTFR1LQ9H019 292 aa13.05□□□□□ -0.32
SYNGAP1-205ENST00000470232 KDM2AQ9Y2K7 1162 aa13.05□□□□□ -0.32
SYNGAP1-205ENST00000470232 CRB1P82279 1406 aa13.05□□□□□ -0.32
SYNGAP1-205ENST00000470232 PLEKHG3A1L390 1219 aa13.04□□□□□ -0.32
SYNGAP1-205ENST00000470232 GIGYF1O75420 1035 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms