RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 RGL3Q3MIN7 710 aa18.12■□□□□ 0.49
LSM2-209ENST00000470083 PMFBP1Q8TBY8 1022 aa18.12■□□□□ 0.49
LSM2-209ENST00000470083 SPATA31A1Q5TZJ5 1347 aa18.12■□□□□ 0.49
LSM2-209ENST00000470083 IFT172Q9UG01 1749 aa18.12■□□□□ 0.49
LSM2-209ENST00000470083 PRDM11Q9NQV5 511 aa18.11■□□□□ 0.49
LSM2-209ENST00000470083 KCNQ2O43526 872 aa18.1■□□□□ 0.49
LSM2-209ENST00000470083 GPRASP1Q5JY77 1395 aa18.09■□□□□ 0.49
LSM2-209ENST00000470083 RGPD8O14715 1765 aaPredicted RBP18.09■□□□□ 0.49
LSM2-209ENST00000470083 UTRNP46939 3433 aa18.08■□□□□ 0.48
LSM2-209ENST00000470083 PRAM1Q96QH2 718 aa18.08■□□□□ 0.48
LSM2-209ENST00000470083 TRPM3Q9HCF6 1732 aaPredicted RBP18.07■□□□□ 0.48
LSM2-209ENST00000470083 ACIN1Q9UKV3 1341 aaKnown RBP18.07■□□□□ 0.48
LSM2-209ENST00000470083 RREB1Q92766 1687 aa18.07■□□□□ 0.48
LSM2-209ENST00000470083 SAFB2Q14151 953 aaKnown RBP eCLIP18.07■□□□□ 0.48
LSM2-209ENST00000470083 C14orf93Q9H972 538 aaKnown RBP18.07■□□□□ 0.48
LSM2-209ENST00000470083 DHX57Q6P158 1386 aaKnown RBP18.06■□□□□ 0.48
LSM2-209ENST00000470083 ALS2Q96Q42 1657 aa18.06■□□□□ 0.48
LSM2-209ENST00000470083 ZNF784Q8NCA9 323 aaPredicted RBP18.05■□□□□ 0.48
LSM2-209ENST00000470083 NUP188Q5SRE5 1749 aa18.05■□□□□ 0.48
LSM2-209ENST00000470083 PDE3BQ13370 1112 aa18.04■□□□□ 0.48
LSM2-209ENST00000470083 BARGINQ6ZT62 677 aa18.04■□□□□ 0.48
LSM2-209ENST00000470083 KIAA0232Q92628 1395 aa18.04■□□□□ 0.48
LSM2-209ENST00000470083 STRN4Q9NRL3 753 aa18.03■□□□□ 0.48
LSM2-209ENST00000470083 EIF3AQ14152 1382 aaKnown RBP18.02■□□□□ 0.47
LSM2-209ENST00000470083 CHRNA2Q15822 529 aa18.01■□□□□ 0.47
LSM2-209ENST00000470083 CFAP70Q5T0N1 1121 aa18.01■□□□□ 0.47
LSM2-209ENST00000470083 POGKQ9P215 609 aa18.01■□□□□ 0.47
LSM2-209ENST00000470083 PRR36Q9H6K5 1346 aa18■□□□□ 0.47
LSM2-209ENST00000470083 DLC1Q96QB1 1528 aa18■□□□□ 0.47
LSM2-209ENST00000470083 SENP3-EIF4A1A0A087X0R7 540 aa18■□□□□ 0.47
LSM2-209ENST00000470083 PAK3O75914 559 aaPredicted RBP18■□□□□ 0.47
LSM2-209ENST00000470083 IFFO2Q5TF58 517 aa18■□□□□ 0.47
LSM2-209ENST00000470083 USP35Q9P2H5 1018 aa18■□□□□ 0.47
LSM2-209ENST00000470083 CRYBG1Q9Y4K1 1723 aa18■□□□□ 0.47
LSM2-209ENST00000470083 PPARGC1BQ86YN6 1023 aaKnown RBP17.99■□□□□ 0.47
LSM2-209ENST00000470083 SSH2Q76I76 1423 aa17.98■□□□□ 0.47
LSM2-209ENST00000470083 NGDNQ8NEJ9 315 aaKnown RBP17.98■□□□□ 0.47
LSM2-209ENST00000470083 TCP11L2Q8N4U5 519 aa17.97■□□□□ 0.47
LSM2-209ENST00000470083 HIRIP3Q9BW71 556 aaPredicted RBP17.97■□□□□ 0.47
LSM2-209ENST00000470083 TULP4Q9NRJ4 1543 aa17.97■□□□□ 0.47
LSM2-209ENST00000470083 CAMTA1Q9Y6Y1 1673 aa17.96■□□□□ 0.47
LSM2-209ENST00000470083 C11orf95C9JLR9 678 aaPredicted RBP17.96■□□□□ 0.47
LSM2-209ENST00000470083 EVA1CP58658 441 aa17.95■□□□□ 0.46
LSM2-209ENST00000470083 C1QTNF8P60827 252 aa17.95■□□□□ 0.46
LSM2-209ENST00000470083 ZC3H6P61129 1189 aaKnown RBP17.95■□□□□ 0.46
LSM2-209ENST00000470083 LARP1Q6PKG0 1096 aaKnown RBP17.94■□□□□ 0.46
LSM2-209ENST00000470083 ANO8Q9HCE9 1232 aaPredicted RBP17.94■□□□□ 0.46
LSM2-209ENST00000470083 NRKQ7Z2Y5 1582 aa17.93■□□□□ 0.46
LSM2-209ENST00000470083 WASLO00401 505 aaPredicted RBP17.93■□□□□ 0.46
LSM2-209ENST00000470083 PLSCR1O15162 318 aa17.93■□□□□ 0.46
LSM2-209ENST00000470083 THRAP3Q9Y2W1 955 aaKnown RBP17.93■□□□□ 0.46
LSM2-209ENST00000470083 ATP7BP35670 1465 aa17.93■□□□□ 0.46
LSM2-209ENST00000470083 MINK1Q8N4C8 1332 aaPredicted RBP17.93■□□□□ 0.46
LSM2-209ENST00000470083 PTGER2P43116 358 aa17.91■□□□□ 0.46
LSM2-209ENST00000470083 MPHOSPH9Q99550 1183 aa17.91■□□□□ 0.46
LSM2-209ENST00000470083 OVOS2A0A0G2JMS6 1433 aa17.9■□□□□ 0.46
LSM2-209ENST00000470083 OVOS2A0A0J9YW53 1432 aa17.9■□□□□ 0.46
LSM2-209ENST00000470083 OVOS2Q6IE36 1432 aa17.9■□□□□ 0.46
LSM2-209ENST00000470083 ZBTB7AO95365 584 aa17.9■□□□□ 0.46
LSM2-209ENST00000470083 PDGFDQ9GZP0 370 aaPredicted RBP17.9■□□□□ 0.46
LSM2-209ENST00000470083 TRAK1Q9UPV9 953 aa17.9■□□□□ 0.46
LSM2-209ENST00000470083 ADGRB1O14514 1584 aa17.9■□□□□ 0.46
LSM2-209ENST00000470083 CASZ1Q86V15 1759 aa17.89■□□□□ 0.45
LSM2-209ENST00000470083 CEP350Q5VT06 3117 aa17.89■□□□□ 0.45
LSM2-209ENST00000470083 PHRF1Q9P1Y6 1649 aaKnown RBP17.89■□□□□ 0.45
LSM2-209ENST00000470083 CPDO75976 1380 aa17.89■□□□□ 0.45
LSM2-209ENST00000470083 NUTM2GQ5VZR2 741 aa17.88■□□□□ 0.45
LSM2-209ENST00000470083 RGPD3A6NKT7 1758 aaPredicted RBP17.87■□□□□ 0.45
LSM2-209ENST00000470083 RGPD4Q7Z3J3 1758 aa17.87■□□□□ 0.45
LSM2-209ENST00000470083 SYT17Q9BSW7 474 aa17.87■□□□□ 0.45
LSM2-209ENST00000470083 FHDC1Q9C0D6 1143 aaPredicted RBP17.87■□□□□ 0.45
LSM2-209ENST00000470083 BCL11BQ9C0K0 894 aaPredicted RBP17.86■□□□□ 0.45
LSM2-209ENST00000470083 MYOM1P52179 1685 aa17.86■□□□□ 0.45
LSM2-209ENST00000470083 ATF5Q9Y2D1 282 aaPredicted RBP17.85■□□□□ 0.45
LSM2-209ENST00000470083 PARP4Q9UKK3 1724 aaKnown RBP17.84■□□□□ 0.45
LSM2-209ENST00000470083 LMO7Q8WWI1 1683 aa17.84■□□□□ 0.45
LSM2-209ENST00000470083 PROM2Q8N271 834 aa17.84■□□□□ 0.45
LSM2-209ENST00000470083 NUDT16Q96DE0 195 aaKnown RBP17.84■□□□□ 0.45
LSM2-209ENST00000470083 PEAK1Q9H792 1746 aa17.84■□□□□ 0.45
LSM2-209ENST00000470083 COL5A2P05997 1499 aaPredicted RBP17.83■□□□□ 0.45
LSM2-209ENST00000470083 POLR3AO14802 1390 aaPredicted RBP17.83■□□□□ 0.45
LSM2-209ENST00000470083 USP19O94966 1318 aa17.83■□□□□ 0.44
LSM2-209ENST00000470083 PTF1AQ7RTS3 328 aa17.82■□□□□ 0.44
LSM2-209ENST00000470083 CRB1P82279 1406 aa17.81■□□□□ 0.44
LSM2-209ENST00000470083 SGIP1Q9BQI5 828 aa17.81■□□□□ 0.44
LSM2-209ENST00000470083 MTFR1LQ9H019 292 aa17.81■□□□□ 0.44
LSM2-209ENST00000470083 DDB1Q16531 1140 aa17.8■□□□□ 0.44
LSM2-209ENST00000470083 ABTB2Q8N961 1025 aa17.8■□□□□ 0.44
LSM2-209ENST00000470083 STK32BQ9NY57 414 aa17.8■□□□□ 0.44
LSM2-209ENST00000470083 BCL9O00512 1426 aa17.8■□□□□ 0.44
LSM2-209ENST00000470083 ACEP12821 1306 aa17.79■□□□□ 0.44
LSM2-209ENST00000470083 SLC15A2Q16348 729 aa17.79■□□□□ 0.44
LSM2-209ENST00000470083 MAP3K5Q99683 1374 aa17.79■□□□□ 0.44
LSM2-209ENST00000470083 ITSN1Q15811 1721 aa17.78■□□□□ 0.44
LSM2-209ENST00000470083 GIGYF1O75420 1035 aaPredicted RBP17.78■□□□□ 0.44
LSM2-209ENST00000470083 GCP02774 474 aa17.78■□□□□ 0.44
LSM2-209ENST00000470083 TXNRD1Q16881 649 aa17.77■□□□□ 0.44
LSM2-209ENST00000470083 CCDC61Q9Y6R9 512 aa17.77■□□□□ 0.44
LSM2-209ENST00000470083 GOLGB1Q14789 3259 aaKnown RBP17.76■□□□□ 0.43
LSM2-209ENST00000470083 LRRC37A3O60309 1634 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 310.7 ms