RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 SEMA3FQ13275 785 aa6.18□□□□□ -1.42
HMGB1P25-201ENST00000468402 GRIPAP1Q4V328 841 aa6.18□□□□□ -1.42
HMGB1P25-201ENST00000468402 PNMA1Q8ND90 353 aa6.18□□□□□ -1.42
HMGB1P25-201ENST00000468402 ADAMTS19Q8TE59 1207 aa6.18□□□□□ -1.42
HMGB1P25-201ENST00000468402 HLA-CQ95604 372 aa6.18□□□□□ -1.42
HMGB1P25-201ENST00000468402 TFIP11Q9UBB9 837 aaKnown RBP6.18□□□□□ -1.42
HMGB1P25-201ENST00000468402 PCDHGC3Q9UN70 934 aa6.18□□□□□ -1.42
HMGB1P25-201ENST00000468402 USTQ9Y2C2 406 aa6.18□□□□□ -1.42
HMGB1P25-201ENST00000468402 V9GY48 417 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P25-201ENST00000468402 CARNS1A5YM72 827 aa6.17□□□□□ -1.42
HMGB1P25-201ENST00000468402 CFAP70Q5T0N1 1121 aa6.17□□□□□ -1.42
HMGB1P25-201ENST00000468402 ZNF775Q96BV0 537 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P25-201ENST00000468402 SWT1Q5T5J6 900 aaKnown RBP6.16□□□□□ -1.42
HMGB1P25-201ENST00000468402 TRIM34Q9BYJ4 488 aa6.16□□□□□ -1.42
HMGB1P25-201ENST00000468402 EPS8L1Q8TE68 723 aa6.15□□□□□ -1.42
HMGB1P25-201ENST00000468402 ALG2Q9H553 416 aa6.15□□□□□ -1.42
HMGB1P25-201ENST00000468402 VRTNQ9H8Y1 702 aa6.15□□□□□ -1.42
HMGB1P25-201ENST00000468402 CFAP99D6REC4 459 aa6.14□□□□□ -1.43
HMGB1P25-201ENST00000468402 SLC10A3P09131 477 aa6.14□□□□□ -1.43
HMGB1P25-201ENST00000468402 SOX11P35716 441 aa6.14□□□□□ -1.43
HMGB1P25-201ENST00000468402 TJAP1Q5JTD0 557 aa6.14□□□□□ -1.43
HMGB1P25-201ENST00000468402 ZNF516Q92618 1163 aa6.14□□□□□ -1.43
HMGB1P25-201ENST00000468402 ZNF428Q96B54 188 aa6.14□□□□□ -1.43
HMGB1P25-201ENST00000468402 IVNS1ABPQ9Y6Y0 642 aa6.14□□□□□ -1.43
HMGB1P25-201ENST00000468402 EIF4G2P78344 907 aaKnown RBP eCLIP6.13□□□□□ -1.43
HMGB1P25-201ENST00000468402 FUT2Q10981 343 aa6.13□□□□□ -1.43
HMGB1P25-201ENST00000468402 NR6A1Q15406 480 aa6.13□□□□□ -1.43
HMGB1P25-201ENST00000468402 CCDC27Q2M243 656 aa6.13□□□□□ -1.43
HMGB1P25-201ENST00000468402 SLF2Q8IX21 1173 aa6.13□□□□□ -1.43
HMGB1P25-201ENST00000468402 PRR7Q8TB68 274 aa6.13□□□□□ -1.43
HMGB1P25-201ENST00000468402 SYMPKQ92797 1274 aaKnown RBP6.13□□□□□ -1.43
HMGB1P25-201ENST00000468402 FAM187AA6NFU0 413 aa6.12□□□□□ -1.43
HMGB1P25-201ENST00000468402 E9PSI1 815 aa6.12□□□□□ -1.43
HMGB1P25-201ENST00000468402 LCE2BO14633 110 aa6.11□□□□□ -1.43
HMGB1P25-201ENST00000468402 CFHP08603 1231 aa6.11□□□□□ -1.43
HMGB1P25-201ENST00000468402 ATP6V1AP38606 617 aa6.11□□□□□ -1.43
HMGB1P25-201ENST00000468402 SRPK2P78362 688 aaKnown RBP6.11□□□□□ -1.43
HMGB1P25-201ENST00000468402 NKX2-3Q8TAU0 364 aa6.11□□□□□ -1.43
HMGB1P25-201ENST00000468402 ATG7O95352 703 aa6.1□□□□□ -1.43
HMGB1P25-201ENST00000468402 SLC19A1P41440 591 aa6.1□□□□□ -1.43
HMGB1P25-201ENST00000468402 TBC1D9Q6ZT07 1266 aa6.1□□□□□ -1.43
HMGB1P25-201ENST00000468402 UCN2Q96RP3 112 aa6.1□□□□□ -1.43
HMGB1P25-201ENST00000468402 MAFBQ9Y5Q3 323 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P25-201ENST00000468402 GPR37L1O60883 481 aa6.09□□□□□ -1.43
HMGB1P25-201ENST00000468402 APLP1P51693 650 aa6.09□□□□□ -1.43
HMGB1P25-201ENST00000468402 B4GALNT3Q6L9W6 998 aa6.09□□□□□ -1.43
HMGB1P25-201ENST00000468402 PRR14Q9BWN1 585 aa6.09□□□□□ -1.43
HMGB1P25-201ENST00000468402 PCDHB3Q9Y5E6 796 aa6.09□□□□□ -1.43
HMGB1P25-201ENST00000468402 TNFRSF10AO00220 468 aa6.08□□□□□ -1.44
HMGB1P25-201ENST00000468402 PER1O15534 1290 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P25-201ENST00000468402 ATP9BO43861 1147 aa6.08□□□□□ -1.44
HMGB1P25-201ENST00000468402 KMT5BQ4FZB7 885 aa6.08□□□□□ -1.44
HMGB1P25-201ENST00000468402 Q3C1V9 767 aa6.07□□□□□ -1.44
HMGB1P25-201ENST00000468402 SND1Q7KZF4 910 aaKnown RBP eCLIP6.07□□□□□ -1.44
HMGB1P25-201ENST00000468402 TMEM88BA6NKF7 163 aa6.06□□□□□ -1.44
HMGB1P25-201ENST00000468402 SKIP12755 728 aa6.06□□□□□ -1.44
HMGB1P25-201ENST00000468402 NR1H3Q13133 447 aa6.06□□□□□ -1.44
HMGB1P25-201ENST00000468402 PUS10Q3MIT2 529 aaKnown RBP6.06□□□□□ -1.44
HMGB1P25-201ENST00000468402 RETREG3Q86VR2 466 aa6.06□□□□□ -1.44
HMGB1P25-201ENST00000468402 ZPR1O75312 459 aa6.05□□□□□ -1.44
HMGB1P25-201ENST00000468402 DGAT1O75907 488 aa6.05□□□□□ -1.44
HMGB1P25-201ENST00000468402 ZNF697Q5TEC3 545 aa6.05□□□□□ -1.44
HMGB1P25-201ENST00000468402 CCER1Q8TC90 406 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P25-201ENST00000468402 ZBBXA8MT70 800 aa6.04□□□□□ -1.44
HMGB1P25-201ENST00000468402 DEPDC4Q8N2C3 294 aa6.04□□□□□ -1.44
HMGB1P25-201ENST00000468402 SLC27A5Q9Y2P5 690 aa6.04□□□□□ -1.44
HMGB1P25-201ENST00000468402 PIK3CDO00329 1044 aa6.03□□□□□ -1.44
HMGB1P25-201ENST00000468402 FBXO45P0C2W1 286 aa6.03□□□□□ -1.44
HMGB1P25-201ENST00000468402 CTHP32929 405 aa6.03□□□□□ -1.44
HMGB1P25-201ENST00000468402 FOXC1Q12948 553 aa6.03□□□□□ -1.44
HMGB1P25-201ENST00000468402 LARP1Q6PKG0 1096 aaKnown RBP6.03□□□□□ -1.44
HMGB1P25-201ENST00000468402 LYPD8Q6UX82 237 aa6.03□□□□□ -1.44
HMGB1P25-201ENST00000468402 NOVA2Q9UNW9 492 aaKnown RBP6.03□□□□□ -1.44
HMGB1P25-201ENST00000468402 USP17L3A6NCW0 530 aa6.02□□□□□ -1.45
HMGB1P25-201ENST00000468402 USP17L4A6NCW7 530 aa6.02□□□□□ -1.45
HMGB1P25-201ENST00000468402 RNF223E7ERA6 249 aa6.02□□□□□ -1.45
HMGB1P25-201ENST00000468402 PPEF1O14829 653 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P25-201ENST00000468402 MYT1Q01538 1121 aa6.02□□□□□ -1.45
HMGB1P25-201ENST00000468402 MORN1Q5T089 497 aa6.02□□□□□ -1.45
HMGB1P25-201ENST00000468402 KANK4Q5T7N3 995 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P25-201ENST00000468402 TMEM164Q5U3C3 297 aa6.02□□□□□ -1.45
HMGB1P25-201ENST00000468402 DESI1Q6ICB0 168 aa6.02□□□□□ -1.45
HMGB1P25-201ENST00000468402 USP17L2Q6R6M4 530 aa6.02□□□□□ -1.45
HMGB1P25-201ENST00000468402 USP17L1Q7RTZ2 530 aa6.02□□□□□ -1.45
HMGB1P25-201ENST00000468402 STK32AQ8WU08 396 aa6.02□□□□□ -1.45
HMGB1P25-201ENST00000468402 FKBPLQ9UIM3 349 aa6.02□□□□□ -1.45
HMGB1P25-201ENST00000468402 AMOTL2Q9Y2J4 779 aa6.02□□□□□ -1.45
HMGB1P25-201ENST00000468402 USP17L5A8MUK1 530 aa6.01□□□□□ -1.45
HMGB1P25-201ENST00000468402 ST8SIA5O15466 376 aa6.01□□□□□ -1.45
HMGB1P25-201ENST00000468402 TLL1O43897 1013 aa6.01□□□□□ -1.45
HMGB1P25-201ENST00000468402 RASA1P20936 1047 aa6.01□□□□□ -1.45
HMGB1P25-201ENST00000468402 SLFNL1Q499Z3 407 aa6.01□□□□□ -1.45
HMGB1P25-201ENST00000468402 SPRYD7Q5W111 196 aa6.01□□□□□ -1.45
HMGB1P25-201ENST00000468402 ZNF598Q86UK7 904 aaKnown RBP6.01□□□□□ -1.45
HMGB1P25-201ENST00000468402 USB1Q9BQ65 265 aaKnown RBP6.01□□□□□ -1.45
HMGB1P25-201ENST00000468402 MKRN1Q9UHC7 482 aaKnown RBP6.01□□□□□ -1.45
HMGB1P25-201ENST00000468402 S1PR4O95977 384 aa6□□□□□ -1.45
HMGB1P25-201ENST00000468402 ARID4AP29374 1257 aaPredicted RBP6□□□□□ -1.45
HMGB1P25-201ENST00000468402 ELOAQ14241 798 aaKnown RBP6□□□□□ -1.45
HMGB1P25-201ENST00000468402 BLOC1S3Q6QNY0 202 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms