RNA–Protein interactions for RNA: ENST00000468039.1

U2AF1-207, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 5

Gene U2AF1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-207ENST00000468039 CYP4X1Q8N118 509 aa8.71□□□□□ -1.02
U2AF1-207ENST00000468039 Q3C1V9 767 aa8.7□□□□□ -1.02
U2AF1-207ENST00000468039 MORN1Q5T089 497 aa8.7□□□□□ -1.02
U2AF1-207ENST00000468039 NPAS3Q8IXF0 933 aa8.7□□□□□ -1.02
U2AF1-207ENST00000468039 PLEKHG3A1L390 1219 aa8.69□□□□□ -1.02
U2AF1-207ENST00000468039 S1PR4O95977 384 aa8.69□□□□□ -1.02
U2AF1-207ENST00000468039 FDX1P10109 184 aa8.69□□□□□ -1.02
U2AF1-207ENST00000468039 MYSM1Q5VVJ2 828 aa8.69□□□□□ -1.02
U2AF1-207ENST00000468039 TOPBP1Q92547 1522 aa8.69□□□□□ -1.02
U2AF1-207ENST00000468039 MOXD2PA6NHM9 499 aa8.68□□□□□ -1.02
U2AF1-207ENST00000468039 SH3D19Q5HYK7 790 aa8.68□□□□□ -1.02
U2AF1-207ENST00000468039 RIC3Q7Z5B4 369 aa8.68□□□□□ -1.02
U2AF1-207ENST00000468039 TMEM151AQ8N4L1 468 aa8.68□□□□□ -1.02
U2AF1-207ENST00000468039 NXF1Q9UBU9 619 aaKnown RBP8.68□□□□□ -1.02
U2AF1-207ENST00000468039 SLC27A5Q9Y2P5 690 aa8.68□□□□□ -1.02
U2AF1-207ENST00000468039 NDUFV2P19404 249 aa8.67□□□□□ -1.02
U2AF1-207ENST00000468039 GJA5P36382 358 aa8.67□□□□□ -1.02
U2AF1-207ENST00000468039 CLK2P49760 499 aaKnown RBP8.67□□□□□ -1.02
U2AF1-207ENST00000468039 SKIV2LQ15477 1246 aaKnown RBP8.67□□□□□ -1.02
U2AF1-207ENST00000468039 DNMBPQ6XZF7 1577 aa8.67□□□□□ -1.02
U2AF1-207ENST00000468039 SCUBE3Q8IX30 993 aa8.67□□□□□ -1.02
U2AF1-207ENST00000468039 FMNL1O95466 1100 aaPredicted RBP8.66□□□□□ -1.02
U2AF1-207ENST00000468039 RSBN1LQ6PCB5 846 aaPredicted RBP8.66□□□□□ -1.02
U2AF1-207ENST00000468039 PCMTD1Q96MG8 357 aaPredicted RBP8.66□□□□□ -1.02
U2AF1-207ENST00000468039 POLR3EQ9NVU0 708 aa8.66□□□□□ -1.02
U2AF1-207ENST00000468039 SPTLC1O15269 473 aa8.65□□□□□ -1.02
U2AF1-207ENST00000468039 GSK3AP49840 483 aa8.65□□□□□ -1.02
U2AF1-207ENST00000468039 GUCA2AQ02747 115 aa8.65□□□□□ -1.02
U2AF1-207ENST00000468039 GOPCQ9HD26 462 aa8.65□□□□□ -1.02
U2AF1-207ENST00000468039 CUX1P39880 1505 aa8.64□□□□□ -1.03
U2AF1-207ENST00000468039 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.64□□□□□ -1.03
U2AF1-207ENST00000468039 C6orf229H3BNL8 230 aa8.64□□□□□ -1.03
U2AF1-207ENST00000468039 TLL1O43897 1013 aa8.64□□□□□ -1.03
U2AF1-207ENST00000468039 CSPP1Q1MSJ5 1256 aa8.64□□□□□ -1.03
U2AF1-207ENST00000468039 HLA-CQ95604 372 aa8.64□□□□□ -1.03
U2AF1-207ENST00000468039 SALL2Q9Y467 1007 aaPredicted RBP8.64□□□□□ -1.03
U2AF1-207ENST00000468039 SPSB2Q99619 263 aa8.63□□□□□ -1.03
U2AF1-207ENST00000468039 ABCC8Q09428 1581 aa8.63□□□□□ -1.03
U2AF1-207ENST00000468039 POLA1P09884 1462 aaPredicted RBP8.63□□□□□ -1.03
U2AF1-207ENST00000468039 NUTM2BA6NNL0 878 aaPredicted RBP8.62□□□□□ -1.03
U2AF1-207ENST00000468039 NUTM2EB1AL46 878 aaPredicted RBP8.62□□□□□ -1.03
U2AF1-207ENST00000468039 GDF11O95390 407 aa8.62□□□□□ -1.03
U2AF1-207ENST00000468039 MTMR2Q13614 643 aa8.62□□□□□ -1.03
U2AF1-207ENST00000468039 TMEM132AQ24JP5 1023 aa8.62□□□□□ -1.03
U2AF1-207ENST00000468039 TUSC1Q2TAM9 212 aa8.62□□□□□ -1.03
U2AF1-207ENST00000468039 NUTM2DQ5VT03 806 aaPredicted RBP8.62□□□□□ -1.03
U2AF1-207ENST00000468039 NUTM2AQ8IVF1 878 aaPredicted RBP8.62□□□□□ -1.03
U2AF1-207ENST00000468039 KRTAP9-2Q9BYQ4 174 aa8.62□□□□□ -1.03
U2AF1-207ENST00000468039 ZBTB3Q9H5J0 574 aa8.62□□□□□ -1.03
U2AF1-207ENST00000468039 LIMD1Q9UGP4 676 aa8.62□□□□□ -1.03
U2AF1-207ENST00000468039 ZNF608Q9ULD9 1512 aaPredicted RBP8.62□□□□□ -1.03
U2AF1-207ENST00000468039 FGD5Q6ZNL6 1462 aa8.62□□□□□ -1.03
U2AF1-207ENST00000468039 SPDYE5A6NIY4 337 aa8.61□□□□□ -1.03
U2AF1-207ENST00000468039 ADH1BP00325 375 aa8.61□□□□□ -1.03
U2AF1-207ENST00000468039 PLA2G2CQ5R387 149 aa8.61□□□□□ -1.03
U2AF1-207ENST00000468039 PRPF38BQ5VTL8 546 aaKnown RBP8.61□□□□□ -1.03
U2AF1-207ENST00000468039 BRICD5Q6PL45 260 aa8.61□□□□□ -1.03
U2AF1-207ENST00000468039 IFT140Q96RY7 1462 aa8.61□□□□□ -1.03
U2AF1-207ENST00000468039 RAD54L2Q9Y4B4 1467 aa8.61□□□□□ -1.03
U2AF1-207ENST00000468039 RPIAP49247 311 aa8.6□□□□□ -1.03
U2AF1-207ENST00000468039 RNF19BQ6ZMZ0 732 aa8.6□□□□□ -1.03
U2AF1-207ENST00000468039 RETREG3Q86VR2 466 aa8.6□□□□□ -1.03
U2AF1-207ENST00000468039 USB1Q9BQ65 265 aaKnown RBP8.6□□□□□ -1.03
U2AF1-207ENST00000468039 PCDHGC3Q9UN70 934 aa8.6□□□□□ -1.03
U2AF1-207ENST00000468039 PCDHB15Q9Y5E8 787 aa8.6□□□□□ -1.03
U2AF1-207ENST00000468039 THAP11Q96EK4 314 aa8.59□□□□□ -1.03
U2AF1-207ENST00000468039 PSMG3-AS1Q96PY0 264 aa8.59□□□□□ -1.03
U2AF1-207ENST00000468039 WRNQ14191 1432 aaPredicted RBP eCLIP8.59□□□□□ -1.03
U2AF1-207ENST00000468039 SYNJ1O43426 1573 aa8.59□□□□□ -1.03
U2AF1-207ENST00000468039 TARBP1Q13395 1621 aaKnown RBP8.58□□□□□ -1.04
U2AF1-207ENST00000468039 TTC24A2A3L6 582 aaPredicted RBP8.58□□□□□ -1.04
U2AF1-207ENST00000468039 IGHA1P01876 353 aa8.58□□□□□ -1.04
U2AF1-207ENST00000468039 RASSF7Q02833 373 aa8.58□□□□□ -1.04
U2AF1-207ENST00000468039 PROCA1Q8NCQ7 364 aaPredicted RBP8.58□□□□□ -1.04
U2AF1-207ENST00000468039 SLC6A16Q9GZN6 736 aa8.58□□□□□ -1.04
U2AF1-207ENST00000468039 SOGA1O94964 1423 aa8.57□□□□□ -1.04
U2AF1-207ENST00000468039 KRTAP9-6A0A140TA67 174 aa8.57□□□□□ -1.04
U2AF1-207ENST00000468039 H3BM21 787 aa8.57□□□□□ -1.04
U2AF1-207ENST00000468039 RNF225M0QZC1 329 aaPredicted RBP8.57□□□□□ -1.04
U2AF1-207ENST00000468039 CD2BP2O95400 341 aaKnown RBP8.57□□□□□ -1.04
U2AF1-207ENST00000468039 HRCP23327 699 aa8.57□□□□□ -1.04
U2AF1-207ENST00000468039 CABLES1Q8TDN4 633 aa8.57□□□□□ -1.04
U2AF1-207ENST00000468039 SYMPKQ92797 1274 aaKnown RBP8.57□□□□□ -1.04
U2AF1-207ENST00000468039 EIF4G3O43432 1585 aaKnown RBP8.56□□□□□ -1.04
U2AF1-207ENST00000468039 LILRB3O75022 631 aa8.56□□□□□ -1.04
U2AF1-207ENST00000468039 MSS51Q4VC12 460 aa8.56□□□□□ -1.04
U2AF1-207ENST00000468039 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.56□□□□□ -1.04
U2AF1-207ENST00000468039 TDRD9Q8NDG6 1382 aaKnown RBP8.56□□□□□ -1.04
U2AF1-207ENST00000468039 AQRO60306 1485 aaKnown RBP eCLIP8.56□□□□□ -1.04
U2AF1-207ENST00000468039 QPCTQ16769 361 aa8.55□□□□□ -1.04
U2AF1-207ENST00000468039 PRR7Q8TB68 274 aa8.55□□□□□ -1.04
U2AF1-207ENST00000468039 TSC1Q92574 1164 aa8.55□□□□□ -1.04
U2AF1-207ENST00000468039 TOP2BQ02880 1626 aa8.54□□□□□ -1.04
U2AF1-207ENST00000468039 BIVM-ERCC5R4GMW8 1640 aa8.54□□□□□ -1.04
U2AF1-207ENST00000468039 KRTAP1-3Q8IUG1 177 aa8.54□□□□□ -1.04
U2AF1-207ENST00000468039 HELBQ8NG08 1087 aaPredicted RBP8.54□□□□□ -1.04
U2AF1-207ENST00000468039 FAM160A2Q8N612 972 aaPredicted RBP8.53□□□□□ -1.04
U2AF1-207ENST00000468039 WDR97A6NE52 1622 aa8.52□□□□□ -1.05
U2AF1-207ENST00000468039 JUNDP17535 347 aa8.52□□□□□ -1.05
U2AF1-207ENST00000468039 RTL5Q5HYW3 569 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms