RNA–Protein interactions for RNA: ENST00000466681.1

MALSU1-202, Transcript of mitochondrial assembly of ribosomal large subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MALSU1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALSU1-202ENST00000466681 ZMYM3Q14202 1370 aa18.55■□□□□ 0.56
MALSU1-202ENST00000466681 HDAC1Q13547 482 aaPredicted RBP18.55■□□□□ 0.56
MALSU1-202ENST00000466681 NOL8Q76FK4 1167 aaKnown RBP18.55■□□□□ 0.56
MALSU1-202ENST00000466681 BCL11BQ9C0K0 894 aaPredicted RBP18.55■□□□□ 0.56
MALSU1-202ENST00000466681 LMBRD1Q9NUN5 540 aa18.55■□□□□ 0.56
MALSU1-202ENST00000466681 ELL2O00472 640 aaPredicted RBP18.54■□□□□ 0.56
MALSU1-202ENST00000466681 GPT2Q8TD30 523 aa18.54■□□□□ 0.56
MALSU1-202ENST00000466681 NUCB1Q02818 461 aa18.53■□□□□ 0.56
MALSU1-202ENST00000466681 BBXQ8WY36 941 aaPredicted RBP18.53■□□□□ 0.56
MALSU1-202ENST00000466681 CSPP1Q1MSJ5 1256 aa18.53■□□□□ 0.56
MALSU1-202ENST00000466681 WDR63Q8IWG1 891 aa18.53■□□□□ 0.56
MALSU1-202ENST00000466681 TMEM63CQ9P1W3 806 aa18.53■□□□□ 0.56
MALSU1-202ENST00000466681 ZNF445P59923 1031 aa18.52■□□□□ 0.56
MALSU1-202ENST00000466681 CCDC94Q9BW85 323 aaPredicted RBP18.52■□□□□ 0.56
MALSU1-202ENST00000466681 KIF16BQ96L93 1317 aa18.52■□□□□ 0.56
MALSU1-202ENST00000466681 ABCC2Q92887 1545 aa18.52■□□□□ 0.56
MALSU1-202ENST00000466681 ZSCAN20P17040 1043 aaPredicted RBP18.52■□□□□ 0.55
MALSU1-202ENST00000466681 MAPK8IP2Q13387 824 aaPredicted RBP18.52■□□□□ 0.55
MALSU1-202ENST00000466681 NGEFQ8N5V2 710 aa18.52■□□□□ 0.55
MALSU1-202ENST00000466681 PPP4R3BQ5MIZ7 849 aa18.51■□□□□ 0.55
MALSU1-202ENST00000466681 ZBTB40Q9NUA8 1239 aa18.5■□□□□ 0.55
MALSU1-202ENST00000466681 CCDC39Q9UFE4 941 aa18.5■□□□□ 0.55
MALSU1-202ENST00000466681 MTERF4Q7Z6M4 381 aaKnown RBP18.49■□□□□ 0.55
MALSU1-202ENST00000466681 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.49■□□□□ 0.55
MALSU1-202ENST00000466681 ADCY10Q96PN6 1610 aa18.49■□□□□ 0.55
MALSU1-202ENST00000466681 PDLIM2Q96JY6 352 aa18.49■□□□□ 0.55
MALSU1-202ENST00000466681 CROCC2H7BZ55 1655 aa18.49■□□□□ 0.55
MALSU1-202ENST00000466681 DMTNQ08495 405 aa18.49■□□□□ 0.55
MALSU1-202ENST00000466681 KIAA2012Q0VF49 1180 aa18.48■□□□□ 0.55
MALSU1-202ENST00000466681 BMP2KLQ5H9B9 411 aa18.48■□□□□ 0.55
MALSU1-202ENST00000466681 CFAP53Q96M91 514 aa18.48■□□□□ 0.55
MALSU1-202ENST00000466681 TTC12Q9H892 705 aaPredicted RBP18.48■□□□□ 0.55
MALSU1-202ENST00000466681 GDPD2Q9HCC8 539 aa18.48■□□□□ 0.55
MALSU1-202ENST00000466681 CHGAP10645 457 aaKnown RBP18.48■□□□□ 0.55
MALSU1-202ENST00000466681 TRAK1Q9UPV9 953 aa18.47■□□□□ 0.55
MALSU1-202ENST00000466681 ATP2B3Q16720 1220 aa18.47■□□□□ 0.55
MALSU1-202ENST00000466681 ITSN2Q9NZM3 1697 aa18.47■□□□□ 0.55
MALSU1-202ENST00000466681 NUCB2P80303 420 aa18.47■□□□□ 0.55
MALSU1-202ENST00000466681 HS1BP3Q53T59 392 aa18.47■□□□□ 0.55
MALSU1-202ENST00000466681 ZNF710Q8N1W2 664 aa18.45■□□□□ 0.54
MALSU1-202ENST00000466681 LRSAM1Q6UWE0 723 aa18.44■□□□□ 0.54
MALSU1-202ENST00000466681 VGLL3A8MV65 326 aa18.44■□□□□ 0.54
MALSU1-202ENST00000466681 C16orf71Q8IYS4 520 aaPredicted RBP18.44■□□□□ 0.54
MALSU1-202ENST00000466681 NSD3Q9BZ95 1437 aa18.44■□□□□ 0.54
MALSU1-202ENST00000466681 SAFB2Q14151 953 aaKnown RBP eCLIP18.44■□□□□ 0.54
MALSU1-202ENST00000466681 USP25Q9UHP3 1055 aa18.43■□□□□ 0.54
MALSU1-202ENST00000466681 PLXNC1O60486 1568 aa18.43■□□□□ 0.54
MALSU1-202ENST00000466681 CCDC141Q6ZP82 1450 aa18.42■□□□□ 0.54
MALSU1-202ENST00000466681 POLR3AO14802 1390 aaPredicted RBP18.42■□□□□ 0.54
MALSU1-202ENST00000466681 ZBTB22O15209 634 aa18.42■□□□□ 0.54
MALSU1-202ENST00000466681 CDC45O75419 566 aa18.42■□□□□ 0.54
MALSU1-202ENST00000466681 PDE4CQ08493 712 aa18.42■□□□□ 0.54
MALSU1-202ENST00000466681 UHRF1BP1LA0JNW5 1464 aa18.42■□□□□ 0.54
MALSU1-202ENST00000466681 MYRIPQ8NFW9 859 aa18.41■□□□□ 0.54
MALSU1-202ENST00000466681 ABCC10Q5T3U5 1492 aa18.41■□□□□ 0.54
MALSU1-202ENST00000466681 SCAF11Q99590 1463 aaKnown RBP18.41■□□□□ 0.54
MALSU1-202ENST00000466681 IBTKQ9P2D0 1353 aaPredicted RBP18.41■□□□□ 0.54
MALSU1-202ENST00000466681 IPO8O15397 1037 aaKnown RBP18.41■□□□□ 0.54
MALSU1-202ENST00000466681 ATAD2Q6PL18 1390 aa18.4■□□□□ 0.54
MALSU1-202ENST00000466681 PHF23Q9BUL5 403 aaPredicted RBP18.4■□□□□ 0.54
MALSU1-202ENST00000466681 ZDHHC9Q9Y397 364 aa18.4■□□□□ 0.54
MALSU1-202ENST00000466681 U2AF2P26368 475 aaKnown RBP eCLIP18.4■□□□□ 0.54
MALSU1-202ENST00000466681 UTP14CQ5TAP6 766 aaKnown RBP18.4■□□□□ 0.54
MALSU1-202ENST00000466681 CGNQ9P2M7 1197 aaKnown RBP18.4■□□□□ 0.54
MALSU1-202ENST00000466681 RABEP1Q15276 862 aa18.39■□□□□ 0.54
MALSU1-202ENST00000466681 THUMPD2Q9BTF0 503 aaKnown RBP18.39■□□□□ 0.54
MALSU1-202ENST00000466681 CDC42BPAQ5VT25 1732 aa18.39■□□□□ 0.53
MALSU1-202ENST00000466681 GSPT1P15170 499 aaKnown RBP18.39■□□□□ 0.53
MALSU1-202ENST00000466681 OTUD7AQ8TE49 926 aaPredicted RBP18.39■□□□□ 0.53
MALSU1-202ENST00000466681 NOLC1Q14978 699 aaKnown RBP eCLIP18.39■□□□□ 0.53
MALSU1-202ENST00000466681 KIF3AQ9Y496 699 aa18.39■□□□□ 0.53
MALSU1-202ENST00000466681 NPC1L1Q9UHC9 1359 aa18.38■□□□□ 0.53
MALSU1-202ENST00000466681 SCAPERQ9BY12 1400 aa18.38■□□□□ 0.53
MALSU1-202ENST00000466681 TMPOP42166 694 aaKnown RBP18.38■□□□□ 0.53
MALSU1-202ENST00000466681 LAMC1P11047 1609 aa18.38■□□□□ 0.53
MALSU1-202ENST00000466681 TMEM132EQ6IEE7 984 aa18.38■□□□□ 0.53
MALSU1-202ENST00000466681 CHMP4BQ9H444 224 aaKnown RBP18.38■□□□□ 0.53
MALSU1-202ENST00000466681 TSPY26PQ9H489 355 aa18.38■□□□□ 0.53
MALSU1-202ENST00000466681 ADGRF5Q8IZF2 1346 aa18.37■□□□□ 0.53
MALSU1-202ENST00000466681 DTNBO60941 627 aa18.37■□□□□ 0.53
MALSU1-202ENST00000466681 ZCCHC11Q5TAX3 1644 aaKnown RBP18.37■□□□□ 0.53
MALSU1-202ENST00000466681 SYNMO15061 1565 aa18.37■□□□□ 0.53
MALSU1-202ENST00000466681 MCM5P33992 734 aa18.36■□□□□ 0.53
MALSU1-202ENST00000466681 ZNF771Q7L3S4 317 aaPredicted RBP18.36■□□□□ 0.53
MALSU1-202ENST00000466681 SHANK2Q9UPX8 1470 aa18.36■□□□□ 0.53
MALSU1-202ENST00000466681 ST18O60284 1047 aa18.36■□□□□ 0.53
MALSU1-202ENST00000466681 PDCL2Q8N4E4 241 aa18.36■□□□□ 0.53
MALSU1-202ENST00000466681 BCL2L12Q9HB09 334 aa18.36■□□□□ 0.53
MALSU1-202ENST00000466681 CLEC17AQ6ZS10 378 aa18.36■□□□□ 0.53
MALSU1-202ENST00000466681 TRIM35Q9UPQ4 493 aa18.36■□□□□ 0.53
MALSU1-202ENST00000466681 MYO5CQ9NQX4 1742 aa18.35■□□□□ 0.53
MALSU1-202ENST00000466681 SMARCA5O60264 1052 aaPredicted RBP18.35■□□□□ 0.53
MALSU1-202ENST00000466681 SIRT2Q8IXJ6 389 aa18.35■□□□□ 0.53
MALSU1-202ENST00000466681 NEK4P51957 841 aa18.35■□□□□ 0.53
MALSU1-202ENST00000466681 NUTM2DQ5VT03 806 aaPredicted RBP18.35■□□□□ 0.53
MALSU1-202ENST00000466681 SPC24Q8NBT2 197 aa18.35■□□□□ 0.53
MALSU1-202ENST00000466681 GGNBP2Q9H3C7 697 aa18.35■□□□□ 0.53
MALSU1-202ENST00000466681 EIF2AK4Q9P2K8 1649 aaKnown RBP18.34■□□□□ 0.53
MALSU1-202ENST00000466681 GADD45BO75293 160 aaPredicted RBP18.34■□□□□ 0.53
MALSU1-202ENST00000466681 GTF2E1P29083 439 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms