RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 ZNF784Q8NCA9 323 aaPredicted RBP22.37■■□□□ 1.17
HMGXB4-206ENST00000466438 TMEM132EQ6IEE7 984 aa22.35■■□□□ 1.17
HMGXB4-206ENST00000466438 YTHDC2Q9H6S0 1430 aaKnown RBP22.34■■□□□ 1.17
HMGXB4-206ENST00000466438 TRPM3Q9HCF6 1732 aaPredicted RBP22.34■■□□□ 1.17
HMGXB4-206ENST00000466438 SIRT1Q96EB6 747 aa22.33■■□□□ 1.17
HMGXB4-206ENST00000466438 ALS2Q96Q42 1657 aa22.33■■□□□ 1.16
HMGXB4-206ENST00000466438 SPATA31A1Q5TZJ5 1347 aa22.32■■□□□ 1.16
HMGXB4-206ENST00000466438 ANKARQ7Z5J8 1434 aa22.3■■□□□ 1.16
HMGXB4-206ENST00000466438 ANKRD30BQ9BXX2 1392 aa22.29■■□□□ 1.16
HMGXB4-206ENST00000466438 PMFBP1Q8TBY8 1022 aa22.29■■□□□ 1.16
HMGXB4-206ENST00000466438 PRDM11Q9NQV5 511 aa22.29■■□□□ 1.16
HMGXB4-206ENST00000466438 PIK3C2GO75747 1445 aa22.29■■□□□ 1.16
HMGXB4-206ENST00000466438 CRYBG1Q9Y4K1 1723 aa22.28■■□□□ 1.16
HMGXB4-206ENST00000466438 C1QTNF8P60827 252 aa22.28■■□□□ 1.16
HMGXB4-206ENST00000466438 GPRASP1Q5JY77 1395 aa22.25■■□□□ 1.15
HMGXB4-206ENST00000466438 PDE3BQ13370 1112 aa22.25■■□□□ 1.15
HMGXB4-206ENST00000466438 UTRNP46939 3433 aa22.25■■□□□ 1.15
HMGXB4-206ENST00000466438 NRKQ7Z2Y5 1582 aa22.25■■□□□ 1.15
HMGXB4-206ENST00000466438 SPATA31E1Q6ZUB1 1445 aa22.23■■□□□ 1.15
HMGXB4-206ENST00000466438 BARGINQ6ZT62 677 aa22.22■■□□□ 1.15
HMGXB4-206ENST00000466438 SLC4A1APQ9BWU0 796 aaKnown RBP22.22■■□□□ 1.15
HMGXB4-206ENST00000466438 ACIN1Q9UKV3 1341 aaKnown RBP22.22■■□□□ 1.15
HMGXB4-206ENST00000466438 CASZ1Q86V15 1759 aa22.21■■□□□ 1.15
HMGXB4-206ENST00000466438 RGL3Q3MIN7 710 aa22.21■■□□□ 1.15
HMGXB4-206ENST00000466438 STRN4Q9NRL3 753 aa22.21■■□□□ 1.15
HMGXB4-206ENST00000466438 KIAA0232Q92628 1395 aa22.21■■□□□ 1.15
HMGXB4-206ENST00000466438 SAFB2Q14151 953 aaKnown RBP eCLIP22.19■■□□□ 1.14
HMGXB4-206ENST00000466438 PRAM1Q96QH2 718 aa22.19■■□□□ 1.14
HMGXB4-206ENST00000466438 RGPD3A6NKT7 1758 aaPredicted RBP22.19■■□□□ 1.14
HMGXB4-206ENST00000466438 RGPD4Q7Z3J3 1758 aa22.19■■□□□ 1.14
HMGXB4-206ENST00000466438 USP35Q9P2H5 1018 aa22.18■■□□□ 1.14
HMGXB4-206ENST00000466438 MYOM1P52179 1685 aa22.17■■□□□ 1.14
HMGXB4-206ENST00000466438 DHX57Q6P158 1386 aaKnown RBP22.17■■□□□ 1.14
HMGXB4-206ENST00000466438 CHRNA2Q15822 529 aa22.17■■□□□ 1.14
HMGXB4-206ENST00000466438 CHD4Q14839 1912 aa22.17■■□□□ 1.14
HMGXB4-206ENST00000466438 C14orf93Q9H972 538 aaKnown RBP22.16■■□□□ 1.14
HMGXB4-206ENST00000466438 SSH2Q76I76 1423 aa22.15■■□□□ 1.14
HMGXB4-206ENST00000466438 EIF3AQ14152 1382 aaKnown RBP22.14■■□□□ 1.14
HMGXB4-206ENST00000466438 PHRF1Q9P1Y6 1649 aaKnown RBP22.14■■□□□ 1.14
HMGXB4-206ENST00000466438 C11orf95C9JLR9 678 aaPredicted RBP22.14■■□□□ 1.13
HMGXB4-206ENST00000466438 PAK3O75914 559 aaPredicted RBP22.14■■□□□ 1.13
HMGXB4-206ENST00000466438 ANO8Q9HCE9 1232 aaPredicted RBP22.14■■□□□ 1.13
HMGXB4-206ENST00000466438 DLC1Q96QB1 1528 aa22.14■■□□□ 1.13
HMGXB4-206ENST00000466438 PTGER2P43116 358 aa22.13■■□□□ 1.13
HMGXB4-206ENST00000466438 TCP11L2Q8N4U5 519 aa22.12■■□□□ 1.13
HMGXB4-206ENST00000466438 POGKQ9P215 609 aa22.12■■□□□ 1.13
HMGXB4-206ENST00000466438 TULP4Q9NRJ4 1543 aa22.11■■□□□ 1.13
HMGXB4-206ENST00000466438 PRR36Q9H6K5 1346 aa22.11■■□□□ 1.13
HMGXB4-206ENST00000466438 PLSCR1O15162 318 aa22.11■■□□□ 1.13
HMGXB4-206ENST00000466438 ZBTB7AO95365 584 aa22.11■■□□□ 1.13
HMGXB4-206ENST00000466438 EVA1CP58658 441 aa22.11■■□□□ 1.13
HMGXB4-206ENST00000466438 SYT17Q9BSW7 474 aa22.1■■□□□ 1.13
HMGXB4-206ENST00000466438 PDGFDQ9GZP0 370 aaPredicted RBP22.1■■□□□ 1.13
HMGXB4-206ENST00000466438 PARP4Q9UKK3 1724 aaKnown RBP22.1■■□□□ 1.13
HMGXB4-206ENST00000466438 ZC3H6P61129 1189 aaKnown RBP22.09■■□□□ 1.13
HMGXB4-206ENST00000466438 NGDNQ8NEJ9 315 aaKnown RBP22.09■■□□□ 1.13
HMGXB4-206ENST00000466438 FHDC1Q9C0D6 1143 aaPredicted RBP22.09■■□□□ 1.13
HMGXB4-206ENST00000466438 OVOS2A0A0G2JMS6 1433 aa22.08■■□□□ 1.13
HMGXB4-206ENST00000466438 OVOS2A0A0J9YW53 1432 aa22.08■■□□□ 1.13
HMGXB4-206ENST00000466438 OVOS2Q6IE36 1432 aa22.08■■□□□ 1.13
HMGXB4-206ENST00000466438 CEP350Q5VT06 3117 aa22.08■■□□□ 1.13
HMGXB4-206ENST00000466438 CFAP70Q5T0N1 1121 aa22.08■■□□□ 1.13
HMGXB4-206ENST00000466438 LARP1Q6PKG0 1096 aaKnown RBP22.08■■□□□ 1.13
HMGXB4-206ENST00000466438 THRAP3Q9Y2W1 955 aaKnown RBP22.08■■□□□ 1.13
HMGXB4-206ENST00000466438 PEAK1Q9H792 1746 aa22.07■■□□□ 1.12
HMGXB4-206ENST00000466438 ATP7BP35670 1465 aa22.07■■□□□ 1.12
HMGXB4-206ENST00000466438 GIGYF1O75420 1035 aaPredicted RBP22.06■■□□□ 1.12
HMGXB4-206ENST00000466438 HIRIP3Q9BW71 556 aaPredicted RBP22.06■■□□□ 1.12
HMGXB4-206ENST00000466438 BCL11BQ9C0K0 894 aaPredicted RBP22.05■■□□□ 1.12
HMGXB4-206ENST00000466438 ATF5Q9Y2D1 282 aaPredicted RBP22.05■■□□□ 1.12
HMGXB4-206ENST00000466438 LMO7Q8WWI1 1683 aa22.04■■□□□ 1.12
HMGXB4-206ENST00000466438 ADRA2BP18089 450 aa22.04■■□□□ 1.12
HMGXB4-206ENST00000466438 SBF2Q86WG5 1849 aa22.03■■□□□ 1.12
HMGXB4-206ENST00000466438 MINK1Q8N4C8 1332 aaPredicted RBP22.02■■□□□ 1.12
HMGXB4-206ENST00000466438 WASLO00401 505 aaPredicted RBP22.01■■□□□ 1.11
HMGXB4-206ENST00000466438 CPDO75976 1380 aa22■■□□□ 1.11
HMGXB4-206ENST00000466438 MTFR1LQ9H019 292 aa22■■□□□ 1.11
HMGXB4-206ENST00000466438 ITSN1Q15811 1721 aa22■■□□□ 1.11
HMGXB4-206ENST00000466438 PROM2Q8N271 834 aa21.99■■□□□ 1.11
HMGXB4-206ENST00000466438 SGIP1Q9BQI5 828 aa21.99■■□□□ 1.11
HMGXB4-206ENST00000466438 NUTM2GQ5VZR2 741 aa21.98■■□□□ 1.11
HMGXB4-206ENST00000466438 STK32BQ9NY57 414 aa21.98■■□□□ 1.11
HMGXB4-206ENST00000466438 ADGRB1O14514 1584 aa21.98■■□□□ 1.11
HMGXB4-206ENST00000466438 LRRC37A3O60309 1634 aa21.98■■□□□ 1.11
HMGXB4-206ENST00000466438 MAP3K5Q99683 1374 aa21.98■■□□□ 1.11
HMGXB4-206ENST00000466438 COL5A2P05997 1499 aaPredicted RBP21.96■■□□□ 1.11
HMGXB4-206ENST00000466438 PTF1AQ7RTS3 328 aa21.96■■□□□ 1.11
HMGXB4-206ENST00000466438 TRAK1Q9UPV9 953 aa21.96■■□□□ 1.11
HMGXB4-206ENST00000466438 CRB1P82279 1406 aa21.96■■□□□ 1.11
HMGXB4-206ENST00000466438 SLC15A2Q16348 729 aa21.95■■□□□ 1.1
HMGXB4-206ENST00000466438 BCL9O00512 1426 aa21.93■■□□□ 1.1
HMGXB4-206ENST00000466438 DDB1Q16531 1140 aa21.93■■□□□ 1.1
HMGXB4-206ENST00000466438 PPARGC1BQ86YN6 1023 aaKnown RBP21.93■■□□□ 1.1
HMGXB4-206ENST00000466438 ARXQ96QS3 562 aa21.93■■□□□ 1.1
HMGXB4-206ENST00000466438 USP19O94966 1318 aa21.92■■□□□ 1.1
HMGXB4-206ENST00000466438 GPR162Q16538 588 aa21.91■■□□□ 1.1
HMGXB4-206ENST00000466438 TXNRD1Q16881 649 aa21.91■■□□□ 1.1
HMGXB4-206ENST00000466438 NUDT16Q96DE0 195 aaKnown RBP21.91■■□□□ 1.1
HMGXB4-206ENST00000466438 POLR3AO14802 1390 aaPredicted RBP21.9■■□□□ 1.1
HMGXB4-206ENST00000466438 SHANK3Q9BYB0 1731 aa21.89■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms