RNA–Protein interactions for RNA: ENST00000466391.1

LSG1-206, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 791 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-206ENST00000466391 BANK1Q8NDB2 785 aa12.79□□□□□ -0.36
LSG1-206ENST00000466391 LRRN4Q8WUT4 740 aa12.78□□□□□ -0.36
LSG1-206ENST00000466391 ERICH3Q5RHP9 1530 aa12.78□□□□□ -0.36
LSG1-206ENST00000466391 PPEF1O14829 653 aaPredicted RBP12.77□□□□□ -0.37
LSG1-206ENST00000466391 GGCXP38435 758 aa12.77□□□□□ -0.37
LSG1-206ENST00000466391 PPP1R18Q6NYC8 613 aa12.77□□□□□ -0.37
LSG1-206ENST00000466391 SNRKQ9NRH2 765 aa12.77□□□□□ -0.37
LSG1-206ENST00000466391 CUX1P39880 1505 aa12.77□□□□□ -0.37
LSG1-206ENST00000466391 PTPRNQ16849 979 aa12.76□□□□□ -0.37
LSG1-206ENST00000466391 IFFO2Q5TF58 517 aa12.76□□□□□ -0.37
LSG1-206ENST00000466391 CCDC24Q8N4L8 307 aa12.75□□□□□ -0.37
LSG1-206ENST00000466391 NUDT12Q9BQG2 462 aa12.75□□□□□ -0.37
LSG1-206ENST00000466391 CC2D2AQ9P2K1 1620 aa12.75□□□□□ -0.37
LSG1-206ENST00000466391 RNF223E7ERA6 249 aa12.74□□□□□ -0.37
LSG1-206ENST00000466391 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.74□□□□□ -0.37
LSG1-206ENST00000466391 FCF1Q9Y324 198 aaKnown RBP12.74□□□□□ -0.37
LSG1-206ENST00000466391 CCNYL3P0C7X3 344 aa12.73□□□□□ -0.37
LSG1-206ENST00000466391 FLIIQ13045 1269 aa12.73□□□□□ -0.37
LSG1-206ENST00000466391 MCM6Q14566 821 aa12.73□□□□□ -0.37
LSG1-206ENST00000466391 CADPSQ9ULU8 1353 aa12.72□□□□□ -0.37
LSG1-206ENST00000466391 ZEB1P37275 1124 aaPredicted RBP12.72□□□□□ -0.37
LSG1-206ENST00000466391 HMX1Q9NP08 348 aaPredicted RBP12.72□□□□□ -0.37
LSG1-206ENST00000466391 PRXQ9BXM0 1461 aa12.72□□□□□ -0.37
LSG1-206ENST00000466391 CTHP32929 405 aa12.71□□□□□ -0.37
LSG1-206ENST00000466391 MTMR14Q8NCE2 650 aa12.71□□□□□ -0.37
LSG1-206ENST00000466391 EVA1BQ9NVM1 165 aa12.7□□□□□ -0.38
LSG1-206ENST00000466391 MAP10Q9P2G4 905 aa12.7□□□□□ -0.38
LSG1-206ENST00000466391 ANKLE1Q8NAG6 615 aa12.69□□□□□ -0.38
LSG1-206ENST00000466391 RAPGEF2Q9Y4G8 1499 aa12.68□□□□□ -0.38
LSG1-206ENST00000466391 F12P00748 615 aaPredicted RBP12.68□□□□□ -0.38
LSG1-206ENST00000466391 KCNH2Q12809 1159 aa12.68□□□□□ -0.38
LSG1-206ENST00000466391 NR6A1Q15406 480 aa12.68□□□□□ -0.38
LSG1-206ENST00000466391 A0A0G2JS52 829 aa12.67□□□□□ -0.38
LSG1-206ENST00000466391 EPS8L1Q8TE68 723 aa12.67□□□□□ -0.38
LSG1-206ENST00000466391 KIF27Q86VH2 1401 aa12.67□□□□□ -0.38
LSG1-206ENST00000466391 UBTFP17480 764 aaKnown RBP12.66□□□□□ -0.38
LSG1-206ENST00000466391 CLIP1P30622 1438 aa12.65□□□□□ -0.38
LSG1-206ENST00000466391 PLA2G2CQ5R387 149 aa12.65□□□□□ -0.38
LSG1-206ENST00000466391 PTCRAQ6ISU1 281 aaPredicted RBP12.65□□□□□ -0.38
LSG1-206ENST00000466391 GJD4Q96KN9 370 aaPredicted RBP12.65□□□□□ -0.38
LSG1-206ENST00000466391 TRIM34Q9BYJ4 488 aa12.65□□□□□ -0.38
LSG1-206ENST00000466391 APBB1O00213 710 aa12.64□□□□□ -0.39
LSG1-206ENST00000466391 VPS8Q8N3P4 1428 aa12.63□□□□□ -0.39
LSG1-206ENST00000466391 SOCS7O14512 581 aa12.62□□□□□ -0.39
LSG1-206ENST00000466391 UNC93B1Q9H1C4 597 aa12.62□□□□□ -0.39
LSG1-206ENST00000466391 ZBTB24O43167 697 aaPredicted RBP12.61□□□□□ -0.39
LSG1-206ENST00000466391 C14orf37Q86TY3 774 aa12.59□□□□□ -0.39
LSG1-206ENST00000466391 PRM3Q9NNZ6 103 aa12.59□□□□□ -0.39
LSG1-206ENST00000466391 TBC1D2BQ9UPU7 963 aa12.59□□□□□ -0.39
LSG1-206ENST00000466391 NDUFB9Q9Y6M9 179 aa12.59□□□□□ -0.39
LSG1-206ENST00000466391 POM121Q96HA1 1249 aa12.58□□□□□ -0.4
LSG1-206ENST00000466391 GDPD2Q9HCC8 539 aa12.58□□□□□ -0.4
LSG1-206ENST00000466391 DNMBPQ6XZF7 1577 aa12.57□□□□□ -0.4
LSG1-206ENST00000466391 LAMC3Q9Y6N6 1575 aa12.57□□□□□ -0.4
LSG1-206ENST00000466391 RAD21O60216 631 aa12.57□□□□□ -0.4
LSG1-206ENST00000466391 COG6Q9Y2V7 657 aa12.57□□□□□ -0.4
LSG1-206ENST00000466391 FANCD2Q9BXW9 1451 aa12.57□□□□□ -0.4
LSG1-206ENST00000466391 LIAT1Q6ZQX7 453 aa12.56□□□□□ -0.4
LSG1-206ENST00000466391 PNMA1Q8ND90 353 aa12.56□□□□□ -0.4
LSG1-206ENST00000466391 ARMC2Q8NEN0 867 aa12.56□□□□□ -0.4
LSG1-206ENST00000466391 CLUAP1Q96AJ1 413 aa12.56□□□□□ -0.4
LSG1-206ENST00000466391 FKBPLQ9UIM3 349 aa12.56□□□□□ -0.4
LSG1-206ENST00000466391 FGD5Q6ZNL6 1462 aa12.55□□□□□ -0.4
LSG1-206ENST00000466391 LINC01559Q495D7 138 aa12.55□□□□□ -0.4
LSG1-206ENST00000466391 BAP1Q92560 729 aa12.55□□□□□ -0.4
LSG1-206ENST00000466391 EMID1Q96A84 441 aaPredicted RBP12.55□□□□□ -0.4
LSG1-206ENST00000466391 SLC19A1P41440 591 aa12.54□□□□□ -0.4
LSG1-206ENST00000466391 ABL2P42684 1182 aa12.54□□□□□ -0.4
LSG1-206ENST00000466391 RPIAP49247 311 aa12.54□□□□□ -0.4
LSG1-206ENST00000466391 TRIM32Q13049 653 aa12.54□□□□□ -0.4
LSG1-206ENST00000466391 CD2BP2O95400 341 aaKnown RBP12.52□□□□□ -0.41
LSG1-206ENST00000466391 PPARGC1BQ86YN6 1023 aaKnown RBP12.52□□□□□ -0.41
LSG1-206ENST00000466391 PRKD2Q9BZL6 878 aa12.52□□□□□ -0.41
LSG1-206ENST00000466391 CUX2O14529 1486 aa12.52□□□□□ -0.41
LSG1-206ENST00000466391 ARAP1Q96P48 1450 aa12.52□□□□□ -0.41
LSG1-206ENST00000466391 ABCA10Q8WWZ4 1543 aa12.52□□□□□ -0.41
LSG1-206ENST00000466391 GPR37L1O60883 481 aa12.51□□□□□ -0.41
LSG1-206ENST00000466391 NBPF14Q5TI25 921 aa12.51□□□□□ -0.41
LSG1-206ENST00000466391 TIMELESSQ9UNS1 1208 aa12.5□□□□□ -0.41
LSG1-206ENST00000466391 IGF1RP08069 1367 aa12.5□□□□□ -0.41
LSG1-206ENST00000466391 TOPBP1Q92547 1522 aa12.49□□□□□ -0.41
LSG1-206ENST00000466391 ZC3H4Q9UPT8 1303 aaKnown RBP12.49□□□□□ -0.41
LSG1-206ENST00000466391 SH3BP2P78314 561 aa12.49□□□□□ -0.41
LSG1-206ENST00000466391 ZNF511Q8NB15 262 aa12.49□□□□□ -0.41
LSG1-206ENST00000466391 GPKOWQ92917 476 aaPredicted RBP eCLIP12.49□□□□□ -0.41
LSG1-206ENST00000466391 ERICH6Q7L0X2 663 aa12.48□□□□□ -0.41
LSG1-206ENST00000466391 ZMYND15Q9H091 742 aa12.48□□□□□ -0.41
LSG1-206ENST00000466391 IRF5Q13568 498 aa12.47□□□□□ -0.41
LSG1-206ENST00000466391 AGERQ15109 404 aa12.47□□□□□ -0.41
LSG1-206ENST00000466391 SPRYD7Q5W111 196 aa12.47□□□□□ -0.41
LSG1-206ENST00000466391 PDXDC2PQ6P474 469 aa12.47□□□□□ -0.41
LSG1-206ENST00000466391 WDR97A6NE52 1622 aa12.47□□□□□ -0.41
LSG1-206ENST00000466391 SKOR1P84550 965 aa12.46□□□□□ -0.41
LSG1-206ENST00000466391 FOXJ1Q92949 421 aa12.46□□□□□ -0.41
LSG1-206ENST00000466391 V9GY48 417 aaPredicted RBP12.46□□□□□ -0.41
LSG1-206ENST00000466391 POLA1P09884 1462 aaPredicted RBP12.46□□□□□ -0.42
LSG1-206ENST00000466391 CUL7Q14999 1698 aa12.45□□□□□ -0.42
LSG1-206ENST00000466391 A6NJR5 290 aa12.45□□□□□ -0.42
LSG1-206ENST00000466391 WNT7BP56706 349 aa12.45□□□□□ -0.42
LSG1-206ENST00000466391 PROSER2Q86WR7 435 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms