RNA–Protein interactions for RNA: ENST00000466217.5

ATG9A-219, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-219ENST00000466217 HIRIP3Q9BW71 556 aaPredicted RBP20.28■□□□□ 0.84
ATG9A-219ENST00000466217 SPATA31A5Q5VU36 1347 aa20.27■□□□□ 0.84
ATG9A-219ENST00000466217 SPATA31A7Q8IWB4 1347 aa20.27■□□□□ 0.84
ATG9A-219ENST00000466217 MINK1Q8N4C8 1332 aaPredicted RBP20.27■□□□□ 0.84
ATG9A-219ENST00000466217 CRYBG1Q9Y4K1 1723 aa20.27■□□□□ 0.83
ATG9A-219ENST00000466217 RAB3GAP2Q9H2M9 1393 aa20.26■□□□□ 0.83
ATG9A-219ENST00000466217 DISP2A7MBM2 1401 aa20.26■□□□□ 0.83
ATG9A-219ENST00000466217 RGPD1P0DJD0 1748 aa20.25■□□□□ 0.83
ATG9A-219ENST00000466217 NGDNQ8NEJ9 315 aaKnown RBP20.25■□□□□ 0.83
ATG9A-219ENST00000466217 THSD7AQ9UPZ6 1657 aa20.25■□□□□ 0.83
ATG9A-219ENST00000466217 HRCP23327 699 aa20.23■□□□□ 0.83
ATG9A-219ENST00000466217 PRDM11Q9NQV5 511 aa20.23■□□□□ 0.83
ATG9A-219ENST00000466217 DCAF11Q8TEB1 546 aa20.22■□□□□ 0.83
ATG9A-219ENST00000466217 ITSN1Q15811 1721 aa20.22■□□□□ 0.83
ATG9A-219ENST00000466217 PAK3O75914 559 aaPredicted RBP20.21■□□□□ 0.83
ATG9A-219ENST00000466217 ATP7BP35670 1465 aa20.21■□□□□ 0.83
ATG9A-219ENST00000466217 PSDA5PKW4 1024 aaPredicted RBP20.2■□□□□ 0.82
ATG9A-219ENST00000466217 EN1Q05925 392 aaPredicted RBP20.2■□□□□ 0.82
ATG9A-219ENST00000466217 KDM2AQ9Y2K7 1162 aa20.2■□□□□ 0.82
ATG9A-219ENST00000466217 SPATA31A1Q5TZJ5 1347 aa20.19■□□□□ 0.82
ATG9A-219ENST00000466217 ARHGEF28Q8N1W1 1705 aaKnown RBP20.19■□□□□ 0.82
ATG9A-219ENST00000466217 NUDT16Q96DE0 195 aaKnown RBP20.18■□□□□ 0.82
ATG9A-219ENST00000466217 TNS1Q9HBL0 1735 aaKnown RBP20.18■□□□□ 0.82
ATG9A-219ENST00000466217 KIAA0232Q92628 1395 aa20.18■□□□□ 0.82
ATG9A-219ENST00000466217 PHRF1Q9P1Y6 1649 aaKnown RBP20.16■□□□□ 0.82
ATG9A-219ENST00000466217 FAM182BQ5T319 152 aa20.16■□□□□ 0.82
ATG9A-219ENST00000466217 POLR3AO14802 1390 aaPredicted RBP20.16■□□□□ 0.82
ATG9A-219ENST00000466217 FAM196AQ6ZSG2 479 aa20.15■□□□□ 0.82
ATG9A-219ENST00000466217 PARD3Q8TEW0 1356 aa20.14■□□□□ 0.81
ATG9A-219ENST00000466217 CHRNA2Q15822 529 aa20.13■□□□□ 0.81
ATG9A-219ENST00000466217 R3HDM1Q15032 1099 aaKnown RBP20.12■□□□□ 0.81
ATG9A-219ENST00000466217 EZH2Q15910 746 aaKnown RBP20.12■□□□□ 0.81
ATG9A-219ENST00000466217 BARGINQ6ZT62 677 aa20.12■□□□□ 0.81
ATG9A-219ENST00000466217 CAMKK2Q96RR4 588 aa20.12■□□□□ 0.81
ATG9A-219ENST00000466217 CDK19Q9BWU1 502 aa20.12■□□□□ 0.81
ATG9A-219ENST00000466217 CCDC61Q9Y6R9 512 aa20.12■□□□□ 0.81
ATG9A-219ENST00000466217 TOPAZ1Q8N9V7 1692 aa20.12■□□□□ 0.81
ATG9A-219ENST00000466217 PLEKHG3A1L390 1219 aa20.11■□□□□ 0.81
ATG9A-219ENST00000466217 STRN4Q9NRL3 753 aa20.11■□□□□ 0.81
ATG9A-219ENST00000466217 SSH2Q76I76 1423 aa20.1■□□□□ 0.81
ATG9A-219ENST00000466217 ZC3H6P61129 1189 aaKnown RBP20.1■□□□□ 0.81
ATG9A-219ENST00000466217 NBPF8Q3BBV2 869 aa20.1■□□□□ 0.81
ATG9A-219ENST00000466217 CPDO75976 1380 aa20.09■□□□□ 0.81
ATG9A-219ENST00000466217 ACEP12821 1306 aa20.09■□□□□ 0.81
ATG9A-219ENST00000466217 TRIM37O94972 964 aa20.09■□□□□ 0.81
ATG9A-219ENST00000466217 NRKQ7Z2Y5 1582 aa20.08■□□□□ 0.81
ATG9A-219ENST00000466217 KIAA1210Q9ULL0 1709 aa20.07■□□□□ 0.8
ATG9A-219ENST00000466217 USP19O94966 1318 aa20.07■□□□□ 0.8
ATG9A-219ENST00000466217 EVA1CP58658 441 aa20.07■□□□□ 0.8
ATG9A-219ENST00000466217 LMO7Q8WWI1 1683 aa20.07■□□□□ 0.8
ATG9A-219ENST00000466217 CAMTA1Q9Y6Y1 1673 aa20.07■□□□□ 0.8
ATG9A-219ENST00000466217 APBA3O96018 575 aa20.06■□□□□ 0.8
ATG9A-219ENST00000466217 PDE3BQ13370 1112 aa20.06■□□□□ 0.8
ATG9A-219ENST00000466217 NUTM2GQ5VZR2 741 aa20.06■□□□□ 0.8
ATG9A-219ENST00000466217 THRAP3Q9Y2W1 955 aaKnown RBP20.06■□□□□ 0.8
ATG9A-219ENST00000466217 TCP11L2Q8N4U5 519 aa20.05■□□□□ 0.8
ATG9A-219ENST00000466217 ABTB2Q8N961 1025 aa20.05■□□□□ 0.8
ATG9A-219ENST00000466217 BRD4O60885 1362 aaPredicted RBP20.05■□□□□ 0.8
ATG9A-219ENST00000466217 RREB1Q92766 1687 aa20.04■□□□□ 0.8
ATG9A-219ENST00000466217 USP35Q9P2H5 1018 aa20.04■□□□□ 0.8
ATG9A-219ENST00000466217 C11orf95C9JLR9 678 aaPredicted RBP20.03■□□□□ 0.8
ATG9A-219ENST00000466217 LARP1Q6PKG0 1096 aaKnown RBP20.03■□□□□ 0.8
ATG9A-219ENST00000466217 NLRP13Q86W25 1043 aa20.02■□□□□ 0.8
ATG9A-219ENST00000466217 GCP02774 474 aa20.01■□□□□ 0.79
ATG9A-219ENST00000466217 NUP188Q5SRE5 1749 aa20■□□□□ 0.79
ATG9A-219ENST00000466217 COL5A2P05997 1499 aaPredicted RBP19.99■□□□□ 0.79
ATG9A-219ENST00000466217 PARP4Q9UKK3 1724 aaKnown RBP19.99■□□□□ 0.79
ATG9A-219ENST00000466217 NBPF14Q5TI25 921 aa19.99■□□□□ 0.79
ATG9A-219ENST00000466217 PPIP5K1Q6PFW1 1433 aa19.99■□□□□ 0.79
ATG9A-219ENST00000466217 CRB1P82279 1406 aa19.97■□□□□ 0.79
ATG9A-219ENST00000466217 SRPK2P78362 688 aaKnown RBP19.97■□□□□ 0.79
ATG9A-219ENST00000466217 NBPF1Q3BBV0 1214 aa19.97■□□□□ 0.79
ATG9A-219ENST00000466217 CENPJQ9HC77 1338 aaPredicted RBP19.97■□□□□ 0.79
ATG9A-219ENST00000466217 AATKQ6ZMQ8 1374 aa19.95■□□□□ 0.78
ATG9A-219ENST00000466217 OVOS2A0A0G2JMS6 1433 aa19.94■□□□□ 0.78
ATG9A-219ENST00000466217 OVOS2A0A0J9YW53 1432 aa19.94■□□□□ 0.78
ATG9A-219ENST00000466217 OVOS2Q6IE36 1432 aa19.94■□□□□ 0.78
ATG9A-219ENST00000466217 SLIT3O75094 1523 aa19.94■□□□□ 0.78
ATG9A-219ENST00000466217 USP6P35125 1406 aa19.93■□□□□ 0.78
ATG9A-219ENST00000466217 CABP2Q9NPB3 220 aa19.93■□□□□ 0.78
ATG9A-219ENST00000466217 PEAK1Q9H792 1746 aa19.93■□□□□ 0.78
ATG9A-219ENST00000466217 RGPD3A6NKT7 1758 aaPredicted RBP19.93■□□□□ 0.78
ATG9A-219ENST00000466217 RGPD4Q7Z3J3 1758 aa19.93■□□□□ 0.78
ATG9A-219ENST00000466217 PLSCR1O15162 318 aa19.91■□□□□ 0.78
ATG9A-219ENST00000466217 SPON1Q9HCB6 807 aa19.91■□□□□ 0.78
ATG9A-219ENST00000466217 NLRP6P59044 892 aa19.9■□□□□ 0.78
ATG9A-219ENST00000466217 QRICH2Q9H0J4 1663 aa19.9■□□□□ 0.78
ATG9A-219ENST00000466217 KCNQ2O43526 872 aa19.89■□□□□ 0.77
ATG9A-219ENST00000466217 LRRC37A3O60309 1634 aa19.89■□□□□ 0.77
ATG9A-219ENST00000466217 CABP1Q9NZU7 370 aa19.89■□□□□ 0.77
ATG9A-219ENST00000466217 BCL9O00512 1426 aa19.88■□□□□ 0.77
ATG9A-219ENST00000466217 NINLQ9Y2I6 1382 aa19.88■□□□□ 0.77
ATG9A-219ENST00000466217 DDB1Q16531 1140 aa19.87■□□□□ 0.77
ATG9A-219ENST00000466217 COL18A1P39060 1754 aa19.87■□□□□ 0.77
ATG9A-219ENST00000466217 SBF2Q86WG5 1849 aa19.86■□□□□ 0.77
ATG9A-219ENST00000466217 WDR17Q8IZU2 1322 aa19.86■□□□□ 0.77
ATG9A-219ENST00000466217 TOM1L2Q6ZVM7 507 aa19.86■□□□□ 0.77
ATG9A-219ENST00000466217 CDCA7Q9BWT1 371 aaPredicted RBP19.86■□□□□ 0.77
ATG9A-219ENST00000466217 BCL11BQ9C0K0 894 aaPredicted RBP19.86■□□□□ 0.77
ATG9A-219ENST00000466217 PIK3C2AO00443 1686 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms