RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 ST8SIA5O15466 376 aa8.47□□□□□ -1.05
EXOSC3-204ENST00000465860 SLC24A3Q9HC58 644 aa8.47□□□□□ -1.05
EXOSC3-204ENST00000465860 SKOR1P84550 965 aa8.46□□□□□ -1.06
EXOSC3-204ENST00000465860 PTCRAQ6ISU1 281 aaPredicted RBP8.46□□□□□ -1.06
EXOSC3-204ENST00000465860 MRGPRX2Q96LB1 330 aa8.46□□□□□ -1.06
EXOSC3-204ENST00000465860 NUDT12Q9BQG2 462 aa8.46□□□□□ -1.06
EXOSC3-204ENST00000465860 AAASQ9NRG9 546 aa8.46□□□□□ -1.06
EXOSC3-204ENST00000465860 TDRD9Q8NDG6 1382 aaKnown RBP8.46□□□□□ -1.06
EXOSC3-204ENST00000465860 CHD1O14646 1710 aa8.46□□□□□ -1.06
EXOSC3-204ENST00000465860 TOP2BQ02880 1626 aa8.45□□□□□ -1.06
EXOSC3-204ENST00000465860 PDE4DQ08499 809 aa8.45□□□□□ -1.06
EXOSC3-204ENST00000465860 RSBN1LQ6PCB5 846 aaPredicted RBP8.45□□□□□ -1.06
EXOSC3-204ENST00000465860 TTC24A2A3L6 582 aaPredicted RBP8.44□□□□□ -1.06
EXOSC3-204ENST00000465860 POTECB2RU33 542 aa8.44□□□□□ -1.06
EXOSC3-204ENST00000465860 AVPP01185 164 aa8.44□□□□□ -1.06
EXOSC3-204ENST00000465860 MTMR2Q13614 643 aa8.44□□□□□ -1.06
EXOSC3-204ENST00000465860 PRR7Q8TB68 274 aa8.44□□□□□ -1.06
EXOSC3-204ENST00000465860 PCDHB15Q9Y5E8 787 aa8.44□□□□□ -1.06
EXOSC3-204ENST00000465860 WRNQ14191 1432 aaPredicted RBP eCLIP8.44□□□□□ -1.06
EXOSC3-204ENST00000465860 GJA5P36382 358 aa8.43□□□□□ -1.06
EXOSC3-204ENST00000465860 DIXDC1Q155Q3 683 aa8.43□□□□□ -1.06
EXOSC3-204ENST00000465860 SNIP1Q8TAD8 396 aaKnown RBP8.43□□□□□ -1.06
EXOSC3-204ENST00000465860 PBRM1Q86U86 1689 aa8.43□□□□□ -1.06
EXOSC3-204ENST00000465860 SPTLC1O15269 473 aa8.42□□□□□ -1.06
EXOSC3-204ENST00000465860 CCNYL3P0C7X3 344 aa8.42□□□□□ -1.06
EXOSC3-204ENST00000465860 SMPD1P17405 629 aa8.42□□□□□ -1.06
EXOSC3-204ENST00000465860 WNT7BP56706 349 aa8.42□□□□□ -1.06
EXOSC3-204ENST00000465860 RC3H1Q5TC82 1133 aaKnown RBP8.42□□□□□ -1.06
EXOSC3-204ENST00000465860 CRIPAKQ8N1N5 446 aa8.42□□□□□ -1.06
EXOSC3-204ENST00000465860 ABCA5Q8WWZ7 1642 aa8.41□□□□□ -1.06
EXOSC3-204ENST00000465860 ABCA10Q8WWZ4 1543 aa8.41□□□□□ -1.06
EXOSC3-204ENST00000465860 SPDYE5A6NIY4 337 aa8.41□□□□□ -1.06
EXOSC3-204ENST00000465860 J3QL48 77 aa8.41□□□□□ -1.06
EXOSC3-204ENST00000465860 PTPRNQ16849 979 aa8.41□□□□□ -1.06
EXOSC3-204ENST00000465860 DACH1Q9UI36 760 aa8.41□□□□□ -1.06
EXOSC3-204ENST00000465860 DESI1Q6ICB0 168 aa8.4□□□□□ -1.06
EXOSC3-204ENST00000465860 RIC3Q7Z5B4 369 aa8.4□□□□□ -1.06
EXOSC3-204ENST00000465860 EVA1BQ9NVM1 165 aa8.4□□□□□ -1.06
EXOSC3-204ENST00000465860 SNAPC4Q5SXM2 1469 aa8.39□□□□□ -1.07
EXOSC3-204ENST00000465860 AXIN1O15169 862 aa8.39□□□□□ -1.07
EXOSC3-204ENST00000465860 HRCP23327 699 aa8.39□□□□□ -1.07
EXOSC3-204ENST00000465860 CFAP99D6REC4 459 aa8.38□□□□□ -1.07
EXOSC3-204ENST00000465860 SMCPP49901 116 aaPredicted RBP8.38□□□□□ -1.07
EXOSC3-204ENST00000465860 SH3BP2P78314 561 aa8.38□□□□□ -1.07
EXOSC3-204ENST00000465860 KCNH2Q12809 1159 aa8.38□□□□□ -1.07
EXOSC3-204ENST00000465860 CSPP1Q1MSJ5 1256 aa8.38□□□□□ -1.07
EXOSC3-204ENST00000465860 CTC1Q2NKJ3 1217 aa8.38□□□□□ -1.07
EXOSC3-204ENST00000465860 MYSM1Q5VVJ2 828 aa8.38□□□□□ -1.07
EXOSC3-204ENST00000465860 CABLES1Q8TDN4 633 aa8.38□□□□□ -1.07
EXOSC3-204ENST00000465860 ZNF775Q96BV0 537 aaPredicted RBP8.38□□□□□ -1.07
EXOSC3-204ENST00000465860 UNC93B1Q9H1C4 597 aa8.38□□□□□ -1.07
EXOSC3-204ENST00000465860 GAPVD1Q14C86 1478 aa8.38□□□□□ -1.07
EXOSC3-204ENST00000465860 ZBTB3Q9H5J0 574 aa8.37□□□□□ -1.07
EXOSC3-204ENST00000465860 LIMD1Q9UGP4 676 aa8.37□□□□□ -1.07
EXOSC3-204ENST00000465860 GRIN2BQ13224 1484 aa8.37□□□□□ -1.07
EXOSC3-204ENST00000465860 SIAH2O43255 324 aa8.36□□□□□ -1.07
EXOSC3-204ENST00000465860 PRPF38BQ5VTL8 546 aaKnown RBP8.36□□□□□ -1.07
EXOSC3-204ENST00000465860 EHBP1Q8NDI1 1231 aa8.36□□□□□ -1.07
EXOSC3-204ENST00000465860 HPS1Q92902 700 aa8.36□□□□□ -1.07
EXOSC3-204ENST00000465860 LINC01559Q495D7 138 aa8.35□□□□□ -1.07
EXOSC3-204ENST00000465860 LYPD8Q6UX82 237 aa8.35□□□□□ -1.07
EXOSC3-204ENST00000465860 BAP1Q92560 729 aa8.35□□□□□ -1.07
EXOSC3-204ENST00000465860 RIMBP3CA6NJZ7 1639 aa8.35□□□□□ -1.07
EXOSC3-204ENST00000465860 RIMBP3BA6NNM3 1639 aa8.35□□□□□ -1.07
EXOSC3-204ENST00000465860 RIMBP3Q9UFD9 1639 aa8.35□□□□□ -1.07
EXOSC3-204ENST00000465860 MAGI1Q96QZ7 1491 aaPredicted RBP8.34□□□□□ -1.07
EXOSC3-204ENST00000465860 QPCTQ16769 361 aa8.34□□□□□ -1.07
EXOSC3-204ENST00000465860 GMPR2Q9P2T1 348 aaKnown RBP8.34□□□□□ -1.07
EXOSC3-204ENST00000465860 ALDH1A1P00352 501 aa8.33□□□□□ -1.08
EXOSC3-204ENST00000465860 CTHP32929 405 aa8.33□□□□□ -1.08
EXOSC3-204ENST00000465860 BCANQ96GW7 911 aa8.33□□□□□ -1.08
EXOSC3-204ENST00000465860 CLASP1Q7Z460 1538 aa8.33□□□□□ -1.08
EXOSC3-204ENST00000465860 SYNJ2O15056 1496 aa8.32□□□□□ -1.08
EXOSC3-204ENST00000465860 ADAMTS12P58397 1594 aa8.32□□□□□ -1.08
EXOSC3-204ENST00000465860 LILRB3O75022 631 aa8.32□□□□□ -1.08
EXOSC3-204ENST00000465860 TUSC1Q2TAM9 212 aa8.32□□□□□ -1.08
EXOSC3-204ENST00000465860 ZNF511Q8NB15 262 aa8.32□□□□□ -1.08
EXOSC3-204ENST00000465860 MAP10Q9P2G4 905 aa8.32□□□□□ -1.08
EXOSC3-204ENST00000465860 ARHGEF11O15085 1522 aa8.31□□□□□ -1.08
EXOSC3-204ENST00000465860 PER1O15534 1290 aaPredicted RBP8.31□□□□□ -1.08
EXOSC3-204ENST00000465860 SLC24A1O60721 1099 aa8.31□□□□□ -1.08
EXOSC3-204ENST00000465860 F12P00748 615 aaPredicted RBP8.31□□□□□ -1.08
EXOSC3-204ENST00000465860 NUTM2BA6NNL0 878 aaPredicted RBP8.3□□□□□ -1.08
EXOSC3-204ENST00000465860 NUTM2EB1AL46 878 aaPredicted RBP8.3□□□□□ -1.08
EXOSC3-204ENST00000465860 CLK2P49760 499 aaKnown RBP8.3□□□□□ -1.08
EXOSC3-204ENST00000465860 NUTM2DQ5VT03 806 aaPredicted RBP8.3□□□□□ -1.08
EXOSC3-204ENST00000465860 NUTM2AQ8IVF1 878 aaPredicted RBP8.3□□□□□ -1.08
EXOSC3-204ENST00000465860 TSC1Q92574 1164 aa8.3□□□□□ -1.08
EXOSC3-204ENST00000465860 ATP13A2Q9NQ11 1180 aa8.3□□□□□ -1.08
EXOSC3-204ENST00000465860 ERICH3Q5RHP9 1530 aa8.29□□□□□ -1.08
EXOSC3-204ENST00000465860 RTL5Q5HYW3 569 aaPredicted RBP8.29□□□□□ -1.08
EXOSC3-204ENST00000465860 CHMP7Q8WUX9 453 aaPredicted RBP8.29□□□□□ -1.08
EXOSC3-204ENST00000465860 GPBP1L1Q9HC44 474 aaPredicted RBP8.29□□□□□ -1.08
EXOSC3-204ENST00000465860 POLR3EQ9NVU0 708 aa8.29□□□□□ -1.08
EXOSC3-204ENST00000465860 TLL2Q9Y6L7 1015 aa8.29□□□□□ -1.08
EXOSC3-204ENST00000465860 CEP170Q5SW79 1584 aa8.29□□□□□ -1.08
EXOSC3-204ENST00000465860 GRIN2AQ12879 1464 aa8.28□□□□□ -1.08
EXOSC3-204ENST00000465860 C11orf95C9JLR9 678 aaPredicted RBP8.28□□□□□ -1.08
EXOSC3-204ENST00000465860 VARSP26640 1264 aaKnown RBP8.27□□□□□ -1.09
EXOSC3-204ENST00000465860 RSPH6AQ9H0K4 717 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms