RNA–Protein interactions for RNA: ENST00000465819.1

CSMD2-207, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 5

Gene CSMD2, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-207ENST00000465819 SPATA31A5Q5VU36 1347 aa16.55■□□□□ 0.24
CSMD2-207ENST00000465819 SPATA31A7Q8IWB4 1347 aa16.55■□□□□ 0.24
CSMD2-207ENST00000465819 FAM182BQ5T319 152 aa16.54■□□□□ 0.24
CSMD2-207ENST00000465819 EIF3AQ14152 1382 aaKnown RBP16.53■□□□□ 0.24
CSMD2-207ENST00000465819 ACIN1Q9UKV3 1341 aaKnown RBP16.53■□□□□ 0.24
CSMD2-207ENST00000465819 R3HDM1Q15032 1099 aaKnown RBP16.53■□□□□ 0.24
CSMD2-207ENST00000465819 ADGRB1O14514 1584 aa16.52■□□□□ 0.24
CSMD2-207ENST00000465819 TULP4Q9NRJ4 1543 aa16.52■□□□□ 0.24
CSMD2-207ENST00000465819 PRR36Q9H6K5 1346 aa16.51■□□□□ 0.23
CSMD2-207ENST00000465819 HIRIP3Q9BW71 556 aaPredicted RBP16.51■□□□□ 0.23
CSMD2-207ENST00000465819 EZH2Q15910 746 aaKnown RBP16.5■□□□□ 0.23
CSMD2-207ENST00000465819 PRDM11Q9NQV5 511 aa16.5■□□□□ 0.23
CSMD2-207ENST00000465819 MINK1Q8N4C8 1332 aaPredicted RBP16.49■□□□□ 0.23
CSMD2-207ENST00000465819 TRAK1Q9UPV9 953 aa16.49■□□□□ 0.23
CSMD2-207ENST00000465819 NGDNQ8NEJ9 315 aaKnown RBP16.48■□□□□ 0.23
CSMD2-207ENST00000465819 PHRF1Q9P1Y6 1649 aaKnown RBP16.48■□□□□ 0.23
CSMD2-207ENST00000465819 ITSN1Q15811 1721 aa16.48■□□□□ 0.23
CSMD2-207ENST00000465819 SPATA31A1Q5TZJ5 1347 aa16.47■□□□□ 0.23
CSMD2-207ENST00000465819 WASLO00401 505 aaPredicted RBP16.47■□□□□ 0.23
CSMD2-207ENST00000465819 PAK3O75914 559 aaPredicted RBP16.47■□□□□ 0.23
CSMD2-207ENST00000465819 TRIM37O94972 964 aa16.46■□□□□ 0.23
CSMD2-207ENST00000465819 FAM196AQ6ZSG2 479 aa16.46■□□□□ 0.23
CSMD2-207ENST00000465819 CAMKK2Q96RR4 588 aa16.46■□□□□ 0.23
CSMD2-207ENST00000465819 KIAA0232Q92628 1395 aa16.46■□□□□ 0.23
CSMD2-207ENST00000465819 PARD3Q8TEW0 1356 aa16.45■□□□□ 0.22
CSMD2-207ENST00000465819 RREB1Q92766 1687 aa16.45■□□□□ 0.22
CSMD2-207ENST00000465819 STRN4Q9NRL3 753 aa16.44■□□□□ 0.22
CSMD2-207ENST00000465819 ATP7BP35670 1465 aa16.43■□□□□ 0.22
CSMD2-207ENST00000465819 NUP188Q5SRE5 1749 aa16.43■□□□□ 0.22
CSMD2-207ENST00000465819 APBA3O96018 575 aa16.43■□□□□ 0.22
CSMD2-207ENST00000465819 CHRNA2Q15822 529 aa16.43■□□□□ 0.22
CSMD2-207ENST00000465819 ARHGEF28Q8N1W1 1705 aaKnown RBP16.42■□□□□ 0.22
CSMD2-207ENST00000465819 ZC3H6P61129 1189 aaKnown RBP16.4■□□□□ 0.22
CSMD2-207ENST00000465819 USP35Q9P2H5 1018 aa16.4■□□□□ 0.22
CSMD2-207ENST00000465819 SSH2Q76I76 1423 aa16.39■□□□□ 0.21
CSMD2-207ENST00000465819 PDE3BQ13370 1112 aa16.39■□□□□ 0.21
CSMD2-207ENST00000465819 BARGINQ6ZT62 677 aa16.39■□□□□ 0.21
CSMD2-207ENST00000465819 NUDT16Q96DE0 195 aaKnown RBP16.39■□□□□ 0.21
CSMD2-207ENST00000465819 KDM2AQ9Y2K7 1162 aa16.39■□□□□ 0.21
CSMD2-207ENST00000465819 NRKQ7Z2Y5 1582 aa16.38■□□□□ 0.21
CSMD2-207ENST00000465819 TOPAZ1Q8N9V7 1692 aa16.38■□□□□ 0.21
CSMD2-207ENST00000465819 EVA1CP58658 441 aa16.38■□□□□ 0.21
CSMD2-207ENST00000465819 NUTM2GQ5VZR2 741 aa16.38■□□□□ 0.21
CSMD2-207ENST00000465819 RAB3GAP2Q9H2M9 1393 aa16.38■□□□□ 0.21
CSMD2-207ENST00000465819 NBPF8Q3BBV2 869 aa16.37■□□□□ 0.21
CSMD2-207ENST00000465819 NBPF14Q5TI25 921 aa16.37■□□□□ 0.21
CSMD2-207ENST00000465819 DCAF11Q8TEB1 546 aa16.37■□□□□ 0.21
CSMD2-207ENST00000465819 LMO7Q8WWI1 1683 aa16.37■□□□□ 0.21
CSMD2-207ENST00000465819 CAMTA1Q9Y6Y1 1673 aa16.37■□□□□ 0.21
CSMD2-207ENST00000465819 YY1P25490 414 aa16.36■□□□□ 0.21
CSMD2-207ENST00000465819 POLR3AO14802 1390 aaPredicted RBP16.36■□□□□ 0.21
CSMD2-207ENST00000465819 TCP11L2Q8N4U5 519 aa16.35■□□□□ 0.21
CSMD2-207ENST00000465819 PARP4Q9UKK3 1724 aaKnown RBP16.34■□□□□ 0.21
CSMD2-207ENST00000465819 LARP1Q6PKG0 1096 aaKnown RBP16.34■□□□□ 0.21
CSMD2-207ENST00000465819 STAC3Q96MF2 364 aa16.34■□□□□ 0.21
CSMD2-207ENST00000465819 CDK19Q9BWU1 502 aa16.33■□□□□ 0.2
CSMD2-207ENST00000465819 ACEP12821 1306 aa16.33■□□□□ 0.2
CSMD2-207ENST00000465819 CPDO75976 1380 aa16.33■□□□□ 0.2
CSMD2-207ENST00000465819 SPON1Q9HCB6 807 aa16.32■□□□□ 0.2
CSMD2-207ENST00000465819 PPP1R1BQ9UD71 204 aaPredicted RBP16.32■□□□□ 0.2
CSMD2-207ENST00000465819 USP19O94966 1318 aa16.31■□□□□ 0.2
CSMD2-207ENST00000465819 ABTB2Q8N961 1025 aa16.31■□□□□ 0.2
CSMD2-207ENST00000465819 THRAP3Q9Y2W1 955 aaKnown RBP16.31■□□□□ 0.2
CSMD2-207ENST00000465819 CCDC61Q9Y6R9 512 aa16.31■□□□□ 0.2
CSMD2-207ENST00000465819 RGPD3A6NKT7 1758 aaPredicted RBP16.31■□□□□ 0.2
CSMD2-207ENST00000465819 RGPD4Q7Z3J3 1758 aa16.31■□□□□ 0.2
CSMD2-207ENST00000465819 NINLQ9Y2I6 1382 aa16.3■□□□□ 0.2
CSMD2-207ENST00000465819 KCNQ2O43526 872 aa16.3■□□□□ 0.2
CSMD2-207ENST00000465819 COL5A2P05997 1499 aaPredicted RBP16.29■□□□□ 0.2
CSMD2-207ENST00000465819 PEAK1Q9H792 1746 aa16.29■□□□□ 0.2
CSMD2-207ENST00000465819 PLEKHG3A1L390 1219 aa16.29■□□□□ 0.2
CSMD2-207ENST00000465819 C11orf95C9JLR9 678 aaPredicted RBP16.29■□□□□ 0.2
CSMD2-207ENST00000465819 SBF2Q86WG5 1849 aa16.29■□□□□ 0.2
CSMD2-207ENST00000465819 DCAF8L1A6NGE4 600 aa16.28■□□□□ 0.2
CSMD2-207ENST00000465819 OVOS2A0A0G2JMS6 1433 aa16.28■□□□□ 0.2
CSMD2-207ENST00000465819 OVOS2A0A0J9YW53 1432 aa16.28■□□□□ 0.2
CSMD2-207ENST00000465819 OVOS2Q6IE36 1432 aa16.28■□□□□ 0.2
CSMD2-207ENST00000465819 LRRC37A3O60309 1634 aa16.27■□□□□ 0.2
CSMD2-207ENST00000465819 NLRP13Q86W25 1043 aa16.27■□□□□ 0.2
CSMD2-207ENST00000465819 CRB1P82279 1406 aa16.27■□□□□ 0.19
CSMD2-207ENST00000465819 CASZ1Q86V15 1759 aa16.26■□□□□ 0.19
CSMD2-207ENST00000465819 KIAA1210Q9ULL0 1709 aa16.26■□□□□ 0.19
CSMD2-207ENST00000465819 GCP02774 474 aa16.26■□□□□ 0.19
CSMD2-207ENST00000465819 WNK3Q9BYP7 1800 aa16.24■□□□□ 0.19
CSMD2-207ENST00000465819 PPIP5K1Q6PFW1 1433 aa16.24■□□□□ 0.19
CSMD2-207ENST00000465819 PLSCR1O15162 318 aa16.23■□□□□ 0.19
CSMD2-207ENST00000465819 ZBTB7CA1YPR0 619 aa16.22■□□□□ 0.19
CSMD2-207ENST00000465819 ANO8Q9HCE9 1232 aaPredicted RBP16.22■□□□□ 0.19
CSMD2-207ENST00000465819 SLIT3O75094 1523 aa16.22■□□□□ 0.19
CSMD2-207ENST00000465819 BRD4O60885 1362 aaPredicted RBP16.22■□□□□ 0.19
CSMD2-207ENST00000465819 AKAP12Q02952 1782 aa16.21■□□□□ 0.19
CSMD2-207ENST00000465819 SRPK2P78362 688 aaKnown RBP16.21■□□□□ 0.19
CSMD2-207ENST00000465819 DDB1Q16531 1140 aa16.21■□□□□ 0.19
CSMD2-207ENST00000465819 AATKQ6ZMQ8 1374 aa16.21■□□□□ 0.19
CSMD2-207ENST00000465819 MYOM1P52179 1685 aa16.2■□□□□ 0.18
CSMD2-207ENST00000465819 COL18A1P39060 1754 aa16.2■□□□□ 0.18
CSMD2-207ENST00000465819 TOM1L2Q6ZVM7 507 aa16.19■□□□□ 0.18
CSMD2-207ENST00000465819 BCL11BQ9C0K0 894 aaPredicted RBP16.19■□□□□ 0.18
CSMD2-207ENST00000465819 USP6P35125 1406 aa16.19■□□□□ 0.18
CSMD2-207ENST00000465819 QRICH2Q9H0J4 1663 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms