RNA–Protein interactions for RNA: ENST00000462710.5

SRRM1-205, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 2,624 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-205ENST00000462710 STK26Q9P289 416 aa13.49□□□□□ -0.25
SRRM1-205ENST00000462710 HAP1P54257 671 aaPredicted RBP13.48□□□□□ -0.25
SRRM1-205ENST00000462710 FAM196AQ6ZSG2 479 aa13.48□□□□□ -0.25
SRRM1-205ENST00000462710 CAMKK2Q96RR4 588 aa13.48□□□□□ -0.25
SRRM1-205ENST00000462710 CPDO75976 1380 aa13.48□□□□□ -0.25
SRRM1-205ENST00000462710 SPATA31A1Q5TZJ5 1347 aa13.47□□□□□ -0.25
SRRM1-205ENST00000462710 NRKQ7Z2Y5 1582 aa13.47□□□□□ -0.25
SRRM1-205ENST00000462710 TMEM132EQ6IEE7 984 aa13.47□□□□□ -0.25
SRRM1-205ENST00000462710 POLR3AO14802 1390 aaPredicted RBP13.47□□□□□ -0.25
SRRM1-205ENST00000462710 PEAK1Q9H792 1746 aa13.47□□□□□ -0.25
SRRM1-205ENST00000462710 BCL9O00512 1426 aa13.46□□□□□ -0.25
SRRM1-205ENST00000462710 NINLQ9Y2I6 1382 aa13.46□□□□□ -0.25
SRRM1-205ENST00000462710 PRAM1Q96QH2 718 aa13.45□□□□□ -0.26
SRRM1-205ENST00000462710 THRAP3Q9Y2W1 955 aaKnown RBP13.45□□□□□ -0.26
SRRM1-205ENST00000462710 WNK3Q9BYP7 1800 aa13.45□□□□□ -0.26
SRRM1-205ENST00000462710 BTG4Q9NY30 223 aa13.44□□□□□ -0.26
SRRM1-205ENST00000462710 WASLO00401 505 aaPredicted RBP13.44□□□□□ -0.26
SRRM1-205ENST00000462710 CASZ1Q86V15 1759 aa13.44□□□□□ -0.26
SRRM1-205ENST00000462710 FAM98CQ17RN3 349 aaKnown RBP13.43□□□□□ -0.26
SRRM1-205ENST00000462710 CFAP70Q5T0N1 1121 aa13.43□□□□□ -0.26
SRRM1-205ENST00000462710 SSH2Q76I76 1423 aa13.43□□□□□ -0.26
SRRM1-205ENST00000462710 PRR36Q9H6K5 1346 aa13.43□□□□□ -0.26
SRRM1-205ENST00000462710 CABLES1Q8TDN4 633 aa13.43□□□□□ -0.26
SRRM1-205ENST00000462710 CCDC9Q9Y3X0 531 aaKnown RBP13.43□□□□□ -0.26
SRRM1-205ENST00000462710 USP19O94966 1318 aa13.42□□□□□ -0.26
SRRM1-205ENST00000462710 ABCC6O95255 1503 aa13.42□□□□□ -0.26
SRRM1-205ENST00000462710 RGL3Q3MIN7 710 aa13.41□□□□□ -0.26
SRRM1-205ENST00000462710 POGKQ9P215 609 aa13.41□□□□□ -0.26
SRRM1-205ENST00000462710 NUTM2FA1L443 756 aa13.41□□□□□ -0.26
SRRM1-205ENST00000462710 EN1Q05925 392 aaPredicted RBP13.41□□□□□ -0.26
SRRM1-205ENST00000462710 SBF2Q86WG5 1849 aa13.4□□□□□ -0.26
SRRM1-205ENST00000462710 SLIT3O75094 1523 aa13.4□□□□□ -0.26
SRRM1-205ENST00000462710 PLEKHG3A1L390 1219 aa13.4□□□□□ -0.26
SRRM1-205ENST00000462710 NBPF8Q3BBV2 869 aa13.39□□□□□ -0.27
SRRM1-205ENST00000462710 NBPF14Q5TI25 921 aa13.39□□□□□ -0.27
SRRM1-205ENST00000462710 PSDA5PKW4 1024 aaPredicted RBP13.38□□□□□ -0.27
SRRM1-205ENST00000462710 KIAA0232Q92628 1395 aa13.37□□□□□ -0.27
SRRM1-205ENST00000462710 R3HDM1Q15032 1099 aaKnown RBP13.37□□□□□ -0.27
SRRM1-205ENST00000462710 EZH2Q15910 746 aaKnown RBP13.37□□□□□ -0.27
SRRM1-205ENST00000462710 PRDM11Q9NQV5 511 aa13.37□□□□□ -0.27
SRRM1-205ENST00000462710 CAMTA1Q9Y6Y1 1673 aa13.37□□□□□ -0.27
SRRM1-205ENST00000462710 AATKQ6ZMQ8 1374 aa13.37□□□□□ -0.27
SRRM1-205ENST00000462710 COL18A1P39060 1754 aa13.37□□□□□ -0.27
SRRM1-205ENST00000462710 LRRC37A3O60309 1634 aa13.37□□□□□ -0.27
SRRM1-205ENST00000462710 PMFBP1Q8TBY8 1022 aa13.36□□□□□ -0.27
SRRM1-205ENST00000462710 USP54Q70EL1 1684 aa13.36□□□□□ -0.27
SRRM1-205ENST00000462710 PLSCR1O15162 318 aa13.36□□□□□ -0.27
SRRM1-205ENST00000462710 COL24A1Q17RW2 1714 aa13.35□□□□□ -0.27
SRRM1-205ENST00000462710 TCP11L2Q8N4U5 519 aa13.34□□□□□ -0.27
SRRM1-205ENST00000462710 NGDNQ8NEJ9 315 aaKnown RBP13.34□□□□□ -0.27
SRRM1-205ENST00000462710 OVOS2A0A0G2JMS6 1433 aa13.34□□□□□ -0.27
SRRM1-205ENST00000462710 OVOS2A0A0J9YW53 1432 aa13.34□□□□□ -0.27
SRRM1-205ENST00000462710 OVOS2Q6IE36 1432 aa13.34□□□□□ -0.27
SRRM1-205ENST00000462710 COL5A2P05997 1499 aaPredicted RBP13.34□□□□□ -0.27
SRRM1-205ENST00000462710 NUDT16Q96DE0 195 aaKnown RBP13.34□□□□□ -0.27
SRRM1-205ENST00000462710 QSER1Q2KHR3 1735 aa13.34□□□□□ -0.27
SRRM1-205ENST00000462710 QRICH2Q9H0J4 1663 aa13.34□□□□□ -0.27
SRRM1-205ENST00000462710 CRB1P82279 1406 aa13.33□□□□□ -0.28
SRRM1-205ENST00000462710 KCNQ2O43526 872 aa13.33□□□□□ -0.28
SRRM1-205ENST00000462710 CDCA7Q9BWT1 371 aaPredicted RBP13.33□□□□□ -0.28
SRRM1-205ENST00000462710 TRPM1Q7Z4N2 1603 aa13.33□□□□□ -0.28
SRRM1-205ENST00000462710 APBA3O96018 575 aa13.33□□□□□ -0.28
SRRM1-205ENST00000462710 LMOD2Q6P5Q4 547 aa13.33□□□□□ -0.28
SRRM1-205ENST00000462710 SPON1Q9HCB6 807 aa13.33□□□□□ -0.28
SRRM1-205ENST00000462710 AKAP12Q02952 1782 aa13.32□□□□□ -0.28
SRRM1-205ENST00000462710 MAP3K5Q99683 1374 aa13.31□□□□□ -0.28
SRRM1-205ENST00000462710 A0A0G2JS52 829 aa13.31□□□□□ -0.28
SRRM1-205ENST00000462710 DCAF8L1A6NGE4 600 aa13.31□□□□□ -0.28
SRRM1-205ENST00000462710 MYT1Q01538 1121 aa13.31□□□□□ -0.28
SRRM1-205ENST00000462710 TRIM37O94972 964 aa13.31□□□□□ -0.28
SRRM1-205ENST00000462710 CCDC61Q9Y6R9 512 aa13.31□□□□□ -0.28
SRRM1-205ENST00000462710 PDE3BQ13370 1112 aa13.3□□□□□ -0.28
SRRM1-205ENST00000462710 MINK1Q8N4C8 1332 aaPredicted RBP13.3□□□□□ -0.28
SRRM1-205ENST00000462710 YY1P25490 414 aa13.29□□□□□ -0.28
SRRM1-205ENST00000462710 TRAK1Q9UPV9 953 aa13.29□□□□□ -0.28
SRRM1-205ENST00000462710 NLRP13Q86W25 1043 aa13.29□□□□□ -0.28
SRRM1-205ENST00000462710 NHSQ6T4R5 1651 aa13.28□□□□□ -0.28
SRRM1-205ENST00000462710 PAPPAQ13219 1627 aa13.28□□□□□ -0.28
SRRM1-205ENST00000462710 ACEP12821 1306 aa13.27□□□□□ -0.28
SRRM1-205ENST00000462710 CDK19Q9BWU1 502 aa13.27□□□□□ -0.29
SRRM1-205ENST00000462710 BCL11BQ9C0K0 894 aaPredicted RBP13.27□□□□□ -0.29
SRRM1-205ENST00000462710 EVA1CP58658 441 aa13.26□□□□□ -0.29
SRRM1-205ENST00000462710 RAB3GAP2Q9H2M9 1393 aa13.26□□□□□ -0.29
SRRM1-205ENST00000462710 MYOM1P52179 1685 aa13.26□□□□□ -0.29
SRRM1-205ENST00000462710 SAFB2Q14151 953 aaKnown RBP eCLIP13.26□□□□□ -0.29
SRRM1-205ENST00000462710 PIK3C2AO00443 1686 aa13.25□□□□□ -0.29
SRRM1-205ENST00000462710 CHD4Q14839 1912 aa13.25□□□□□ -0.29
SRRM1-205ENST00000462710 USP6P35125 1406 aa13.25□□□□□ -0.29
SRRM1-205ENST00000462710 PAK3O75914 559 aaPredicted RBP13.25□□□□□ -0.29
SRRM1-205ENST00000462710 PPARGC1BQ86YN6 1023 aaKnown RBP13.25□□□□□ -0.29
SRRM1-205ENST00000462710 LARP1Q6PKG0 1096 aaKnown RBP13.24□□□□□ -0.29
SRRM1-205ENST00000462710 GCP02774 474 aa13.23□□□□□ -0.29
SRRM1-205ENST00000462710 PPIP5K1Q6PFW1 1433 aa13.23□□□□□ -0.29
SRRM1-205ENST00000462710 CCDC7Q96M83 1385 aa13.23□□□□□ -0.29
SRRM1-205ENST00000462710 CHRNA2Q15822 529 aa13.23□□□□□ -0.29
SRRM1-205ENST00000462710 HIRIP3Q9BW71 556 aaPredicted RBP13.23□□□□□ -0.29
SRRM1-205ENST00000462710 STRN4Q9NRL3 753 aa13.23□□□□□ -0.29
SRRM1-205ENST00000462710 CPSF1Q10570 1443 aaKnown RBP13.22□□□□□ -0.29
SRRM1-205ENST00000462710 FAM182BQ5T319 152 aa13.22□□□□□ -0.29
SRRM1-205ENST00000462710 DCAF11Q8TEB1 546 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms