RNA–Protein interactions for RNA: ENST00000462542.5

PCCB-203, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-203ENST00000462542 EZH2Q15910 746 aaKnown RBP17.31■□□□□ 0.36
PCCB-203ENST00000462542 CAMKK2Q96RR4 588 aa17.31■□□□□ 0.36
PCCB-203ENST00000462542 PRDM11Q9NQV5 511 aa17.3■□□□□ 0.36
PCCB-203ENST00000462542 DLC1Q96QB1 1528 aa17.3■□□□□ 0.36
PCCB-203ENST00000462542 PARD3Q8TEW0 1356 aa17.29■□□□□ 0.36
PCCB-203ENST00000462542 NGDNQ8NEJ9 315 aaKnown RBP17.29■□□□□ 0.36
PCCB-203ENST00000462542 TRPM3Q9HCF6 1732 aaPredicted RBP17.28■□□□□ 0.36
PCCB-203ENST00000462542 PAK3O75914 559 aaPredicted RBP17.28■□□□□ 0.36
PCCB-203ENST00000462542 TRIM37O94972 964 aa17.28■□□□□ 0.36
PCCB-203ENST00000462542 SPATA31A1Q5TZJ5 1347 aa17.27■□□□□ 0.36
PCCB-203ENST00000462542 ALS2Q96Q42 1657 aa17.27■□□□□ 0.36
PCCB-203ENST00000462542 WASLO00401 505 aaPredicted RBP17.27■□□□□ 0.36
PCCB-203ENST00000462542 APBA3O96018 575 aa17.27■□□□□ 0.36
PCCB-203ENST00000462542 NBPF8Q3BBV2 869 aa17.26■□□□□ 0.35
PCCB-203ENST00000462542 NBPF14Q5TI25 921 aa17.26■□□□□ 0.35
PCCB-203ENST00000462542 HIRIP3Q9BW71 556 aaPredicted RBP17.26■□□□□ 0.35
PCCB-203ENST00000462542 TRAK1Q9UPV9 953 aa17.26■□□□□ 0.35
PCCB-203ENST00000462542 ADGRB2O60241 1585 aa17.25■□□□□ 0.35
PCCB-203ENST00000462542 THSD7AQ9UPZ6 1657 aa17.25■□□□□ 0.35
PCCB-203ENST00000462542 PRR36Q9H6K5 1346 aa17.24■□□□□ 0.35
PCCB-203ENST00000462542 YY1P25490 414 aa17.24■□□□□ 0.35
PCCB-203ENST00000462542 PDE3BQ13370 1112 aa17.24■□□□□ 0.35
PCCB-203ENST00000462542 TNS1Q9HBL0 1735 aaKnown RBP17.24■□□□□ 0.35
PCCB-203ENST00000462542 MINK1Q8N4C8 1332 aaPredicted RBP17.23■□□□□ 0.35
PCCB-203ENST00000462542 DCAF8L1A6NGE4 600 aa17.23■□□□□ 0.35
PCCB-203ENST00000462542 EVA1CP58658 441 aa17.23■□□□□ 0.35
PCCB-203ENST00000462542 BARGINQ6ZT62 677 aa17.23■□□□□ 0.35
PCCB-203ENST00000462542 STAC3Q96MF2 364 aa17.22■□□□□ 0.35
PCCB-203ENST00000462542 STRN4Q9NRL3 753 aa17.22■□□□□ 0.35
PCCB-203ENST00000462542 KIAA0232Q92628 1395 aa17.22■□□□□ 0.35
PCCB-203ENST00000462542 TULP4Q9NRJ4 1543 aa17.21■□□□□ 0.35
PCCB-203ENST00000462542 C11orf95C9JLR9 678 aaPredicted RBP17.2■□□□□ 0.34
PCCB-203ENST00000462542 CHRNA2Q15822 529 aa17.2■□□□□ 0.34
PCCB-203ENST00000462542 ZC3H6P61129 1189 aaKnown RBP17.19■□□□□ 0.34
PCCB-203ENST00000462542 NUDT16Q96DE0 195 aaKnown RBP17.19■□□□□ 0.34
PCCB-203ENST00000462542 SPON1Q9HCB6 807 aa17.19■□□□□ 0.34
PCCB-203ENST00000462542 ADGRB1O14514 1584 aa17.19■□□□□ 0.34
PCCB-203ENST00000462542 USP35Q9P2H5 1018 aa17.18■□□□□ 0.34
PCCB-203ENST00000462542 PPP1R1BQ9UD71 204 aaPredicted RBP17.18■□□□□ 0.34
PCCB-203ENST00000462542 CRYBG1Q9Y4K1 1723 aa17.18■□□□□ 0.34
PCCB-203ENST00000462542 THRAP3Q9Y2W1 955 aaKnown RBP17.17■□□□□ 0.34
PCCB-203ENST00000462542 KCNQ2O43526 872 aa17.16■□□□□ 0.34
PCCB-203ENST00000462542 TCP11L2Q8N4U5 519 aa17.16■□□□□ 0.34
PCCB-203ENST00000462542 KDM2AQ9Y2K7 1162 aa17.16■□□□□ 0.34
PCCB-203ENST00000462542 ATP7BP35670 1465 aa17.14■□□□□ 0.33
PCCB-203ENST00000462542 DCAF11Q8TEB1 546 aa17.14■□□□□ 0.33
PCCB-203ENST00000462542 SSH2Q76I76 1423 aa17.13■□□□□ 0.33
PCCB-203ENST00000462542 NUTM2GQ5VZR2 741 aa17.13■□□□□ 0.33
PCCB-203ENST00000462542 CCDC61Q9Y6R9 512 aa17.13■□□□□ 0.33
PCCB-203ENST00000462542 PLEKHG3A1L390 1219 aa17.12■□□□□ 0.33
PCCB-203ENST00000462542 LARP1Q6PKG0 1096 aaKnown RBP17.12■□□□□ 0.33
PCCB-203ENST00000462542 ABTB2Q8N961 1025 aa17.12■□□□□ 0.33
PCCB-203ENST00000462542 CDK19Q9BWU1 502 aa17.12■□□□□ 0.33
PCCB-203ENST00000462542 RREB1Q92766 1687 aa17.12■□□□□ 0.33
PCCB-203ENST00000462542 ITSN1Q15811 1721 aa17.12■□□□□ 0.33
PCCB-203ENST00000462542 CPDO75976 1380 aa17.12■□□□□ 0.33
PCCB-203ENST00000462542 NINLQ9Y2I6 1382 aa17.12■□□□□ 0.33
PCCB-203ENST00000462542 PLSCR1O15162 318 aa17.11■□□□□ 0.33
PCCB-203ENST00000462542 ACEP12821 1306 aa17.11■□□□□ 0.33
PCCB-203ENST00000462542 POLR3AO14802 1390 aaPredicted RBP17.11■□□□□ 0.33
PCCB-203ENST00000462542 NLRP13Q86W25 1043 aa17.1■□□□□ 0.33
PCCB-203ENST00000462542 PHRF1Q9P1Y6 1649 aaKnown RBP17.1■□□□□ 0.33
PCCB-203ENST00000462542 NUP188Q5SRE5 1749 aa17.1■□□□□ 0.33
PCCB-203ENST00000462542 CAMTA1Q9Y6Y1 1673 aa17.09■□□□□ 0.33
PCCB-203ENST00000462542 GCP02774 474 aa17.07■□□□□ 0.32
PCCB-203ENST00000462542 USP19O94966 1318 aa17.06■□□□□ 0.32
PCCB-203ENST00000462542 BRD4O60885 1362 aaPredicted RBP17.04■□□□□ 0.32
PCCB-203ENST00000462542 BCL11BQ9C0K0 894 aaPredicted RBP17.04■□□□□ 0.32
PCCB-203ENST00000462542 OVOS2A0A0G2JMS6 1433 aa17.04■□□□□ 0.32
PCCB-203ENST00000462542 OVOS2A0A0J9YW53 1432 aa17.04■□□□□ 0.32
PCCB-203ENST00000462542 OVOS2Q6IE36 1432 aa17.04■□□□□ 0.32
PCCB-203ENST00000462542 DDB1Q16531 1140 aa17.03■□□□□ 0.32
PCCB-203ENST00000462542 PARP4Q9UKK3 1724 aaKnown RBP17.03■□□□□ 0.32
PCCB-203ENST00000462542 LMO7Q8WWI1 1683 aa17.03■□□□□ 0.32
PCCB-203ENST00000462542 CRB1P82279 1406 aa17.03■□□□□ 0.32
PCCB-203ENST00000462542 ARHGEF28Q8N1W1 1705 aaKnown RBP17.02■□□□□ 0.32
PCCB-203ENST00000462542 NRKQ7Z2Y5 1582 aa17.02■□□□□ 0.31
PCCB-203ENST00000462542 COL5A2P05997 1499 aaPredicted RBP17.01■□□□□ 0.31
PCCB-203ENST00000462542 CDCA7Q9BWT1 371 aaPredicted RBP17.01■□□□□ 0.31
PCCB-203ENST00000462542 RAB3GAP2Q9H2M9 1393 aa17.01■□□□□ 0.31
PCCB-203ENST00000462542 AATKQ6ZMQ8 1374 aa17■□□□□ 0.31
PCCB-203ENST00000462542 RGPD3A6NKT7 1758 aaPredicted RBP17■□□□□ 0.31
PCCB-203ENST00000462542 RGPD4Q7Z3J3 1758 aa17■□□□□ 0.31
PCCB-203ENST00000462542 TOPAZ1Q8N9V7 1692 aa16.98■□□□□ 0.31
PCCB-203ENST00000462542 NLRP6P59044 892 aa16.98■□□□□ 0.31
PCCB-203ENST00000462542 SRPK2P78362 688 aaKnown RBP16.98■□□□□ 0.31
PCCB-203ENST00000462542 TOM1L2Q6ZVM7 507 aa16.98■□□□□ 0.31
PCCB-203ENST00000462542 PROM2Q8N271 834 aa16.98■□□□□ 0.31
PCCB-203ENST00000462542 PEAK1Q9H792 1746 aa16.97■□□□□ 0.31
PCCB-203ENST00000462542 ANO8Q9HCE9 1232 aaPredicted RBP16.97■□□□□ 0.31
PCCB-203ENST00000462542 BCL9O00512 1426 aa16.96■□□□□ 0.31
PCCB-203ENST00000462542 SBF2Q86WG5 1849 aa16.96■□□□□ 0.31
PCCB-203ENST00000462542 ZBTB7AO95365 584 aa16.96■□□□□ 0.31
PCCB-203ENST00000462542 PTGER2P43116 358 aa16.96■□□□□ 0.31
PCCB-203ENST00000462542 ZNF784Q8NCA9 323 aaPredicted RBP16.96■□□□□ 0.31
PCCB-203ENST00000462542 STK32BQ9NY57 414 aa16.96■□□□□ 0.31
PCCB-203ENST00000462542 PPIP5K1Q6PFW1 1433 aa16.96■□□□□ 0.3
PCCB-203ENST00000462542 ZBTB7CA1YPR0 619 aa16.95■□□□□ 0.3
PCCB-203ENST00000462542 MARCH10Q8NA82 808 aaPredicted RBP16.95■□□□□ 0.3
PCCB-203ENST00000462542 PDGFDQ9GZP0 370 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms