RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 SOGA1O94964 1423 aa8.92□□□□□ -0.98
COPS3-204ENST00000462236 TDRD9Q8NDG6 1382 aaKnown RBP8.92□□□□□ -0.98
COPS3-204ENST00000462236 CFAP99D6REC4 459 aa8.92□□□□□ -0.98
COPS3-204ENST00000462236 USP17L8P0C7I0 530 aa8.92□□□□□ -0.98
COPS3-204ENST00000462236 MSS51Q4VC12 460 aa8.92□□□□□ -0.98
COPS3-204ENST00000462236 HCSTQ9UBK5 93 aa8.92□□□□□ -0.98
COPS3-204ENST00000462236 GRIN2BQ13224 1484 aa8.91□□□□□ -0.98
COPS3-204ENST00000462236 RAD21O60216 631 aa8.91□□□□□ -0.98
COPS3-204ENST00000462236 PTPN5P54829 565 aa8.91□□□□□ -0.98
COPS3-204ENST00000462236 SPNS2Q8IVW8 549 aa8.91□□□□□ -0.98
COPS3-204ENST00000462236 IL21Q9HBE4 155 aa8.91□□□□□ -0.98
COPS3-204ENST00000462236 SNRKQ9NRH2 765 aa8.91□□□□□ -0.98
COPS3-204ENST00000462236 FGD5Q6ZNL6 1462 aa8.9□□□□□ -0.98
COPS3-204ENST00000462236 ZPR1O75312 459 aa8.9□□□□□ -0.98
COPS3-204ENST00000462236 RNF19BQ6ZMZ0 732 aa8.9□□□□□ -0.98
COPS3-204ENST00000462236 MTMR14Q8NCE2 650 aa8.9□□□□□ -0.98
COPS3-204ENST00000462236 SYMPKQ92797 1274 aaKnown RBP8.9□□□□□ -0.98
COPS3-204ENST00000462236 RNF166Q96A37 237 aaPredicted RBP8.9□□□□□ -0.98
COPS3-204ENST00000462236 ERCC6L2Q5T890 1561 aa8.9□□□□□ -0.99
COPS3-204ENST00000462236 CTDSPL2Q05D32 466 aa8.89□□□□□ -0.99
COPS3-204ENST00000462236 TJAP1Q5JTD0 557 aa8.89□□□□□ -0.99
COPS3-204ENST00000462236 LYPD8Q6UX82 237 aa8.89□□□□□ -0.99
COPS3-204ENST00000462236 SPSB2Q99619 263 aa8.89□□□□□ -0.99
COPS3-204ENST00000462236 MTRQ99707 1265 aa8.89□□□□□ -0.99
COPS3-204ENST00000462236 SHROOM2Q13796 1616 aa8.89□□□□□ -0.99
COPS3-204ENST00000462236 ABCA5Q8WWZ7 1642 aa8.89□□□□□ -0.99
COPS3-204ENST00000462236 CUX1P39880 1505 aa8.89□□□□□ -0.99
COPS3-204ENST00000462236 COPS2P61201 443 aa8.88□□□□□ -0.99
COPS3-204ENST00000462236 ADH1BP00325 375 aa8.87□□□□□ -0.99
COPS3-204ENST00000462236 JUNDP17535 347 aa8.87□□□□□ -0.99
COPS3-204ENST00000462236 MMP16P51512 607 aa8.86□□□□□ -0.99
COPS3-204ENST00000462236 PTPRNQ16849 979 aa8.86□□□□□ -0.99
COPS3-204ENST00000462236 WWC1Q8IX03 1113 aa8.86□□□□□ -0.99
COPS3-204ENST00000462236 CHMP7Q8WUX9 453 aaPredicted RBP8.86□□□□□ -0.99
COPS3-204ENST00000462236 TSC1Q92574 1164 aa8.86□□□□□ -0.99
COPS3-204ENST00000462236 DXOO77932 396 aaKnown RBP8.85□□□□□ -0.99
COPS3-204ENST00000462236 FAM160A2Q8N612 972 aaPredicted RBP8.85□□□□□ -0.99
COPS3-204ENST00000462236 PNMA1Q8ND90 353 aa8.85□□□□□ -0.99
COPS3-204ENST00000462236 GJD4Q96KN9 370 aaPredicted RBP8.85□□□□□ -0.99
COPS3-204ENST00000462236 COG6Q9Y2V7 657 aa8.85□□□□□ -0.99
COPS3-204ENST00000462236 NDUFB9Q9Y6M9 179 aa8.85□□□□□ -0.99
COPS3-204ENST00000462236 CEP170Q5SW79 1584 aa8.85□□□□□ -0.99
COPS3-204ENST00000462236 ITGBL1O95965 494 aaPredicted RBP8.84□□□□□ -0.99
COPS3-204ENST00000462236 ABCA10Q8WWZ4 1543 aa8.84□□□□□ -0.99
COPS3-204ENST00000462236 PROSER2Q86WR7 435 aaPredicted RBP8.83□□□□□ -1
COPS3-204ENST00000462236 NUP160Q12769 1436 aa8.82□□□□□ -1
COPS3-204ENST00000462236 TRAK2O60296 914 aa8.82□□□□□ -1
COPS3-204ENST00000462236 FNBP4Q8N3X1 1017 aaPredicted RBP8.82□□□□□ -1
COPS3-204ENST00000462236 LRRN4Q8WUT4 740 aa8.82□□□□□ -1
COPS3-204ENST00000462236 CLUAP1Q96AJ1 413 aa8.82□□□□□ -1
COPS3-204ENST00000462236 TRIM34Q9BYJ4 488 aa8.82□□□□□ -1
COPS3-204ENST00000462236 PER1O15534 1290 aaPredicted RBP8.81□□□□□ -1
COPS3-204ENST00000462236 SLC6A16Q9GZN6 736 aa8.81□□□□□ -1
COPS3-204ENST00000462236 HMX1Q9NP08 348 aaPredicted RBP8.81□□□□□ -1
COPS3-204ENST00000462236 GRIN2AQ12879 1464 aa8.81□□□□□ -1
COPS3-204ENST00000462236 ADAMTS12P58397 1594 aa8.81□□□□□ -1
COPS3-204ENST00000462236 F12P00748 615 aaPredicted RBP8.8□□□□□ -1
COPS3-204ENST00000462236 CCNYL3P0C7X3 344 aa8.8□□□□□ -1
COPS3-204ENST00000462236 KCNC4Q03721 635 aa8.8□□□□□ -1
COPS3-204ENST00000462236 POM121Q96HA1 1249 aa8.8□□□□□ -1
COPS3-204ENST00000462236 GDPD2Q9HCC8 539 aa8.8□□□□□ -1
COPS3-204ENST00000462236 EVA1BQ9NVM1 165 aa8.8□□□□□ -1
COPS3-204ENST00000462236 ZC3H4Q9UPT8 1303 aaKnown RBP8.8□□□□□ -1
COPS3-204ENST00000462236 ARMC2Q8NEN0 867 aa8.79□□□□□ -1
COPS3-204ENST00000462236 ZNF516Q92618 1163 aa8.79□□□□□ -1
COPS3-204ENST00000462236 TLL1O43897 1013 aa8.78□□□□□ -1
COPS3-204ENST00000462236 WASHC4Q2M389 1173 aa8.78□□□□□ -1
COPS3-204ENST00000462236 NUDT12Q9BQG2 462 aa8.78□□□□□ -1
COPS3-204ENST00000462236 TBC1D2BQ9UPU7 963 aa8.78□□□□□ -1
COPS3-204ENST00000462236 KCNH2Q12809 1159 aa8.77□□□□□ -1.01
COPS3-204ENST00000462236 MMRN1Q13201 1228 aa8.77□□□□□ -1.01
COPS3-204ENST00000462236 NR6A1Q15406 480 aa8.77□□□□□ -1.01
COPS3-204ENST00000462236 GPKOWQ92917 476 aaPredicted RBP eCLIP8.77□□□□□ -1.01
COPS3-204ENST00000462236 DIP2BQ9P265 1576 aa8.77□□□□□ -1.01
COPS3-204ENST00000462236 ABCC10Q5T3U5 1492 aa8.77□□□□□ -1.01
COPS3-204ENST00000462236 ABL2P42684 1182 aa8.76□□□□□ -1.01
COPS3-204ENST00000462236 TSPOAP1O95153 1857 aa8.76□□□□□ -1.01
COPS3-204ENST00000462236 MAPKBP1O60336 1514 aa8.75□□□□□ -1.01
COPS3-204ENST00000462236 GGCXP38435 758 aa8.75□□□□□ -1.01
COPS3-204ENST00000462236 IFFO2Q5TF58 517 aa8.75□□□□□ -1.01
COPS3-204ENST00000462236 PRDM9Q9NQV7 894 aa8.75□□□□□ -1.01
COPS3-204ENST00000462236 FKBPLQ9UIM3 349 aa8.74□□□□□ -1.01
COPS3-204ENST00000462236 ZNF330Q9Y3S2 320 aaPredicted RBP8.74□□□□□ -1.01
COPS3-204ENST00000462236 GPSM3Q9Y4H4 160 aa8.74□□□□□ -1.01
COPS3-204ENST00000462236 BIVM-ERCC5R4GMW8 1640 aa8.73□□□□□ -1.01
COPS3-204ENST00000462236 GPR37L1O60883 481 aa8.73□□□□□ -1.01
COPS3-204ENST00000462236 CTHP32929 405 aa8.73□□□□□ -1.01
COPS3-204ENST00000462236 IRF5Q13568 498 aa8.73□□□□□ -1.01
COPS3-204ENST00000462236 NKX2-3Q8TAU0 364 aa8.73□□□□□ -1.01
COPS3-204ENST00000462236 EPS8L1Q8TE68 723 aa8.73□□□□□ -1.01
COPS3-204ENST00000462236 KDM6BO15054 1643 aa8.72□□□□□ -1.01
COPS3-204ENST00000462236 ADCY10Q96PN6 1610 aa8.72□□□□□ -1.01
COPS3-204ENST00000462236 ERICH3Q5RHP9 1530 aa8.72□□□□□ -1.01
COPS3-204ENST00000462236 SUPT5HO00267 1087 aaKnown RBP8.72□□□□□ -1.01
COPS3-204ENST00000462236 S1PR4O95977 384 aa8.72□□□□□ -1.01
COPS3-204ENST00000462236 NBPF14Q5TI25 921 aa8.72□□□□□ -1.01
COPS3-204ENST00000462236 MAP10Q9P2G4 905 aa8.72□□□□□ -1.01
COPS3-204ENST00000462236 SOX11P35716 441 aa8.71□□□□□ -1.02
COPS3-204ENST00000462236 ZNF592Q92610 1267 aa8.71□□□□□ -1.02
COPS3-204ENST00000462236 PPRC1Q5VV67 1664 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms