RNA–Protein interactions for RNA: ENST00000456297.6

DNMT3B-206, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 2 BASIC

Gene DNMT3B, Length 2,315 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-206ENST00000456297 CHD2O14647 1828 aaKnown RBP17.39■□□□□ 0.37
DNMT3B-206ENST00000456297 STRCP1A6NGW2 1772 aa17.38■□□□□ 0.37
DNMT3B-206ENST00000456297 ABCC11Q96J66 1382 aa17.38■□□□□ 0.37
DNMT3B-206ENST00000456297 GSE1Q14687 1217 aa17.38■□□□□ 0.37
DNMT3B-206ENST00000456297 COG6Q9Y2V7 657 aa17.38■□□□□ 0.37
DNMT3B-206ENST00000456297 TNNT2P45379 298 aaPredicted RBP17.37■□□□□ 0.37
DNMT3B-206ENST00000456297 SEC24BO95487 1268 aa17.37■□□□□ 0.37
DNMT3B-206ENST00000456297 DAXXQ9UER7 740 aaPredicted RBP17.37■□□□□ 0.37
DNMT3B-206ENST00000456297 RRP7AQ9Y3A4 280 aaKnown RBP17.37■□□□□ 0.37
DNMT3B-206ENST00000456297 PIK3R4Q99570 1358 aa17.37■□□□□ 0.37
DNMT3B-206ENST00000456297 NEUROD2Q15784 382 aa17.36■□□□□ 0.37
DNMT3B-206ENST00000456297 CENPJQ9HC77 1338 aaPredicted RBP17.36■□□□□ 0.37
DNMT3B-206ENST00000456297 PROSER2Q86WR7 435 aaPredicted RBP17.36■□□□□ 0.37
DNMT3B-206ENST00000456297 FRAT1Q92837 279 aaPredicted RBP17.36■□□□□ 0.37
DNMT3B-206ENST00000456297 BRPF3Q9ULD4 1205 aa17.36■□□□□ 0.37
DNMT3B-206ENST00000456297 POLR3AO14802 1390 aaPredicted RBP17.36■□□□□ 0.37
DNMT3B-206ENST00000456297 FRAT2O75474 233 aaPredicted RBP17.35■□□□□ 0.37
DNMT3B-206ENST00000456297 PDE3AQ14432 1141 aa17.35■□□□□ 0.37
DNMT3B-206ENST00000456297 MINK1Q8N4C8 1332 aaPredicted RBP17.35■□□□□ 0.37
DNMT3B-206ENST00000456297 XRN1Q8IZH2 1706 aaKnown RBP17.35■□□□□ 0.37
DNMT3B-206ENST00000456297 ARHGEF28Q8N1W1 1705 aaKnown RBP17.35■□□□□ 0.37
DNMT3B-206ENST00000456297 CLUAP1Q96AJ1 413 aa17.35■□□□□ 0.37
DNMT3B-206ENST00000456297 TNNQ9UQP3 1299 aa17.35■□□□□ 0.37
DNMT3B-206ENST00000456297 SLC12A5Q9H2X9 1139 aa17.34■□□□□ 0.37
DNMT3B-206ENST00000456297 NSD3Q9BZ95 1437 aa17.34■□□□□ 0.37
DNMT3B-206ENST00000456297 CGNL1Q0VF96 1302 aa17.33■□□□□ 0.37
DNMT3B-206ENST00000456297 C14orf37Q86TY3 774 aa17.33■□□□□ 0.36
DNMT3B-206ENST00000456297 TECPR2O15040 1411 aa17.33■□□□□ 0.36
DNMT3B-206ENST00000456297 RLBP1P12271 317 aa17.32■□□□□ 0.36
DNMT3B-206ENST00000456297 SHPRHQ149N8 1683 aa17.32■□□□□ 0.36
DNMT3B-206ENST00000456297 SBNO2Q9Y2G9 1366 aa17.31■□□□□ 0.36
DNMT3B-206ENST00000456297 CPS1P31327 1500 aa17.31■□□□□ 0.36
DNMT3B-206ENST00000456297 CANXP27824 592 aaKnown RBP17.31■□□□□ 0.36
DNMT3B-206ENST00000456297 NGEFQ8N5V2 710 aa17.31■□□□□ 0.36
DNMT3B-206ENST00000456297 ANO8Q9HCE9 1232 aaPredicted RBP17.31■□□□□ 0.36
DNMT3B-206ENST00000456297 NWD1Q149M9 1564 aa17.3■□□□□ 0.36
DNMT3B-206ENST00000456297 TMEM94Q12767 1356 aa17.3■□□□□ 0.36
DNMT3B-206ENST00000456297 RARSP54136 660 aaKnown RBP17.3■□□□□ 0.36
DNMT3B-206ENST00000456297 MORC1Q86VD1 984 aa17.3■□□□□ 0.36
DNMT3B-206ENST00000456297 BCL2L13Q9BXK5 485 aa17.3■□□□□ 0.36
DNMT3B-206ENST00000456297 PTCH1Q13635 1447 aa17.3■□□□□ 0.36
DNMT3B-206ENST00000456297 KNDC1Q76NI1 1749 aa17.3■□□□□ 0.36
DNMT3B-206ENST00000456297 TCP11L2Q8N4U5 519 aa17.3■□□□□ 0.36
DNMT3B-206ENST00000456297 NUTM2FA1L443 756 aa17.29■□□□□ 0.36
DNMT3B-206ENST00000456297 SLC24A1O60721 1099 aa17.29■□□□□ 0.36
DNMT3B-206ENST00000456297 PHF23Q9BUL5 403 aaPredicted RBP17.29■□□□□ 0.36
DNMT3B-206ENST00000456297 PCDHB15Q9Y5E8 787 aa17.29■□□□□ 0.36
DNMT3B-206ENST00000456297 DLC1Q96QB1 1528 aa17.29■□□□□ 0.36
DNMT3B-206ENST00000456297 IQSEC2Q5JU85 1478 aa17.29■□□□□ 0.36
DNMT3B-206ENST00000456297 FAM135BQ49AJ0 1406 aa17.29■□□□□ 0.36
DNMT3B-206ENST00000456297 QRICH2Q9H0J4 1663 aa17.29■□□□□ 0.36
DNMT3B-206ENST00000456297 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.28■□□□□ 0.36
DNMT3B-206ENST00000456297 RUNDC1Q96C34 613 aa17.27■□□□□ 0.36
DNMT3B-206ENST00000456297 VIRMAQ69YN4 1812 aaKnown RBP17.26■□□□□ 0.35
DNMT3B-206ENST00000456297 SIRT1Q96EB6 747 aa17.26■□□□□ 0.35
DNMT3B-206ENST00000456297 LRRC7Q96NW7 1537 aa17.26■□□□□ 0.35
DNMT3B-206ENST00000456297 NINLQ9Y2I6 1382 aa17.26■□□□□ 0.35
DNMT3B-206ENST00000456297 MTHFSP49914 203 aa17.26■□□□□ 0.35
DNMT3B-206ENST00000456297 MAPK8IP3Q9UPT6 1336 aa17.25■□□□□ 0.35
DNMT3B-206ENST00000456297 CABP2Q9NPB3 220 aa17.25■□□□□ 0.35
DNMT3B-206ENST00000456297 LTBP4Q8N2S1 1624 aa17.24■□□□□ 0.35
DNMT3B-206ENST00000456297 SRPK2P78362 688 aaKnown RBP17.23■□□□□ 0.35
DNMT3B-206ENST00000456297 CDK19Q9BWU1 502 aa17.23■□□□□ 0.35
DNMT3B-206ENST00000456297 NALCNQ8IZF0 1738 aa17.23■□□□□ 0.35
DNMT3B-206ENST00000456297 XIRP1Q702N8 1843 aaKnown RBP17.22■□□□□ 0.35
DNMT3B-206ENST00000456297 WASLO00401 505 aaPredicted RBP17.21■□□□□ 0.35
DNMT3B-206ENST00000456297 WDR63Q8IWG1 891 aa17.21■□□□□ 0.35
DNMT3B-206ENST00000456297 TULP4Q9NRJ4 1543 aa17.21■□□□□ 0.35
DNMT3B-206ENST00000456297 SLKQ9H2G2 1235 aaPredicted RBP17.2■□□□□ 0.34
DNMT3B-206ENST00000456297 C19orf44Q9H6X5 657 aa17.2■□□□□ 0.34
DNMT3B-206ENST00000456297 PDZRN3Q9UPQ7 1066 aa17.2■□□□□ 0.34
DNMT3B-206ENST00000456297 EVC2Q86UK5 1308 aa17.2■□□□□ 0.34
DNMT3B-206ENST00000456297 ADGRL3Q9HAR2 1447 aa17.2■□□□□ 0.34
DNMT3B-206ENST00000456297 PMFBP1Q8TBY8 1022 aa17.18■□□□□ 0.34
DNMT3B-206ENST00000456297 ATF3P18847 181 aa17.18■□□□□ 0.34
DNMT3B-206ENST00000456297 CCDC27Q2M243 656 aa17.18■□□□□ 0.34
DNMT3B-206ENST00000456297 MSH6P52701 1360 aa17.17■□□□□ 0.34
DNMT3B-206ENST00000456297 TSR2Q969E8 191 aaKnown RBP17.16■□□□□ 0.34
DNMT3B-206ENST00000456297 ANTXR1Q9H6X2 564 aa17.16■□□□□ 0.34
DNMT3B-206ENST00000456297 PRR36Q9H6K5 1346 aa17.16■□□□□ 0.34
DNMT3B-206ENST00000456297 U2AF1L5P0DN76 240 aaPredicted RBP17.16■□□□□ 0.34
DNMT3B-206ENST00000456297 U2AF1Q01081 240 aaKnown RBP eCLIP17.16■□□□□ 0.346e-10■■■■□ 19.3
DNMT3B-206ENST00000456297 TBC1D32Q96NH3 1257 aa17.16■□□□□ 0.34
DNMT3B-206ENST00000456297 NUDT16Q96DE0 195 aaKnown RBP17.15■□□□□ 0.34
DNMT3B-206ENST00000456297 USP32Q8NFA0 1604 aa17.15■□□□□ 0.34
DNMT3B-206ENST00000456297 MVPQ14764 893 aaKnown RBP17.14■□□□□ 0.33
DNMT3B-206ENST00000456297 TBC1D2Q9BYX2 928 aa17.14■□□□□ 0.33
DNMT3B-206ENST00000456297 ADGRB2O60241 1585 aa17.14■□□□□ 0.33
DNMT3B-206ENST00000456297 CFAP53Q96M91 514 aa17.13■□□□□ 0.33
DNMT3B-206ENST00000456297 RGPD8O14715 1765 aaPredicted RBP17.13■□□□□ 0.33
DNMT3B-206ENST00000456297 ANKRD36BQ8N2N9 1353 aa17.13■□□□□ 0.33
DNMT3B-206ENST00000456297 AAMPQ13685 434 aa17.13■□□□□ 0.33
DNMT3B-206ENST00000456297 BECN1Q14457 450 aa17.13■□□□□ 0.33
DNMT3B-206ENST00000456297 ORAI2Q96SN7 254 aa17.13■□□□□ 0.33
DNMT3B-206ENST00000456297 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.13■□□□□ 0.33
DNMT3B-206ENST00000456297 CADPS2Q86UW7 1296 aa17.12■□□□□ 0.33
DNMT3B-206ENST00000456297 CERKQ8TCT0 537 aa17.12■□□□□ 0.33
DNMT3B-206ENST00000456297 MYH16Q9H6N6 1097 aa17.12■□□□□ 0.33
DNMT3B-206ENST00000456297 CABP1Q9NZU7 370 aa17.12■□□□□ 0.33
DNMT3B-206ENST00000456297 NCOA3Q9Y6Q9 1424 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms