RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 SRPK2P78362 688 aaKnown RBP9.83□□□□□ -0.84
HDAC9-218ENST00000456174 METP08581 1390 aa9.83□□□□□ -0.84
HDAC9-218ENST00000456174 ABCC11Q96J66 1382 aa9.83□□□□□ -0.84
HDAC9-218ENST00000456174 USP32Q8NFA0 1604 aa9.83□□□□□ -0.84
HDAC9-218ENST00000456174 NSD3Q9BZ95 1437 aa9.82□□□□□ -0.84
HDAC9-218ENST00000456174 SLIT1O75093 1534 aa9.82□□□□□ -0.84
HDAC9-218ENST00000456174 GTF2E1P29083 439 aaPredicted RBP9.82□□□□□ -0.84
HDAC9-218ENST00000456174 LTKP29376 864 aa9.82□□□□□ -0.84
HDAC9-218ENST00000456174 WAPLQ7Z5K2 1190 aa9.82□□□□□ -0.84
HDAC9-218ENST00000456174 NAP1L2Q9ULW6 460 aaPredicted RBP9.82□□□□□ -0.84
HDAC9-218ENST00000456174 TXNDC2Q86VQ3 553 aa9.81□□□□□ -0.84
HDAC9-218ENST00000456174 ANKRD36BQ8N2N9 1353 aa9.81□□□□□ -0.84
HDAC9-218ENST00000456174 PLEKHG1Q9ULL1 1385 aa9.81□□□□□ -0.84
HDAC9-218ENST00000456174 PLEKHH1Q9ULM0 1364 aa9.81□□□□□ -0.84
HDAC9-218ENST00000456174 NINLQ9Y2I6 1382 aa9.81□□□□□ -0.84
HDAC9-218ENST00000456174 ARHGAP23Q9P227 1491 aa9.81□□□□□ -0.84
HDAC9-218ENST00000456174 ADAMTSL3P82987 1691 aa9.81□□□□□ -0.84
HDAC9-218ENST00000456174 FRAT2O75474 233 aaPredicted RBP9.81□□□□□ -0.84
HDAC9-218ENST00000456174 EID1Q9Y6B2 187 aa9.81□□□□□ -0.84
HDAC9-218ENST00000456174 ATAD2Q6PL18 1390 aa9.8□□□□□ -0.84
HDAC9-218ENST00000456174 ADAMTS13Q76LX8 1427 aa9.8□□□□□ -0.84
HDAC9-218ENST00000456174 THEMISQ8N1K5 641 aaPredicted RBP9.8□□□□□ -0.84
HDAC9-218ENST00000456174 CDK19Q9BWU1 502 aa9.8□□□□□ -0.84
HDAC9-218ENST00000456174 CPS1P31327 1500 aa9.8□□□□□ -0.84
HDAC9-218ENST00000456174 SMAP1Q8IYB5 467 aaPredicted RBP9.79□□□□□ -0.84
HDAC9-218ENST00000456174 IPO4Q8TEX9 1081 aaKnown RBP9.79□□□□□ -0.84
HDAC9-218ENST00000456174 BBXQ8WY36 941 aaPredicted RBP9.79□□□□□ -0.84
HDAC9-218ENST00000456174 NUDCQ9Y266 331 aa9.79□□□□□ -0.84
HDAC9-218ENST00000456174 TECPR2O15040 1411 aa9.79□□□□□ -0.84
HDAC9-218ENST00000456174 CGNL1Q0VF96 1302 aa9.79□□□□□ -0.84
HDAC9-218ENST00000456174 CEP170BQ9Y4F5 1589 aaPredicted RBP9.78□□□□□ -0.84
HDAC9-218ENST00000456174 FAM135BQ49AJ0 1406 aa9.78□□□□□ -0.84
HDAC9-218ENST00000456174 A0A1W2PP64 1363 aa9.78□□□□□ -0.84
HDAC9-218ENST00000456174 SENP3-EIF4A1A0A087X0R7 540 aa9.78□□□□□ -0.84
HDAC9-218ENST00000456174 SIRT1Q96EB6 747 aa9.78□□□□□ -0.84
HDAC9-218ENST00000456174 MED14O60244 1454 aa9.78□□□□□ -0.84
HDAC9-218ENST00000456174 INSRP06213 1382 aa9.78□□□□□ -0.84
HDAC9-218ENST00000456174 MORC1Q86VD1 984 aa9.78□□□□□ -0.84
HDAC9-218ENST00000456174 BLMP54132 1417 aaPredicted RBP9.77□□□□□ -0.84
HDAC9-218ENST00000456174 MAP7D2Q96T17 732 aa9.77□□□□□ -0.85
HDAC9-218ENST00000456174 TERF2IPQ9NYB0 399 aa9.77□□□□□ -0.85
HDAC9-218ENST00000456174 CD163L1Q9NR16 1453 aa9.77□□□□□ -0.85
HDAC9-218ENST00000456174 NSD2O96028 1365 aa9.76□□□□□ -0.85
HDAC9-218ENST00000456174 WDR43Q15061 677 aaKnown RBP eCLIP9.76□□□□□ -0.85
HDAC9-218ENST00000456174 SLC26A8Q96RN1 970 aa9.76□□□□□ -0.85
HDAC9-218ENST00000456174 ADAMTS8Q9UP79 889 aa9.76□□□□□ -0.85
HDAC9-218ENST00000456174 ANKRD26Q9UPS8 1709 aa9.76□□□□□ -0.85
HDAC9-218ENST00000456174 ZNF142P52746 1687 aaPredicted RBP9.76□□□□□ -0.85
HDAC9-218ENST00000456174 SETD1BQ9UPS6 1966 aaKnown RBP9.76□□□□□ -0.85
HDAC9-218ENST00000456174 WASLO00401 505 aaPredicted RBP9.76□□□□□ -0.85
HDAC9-218ENST00000456174 CABP1Q9NZU7 370 aa9.76□□□□□ -0.85
HDAC9-218ENST00000456174 DIP2AQ14689 1571 aa9.75□□□□□ -0.85
HDAC9-218ENST00000456174 ROBO2Q9HCK4 1378 aa9.75□□□□□ -0.85
HDAC9-218ENST00000456174 KIF20BQ96Q89 1820 aa9.75□□□□□ -0.85
HDAC9-218ENST00000456174 NCLP19338 710 aaKnown RBP9.75□□□□□ -0.85
HDAC9-218ENST00000456174 CANXP27824 592 aaKnown RBP9.75□□□□□ -0.85
HDAC9-218ENST00000456174 TNNT2P45379 298 aaPredicted RBP9.75□□□□□ -0.85
HDAC9-218ENST00000456174 HDGFL2Q7Z4V5 671 aaPredicted RBP9.75□□□□□ -0.85
HDAC9-218ENST00000456174 FSD2A1L4K1 749 aa9.74□□□□□ -0.85
HDAC9-218ENST00000456174 UTP14CQ5TAP6 766 aaKnown RBP9.74□□□□□ -0.85
HDAC9-218ENST00000456174 TBX22Q9Y458 520 aa9.74□□□□□ -0.85
HDAC9-218ENST00000456174 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.74□□□□□ -0.85
HDAC9-218ENST00000456174 PTPRUQ92729 1446 aa9.74□□□□□ -0.85
HDAC9-218ENST00000456174 ATP7BP35670 1465 aa9.74□□□□□ -0.85
HDAC9-218ENST00000456174 POLR3AO14802 1390 aaPredicted RBP9.73□□□□□ -0.85
HDAC9-218ENST00000456174 ADGRB2O60241 1585 aa9.73□□□□□ -0.85
HDAC9-218ENST00000456174 PLCB2Q00722 1185 aa9.73□□□□□ -0.85
HDAC9-218ENST00000456174 SHPRHQ149N8 1683 aa9.73□□□□□ -0.85
HDAC9-218ENST00000456174 XRCC6P12956 609 aaKnown RBP eCLIP9.72□□□□□ -0.85
HDAC9-218ENST00000456174 NUDT16Q96DE0 195 aaKnown RBP9.72□□□□□ -0.85
HDAC9-218ENST00000456174 ATF5Q9Y2D1 282 aaPredicted RBP9.72□□□□□ -0.85
HDAC9-218ENST00000456174 AMOTL2Q9Y2J4 779 aa9.72□□□□□ -0.85
HDAC9-218ENST00000456174 PPIP5K1Q6PFW1 1433 aa9.72□□□□□ -0.85
HDAC9-218ENST00000456174 ITSN1Q15811 1721 aa9.72□□□□□ -0.85
HDAC9-218ENST00000456174 MYCNP04198 464 aaPredicted RBP9.72□□□□□ -0.85
HDAC9-218ENST00000456174 TERF1P54274 439 aa9.72□□□□□ -0.85
HDAC9-218ENST00000456174 CHMP4BQ9H444 224 aaKnown RBP9.72□□□□□ -0.85
HDAC9-218ENST00000456174 AKAP12Q02952 1782 aa9.71□□□□□ -0.85
HDAC9-218ENST00000456174 FYB1O15117 783 aa9.71□□□□□ -0.85
HDAC9-218ENST00000456174 GGNBP2Q9H3C7 697 aa9.71□□□□□ -0.85
HDAC9-218ENST00000456174 XRN1Q8IZH2 1706 aaKnown RBP9.71□□□□□ -0.86
HDAC9-218ENST00000456174 MTHFSP49914 203 aa9.71□□□□□ -0.86
HDAC9-218ENST00000456174 FBXO3Q9UK99 471 aa9.71□□□□□ -0.86
HDAC9-218ENST00000456174 CDC42BPGQ6DT37 1551 aa9.7□□□□□ -0.86
HDAC9-218ENST00000456174 MON2Q7Z3U7 1717 aa9.7□□□□□ -0.86
HDAC9-218ENST00000456174 ESPNB1AK53 854 aa9.7□□□□□ -0.86
HDAC9-218ENST00000456174 ATXN8OSP0DMR3 200 aa9.7□□□□□ -0.86
HDAC9-218ENST00000456174 SLC4A3P48751 1232 aa9.7□□□□□ -0.86
HDAC9-218ENST00000456174 PDE3BQ13370 1112 aa9.7□□□□□ -0.86
HDAC9-218ENST00000456174 ANKLE2Q86XL3 938 aa9.7□□□□□ -0.86
HDAC9-218ENST00000456174 CCDC61Q9Y6R9 512 aa9.7□□□□□ -0.86
HDAC9-218ENST00000456174 CPSF1Q10570 1443 aaKnown RBP9.7□□□□□ -0.86
HDAC9-218ENST00000456174 PTCH1Q13635 1447 aa9.7□□□□□ -0.86
HDAC9-218ENST00000456174 CFAP53Q96M91 514 aa9.7□□□□□ -0.86
HDAC9-218ENST00000456174 NCKAP5LQ9HCH0 1330 aa9.69□□□□□ -0.86
HDAC9-218ENST00000456174 TOPAZ1Q8N9V7 1692 aa9.69□□□□□ -0.86
HDAC9-218ENST00000456174 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.69□□□□□ -0.86
HDAC9-218ENST00000456174 CHD2O14647 1828 aaKnown RBP9.69□□□□□ -0.86
HDAC9-218ENST00000456174 PRR36Q9H6K5 1346 aa9.69□□□□□ -0.86
HDAC9-218ENST00000456174 GOLGA6L3A6NEY3 463 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms