RNA–Protein interactions for RNA: ENST00000453944.1

DDX59-208, Transcript of DEAD-box helicase 59, humanhuman

TSL 3

Gene DDX59, Length 643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX59-208ENST00000453944 PRR14Q9BWN1 585 aa6.97□□□□□ -1.29
DDX59-208ENST00000453944 FKBPLQ9UIM3 349 aa6.97□□□□□ -1.29
DDX59-208ENST00000453944 TSR3Q9UJK0 312 aaKnown RBP6.97□□□□□ -1.29
DDX59-208ENST00000453944 SALL2Q9Y467 1007 aaPredicted RBP6.97□□□□□ -1.29
DDX59-208ENST00000453944 ZBBXA8MT70 800 aa6.96□□□□□ -1.3
DDX59-208ENST00000453944 JUNDP17535 347 aa6.96□□□□□ -1.3
DDX59-208ENST00000453944 CTHP32929 405 aa6.96□□□□□ -1.3
DDX59-208ENST00000453944 FAM160A2Q8N612 972 aaPredicted RBP6.96□□□□□ -1.3
DDX59-208ENST00000453944 WNT2BQ93097 391 aa6.96□□□□□ -1.3
DDX59-208ENST00000453944 WBP1LQ9NX94 342 aa6.96□□□□□ -1.3
DDX59-208ENST00000453944 NR1I2O75469 434 aa6.95□□□□□ -1.3
DDX59-208ENST00000453944 LCE2DQ5TA82 110 aaPredicted RBP6.95□□□□□ -1.3
DDX59-208ENST00000453944 ATP9BO43861 1147 aa6.94□□□□□ -1.3
DDX59-208ENST00000453944 COPS2P61201 443 aa6.94□□□□□ -1.3
DDX59-208ENST00000453944 KANK4Q5T7N3 995 aaPredicted RBP6.94□□□□□ -1.3
DDX59-208ENST00000453944 ATG7O95352 703 aa6.93□□□□□ -1.3
DDX59-208ENST00000453944 PDE4CQ08493 712 aa6.93□□□□□ -1.3
DDX59-208ENST00000453944 PTPRNQ16849 979 aa6.93□□□□□ -1.3
DDX59-208ENST00000453944 DEPDC4Q8N2C3 294 aa6.93□□□□□ -1.3
DDX59-208ENST00000453944 PRDM9Q9NQV7 894 aa6.93□□□□□ -1.3
DDX59-208ENST00000453944 TMEM88BA6NKF7 163 aa6.92□□□□□ -1.3
DDX59-208ENST00000453944 FAM174AQ8TBP5 190 aa6.92□□□□□ -1.3
DDX59-208ENST00000453944 SPSB2Q99619 263 aa6.92□□□□□ -1.3
DDX59-208ENST00000453944 OCSTAMPQ9BR26 566 aa6.92□□□□□ -1.3
DDX59-208ENST00000453944 VRTNQ9H8Y1 702 aa6.92□□□□□ -1.3
DDX59-208ENST00000453944 EVA1BQ9NVM1 165 aa6.92□□□□□ -1.3
DDX59-208ENST00000453944 BRD1O95696 1058 aa6.91□□□□□ -1.3
DDX59-208ENST00000453944 SKIP12755 728 aa6.91□□□□□ -1.3
DDX59-208ENST00000453944 RANGAP1P46060 587 aaPredicted RBP6.91□□□□□ -1.3
DDX59-208ENST00000453944 TMCO4Q5TGY1 634 aa6.91□□□□□ -1.3
DDX59-208ENST00000453944 USTQ9Y2C2 406 aa6.91□□□□□ -1.3
DDX59-208ENST00000453944 DXOO77932 396 aaKnown RBP6.9□□□□□ -1.3
DDX59-208ENST00000453944 CCNYL3P0C7X3 344 aa6.9□□□□□ -1.3
DDX59-208ENST00000453944 KCNH2Q12809 1159 aa6.9□□□□□ -1.3
DDX59-208ENST00000453944 PTCRAQ6ISU1 281 aaPredicted RBP6.9□□□□□ -1.3
DDX59-208ENST00000453944 NUDT12Q9BQG2 462 aa6.9□□□□□ -1.3
DDX59-208ENST00000453944 CEP126Q9P2H0 1117 aa6.9□□□□□ -1.3
DDX59-208ENST00000453944 TLL1O43897 1013 aa6.89□□□□□ -1.31
DDX59-208ENST00000453944 TSGA10IPQ3SY00 556 aa6.89□□□□□ -1.31
DDX59-208ENST00000453944 RGS22Q8NE09 1264 aa6.89□□□□□ -1.31
DDX59-208ENST00000453944 MTMR7Q9Y216 660 aa6.89□□□□□ -1.31
DDX59-208ENST00000453944 PCDHB9Q9Y5E1 797 aa6.89□□□□□ -1.31
DDX59-208ENST00000453944 USP17L3A6NCW0 530 aa6.88□□□□□ -1.31
DDX59-208ENST00000453944 USP17L4A6NCW7 530 aa6.88□□□□□ -1.31
DDX59-208ENST00000453944 USP17L5A8MUK1 530 aa6.88□□□□□ -1.31
DDX59-208ENST00000453944 MMP16P51512 607 aa6.88□□□□□ -1.31
DDX59-208ENST00000453944 MFAP1P55081 439 aaKnown RBP6.88□□□□□ -1.31
DDX59-208ENST00000453944 PTK2Q05397 1052 aa6.88□□□□□ -1.31
DDX59-208ENST00000453944 MSS51Q4VC12 460 aa6.88□□□□□ -1.31
DDX59-208ENST00000453944 PDXDC2PQ6P474 469 aa6.88□□□□□ -1.31
DDX59-208ENST00000453944 USP17L2Q6R6M4 530 aa6.88□□□□□ -1.31
DDX59-208ENST00000453944 USP17L1Q7RTZ2 530 aa6.88□□□□□ -1.31
DDX59-208ENST00000453944 CCDC24Q8N4L8 307 aa6.88□□□□□ -1.31
DDX59-208ENST00000453944 STK32AQ8WU08 396 aa6.88□□□□□ -1.31
DDX59-208ENST00000453944 ZC3H4Q9UPT8 1303 aaKnown RBP6.87□□□□□ -1.31
DDX59-208ENST00000453944 KCNA1Q09470 495 aa6.87□□□□□ -1.31
DDX59-208ENST00000453944 TMEM164Q5U3C3 297 aa6.87□□□□□ -1.31
DDX59-208ENST00000453944 PHTF2Q8N3S3 785 aa6.87□□□□□ -1.31
DDX59-208ENST00000453944 MKRN1Q9UHC7 482 aaKnown RBP6.87□□□□□ -1.31
DDX59-208ENST00000453944 ZMIZ1Q9ULJ6 1067 aa6.87□□□□□ -1.31
DDX59-208ENST00000453944 FOXD4L5Q5VV16 416 aaPredicted RBP6.86□□□□□ -1.31
DDX59-208ENST00000453944 THSD4Q6ZMP0 1018 aa6.86□□□□□ -1.31
DDX59-208ENST00000453944 NFATC2IPQ8NCF5 419 aa6.86□□□□□ -1.31
DDX59-208ENST00000453944 ADAM32Q8TC27 787 aa6.86□□□□□ -1.31
DDX59-208ENST00000453944 FOXD4L4Q8WXT5 416 aaPredicted RBP6.86□□□□□ -1.31
DDX59-208ENST00000453944 ZNF516Q92618 1163 aa6.86□□□□□ -1.31
DDX59-208ENST00000453944 KCTD12Q96CX2 325 aaKnown RBP6.86□□□□□ -1.31
DDX59-208ENST00000453944 IVNS1ABPQ9Y6Y0 642 aa6.86□□□□□ -1.31
DDX59-208ENST00000453944 ZPR1O75312 459 aa6.85□□□□□ -1.31
DDX59-208ENST00000453944 NCOA4Q13772 614 aa6.85□□□□□ -1.31
DDX59-208ENST00000453944 SLFNL1Q499Z3 407 aa6.85□□□□□ -1.31
DDX59-208ENST00000453944 CRTC2Q53ET0 693 aaPredicted RBP6.85□□□□□ -1.31
DDX59-208ENST00000453944 RNF135Q8IUD6 432 aa6.85□□□□□ -1.31
DDX59-208ENST00000453944 NOVA2Q9UNW9 492 aaKnown RBP6.85□□□□□ -1.31
DDX59-208ENST00000453944 POTEMA6NI47 508 aa6.84□□□□□ -1.31
DDX59-208ENST00000453944 PLEKHM2Q8IWE5 1019 aa6.84□□□□□ -1.31
DDX59-208ENST00000453944 ARMC2Q8NEN0 867 aa6.84□□□□□ -1.31
DDX59-208ENST00000453944 MTRQ99707 1265 aa6.84□□□□□ -1.31
DDX59-208ENST00000453944 ARHGAP9Q9BRR9 750 aa6.84□□□□□ -1.31
DDX59-208ENST00000453944 KRTAP3-3Q9BYR6 98 aa6.84□□□□□ -1.31
DDX59-208ENST00000453944 KRTAP3-2Q9BYR7 98 aa6.84□□□□□ -1.31
DDX59-208ENST00000453944 UNC93B1Q9H1C4 597 aa6.84□□□□□ -1.31
DDX59-208ENST00000453944 SLAIN2Q9P270 581 aa6.84□□□□□ -1.31
DDX59-208ENST00000453944 GPSM3Q9Y4H4 160 aa6.84□□□□□ -1.31
DDX59-208ENST00000453944 ADH1BP00325 375 aa6.83□□□□□ -1.32
DDX59-208ENST00000453944 RASA1P20936 1047 aa6.83□□□□□ -1.32
DDX59-208ENST00000453944 PTPN5P54829 565 aa6.83□□□□□ -1.32
DDX59-208ENST00000453944 ELOAQ14241 798 aaKnown RBP6.83□□□□□ -1.32
DDX59-208ENST00000453944 ZBTB33Q86T24 672 aa6.83□□□□□ -1.32
DDX59-208ENST00000453944 PLPP7Q8NBV4 271 aa6.83□□□□□ -1.32
DDX59-208ENST00000453944 BAP1Q92560 729 aa6.83□□□□□ -1.32
DDX59-208ENST00000453944 ZNF428Q96B54 188 aa6.83□□□□□ -1.32
DDX59-208ENST00000453944 PTK7Q13308 1070 aa6.82□□□□□ -1.32
DDX59-208ENST00000453944 NBPF14Q5TI25 921 aa6.82□□□□□ -1.32
DDX59-208ENST00000453944 PHLDB3Q6NSJ2 640 aa6.82□□□□□ -1.32
DDX59-208ENST00000453944 LARP1Q6PKG0 1096 aaKnown RBP6.82□□□□□ -1.32
DDX59-208ENST00000453944 SH3BP5LQ7L8J4 393 aa6.82□□□□□ -1.32
DDX59-208ENST00000453944 NKX2-3Q8TAU0 364 aa6.82□□□□□ -1.32
DDX59-208ENST00000453944 GPKOWQ92917 476 aaPredicted RBP eCLIP6.82□□□□□ -1.32
DDX59-208ENST00000453944 CARD14Q9BXL6 1004 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms