RNA–Protein interactions for RNA: ENST00000452950.1

CSTF1-204, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-204ENST00000452950 NDUFV2P19404 249 aa10.26□□□□□ -0.77
CSTF1-204ENST00000452950 PRPF38BQ5VTL8 546 aaKnown RBP10.26□□□□□ -0.77
CSTF1-204ENST00000452950 NKX2-3Q8TAU0 364 aa10.26□□□□□ -0.77
CSTF1-204ENST00000452950 VAC14Q08AM6 782 aa10.25□□□□□ -0.77
CSTF1-204ENST00000452950 B4GALNT3Q6L9W6 998 aa10.25□□□□□ -0.77
CSTF1-204ENST00000452950 PPP1R18Q6NYC8 613 aa10.25□□□□□ -0.77
CSTF1-204ENST00000452950 PRR14Q9BWN1 585 aa10.25□□□□□ -0.77
CSTF1-204ENST00000452950 CABLES1Q8TDN4 633 aa10.24□□□□□ -0.77
CSTF1-204ENST00000452950 ALG2Q9H553 416 aa10.24□□□□□ -0.77
CSTF1-204ENST00000452950 GNEQ9Y223 722 aaKnown RBP10.24□□□□□ -0.77
CSTF1-204ENST00000452950 ZBTB3Q9H5J0 574 aa10.23□□□□□ -0.77
CSTF1-204ENST00000452950 PCDHB3Q9Y5E6 796 aa10.23□□□□□ -0.77
CSTF1-204ENST00000452950 DDX11L8A8MPP1 907 aa10.22□□□□□ -0.77
CSTF1-204ENST00000452950 TFIP11Q9UBB9 837 aaKnown RBP10.22□□□□□ -0.77
CSTF1-204ENST00000452950 GPR37L1O60883 481 aa10.21□□□□□ -0.77
CSTF1-204ENST00000452950 ZPR1O75312 459 aa10.21□□□□□ -0.77
CSTF1-204ENST00000452950 UNCXA6NJT0 531 aa10.2□□□□□ -0.78
CSTF1-204ENST00000452950 SLC10A3P09131 477 aa10.2□□□□□ -0.78
CSTF1-204ENST00000452950 SOX11P35716 441 aa10.2□□□□□ -0.78
CSTF1-204ENST00000452950 EIF4G1Q04637 1599 aaKnown RBP10.2□□□□□ -0.78
CSTF1-204ENST00000452950 CDCA8Q53HL2 280 aa10.2□□□□□ -0.78
CSTF1-204ENST00000452950 BLOC1S3Q6QNY0 202 aa10.2□□□□□ -0.78
CSTF1-204ENST00000452950 UCN2Q96RP3 112 aa10.2□□□□□ -0.78
CSTF1-204ENST00000452950 TRIM34Q9BYJ4 488 aa10.2□□□□□ -0.78
CSTF1-204ENST00000452950 HMX1Q9NP08 348 aaPredicted RBP10.2□□□□□ -0.78
CSTF1-204ENST00000452950 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.2□□□□□ -0.78
CSTF1-204ENST00000452950 CFHP08603 1231 aa10.19□□□□□ -0.78
CSTF1-204ENST00000452950 KMT5BQ4FZB7 885 aa10.19□□□□□ -0.78
CSTF1-204ENST00000452950 RBM47A0AV96 593 aaKnown RBP10.18□□□□□ -0.78
CSTF1-204ENST00000452950 ACTN4O43707 911 aaKnown RBP10.18□□□□□ -0.78
CSTF1-204ENST00000452950 HSP90B1P14625 803 aaKnown RBP10.18□□□□□ -0.78
CSTF1-204ENST00000452950 RSPH4AQ5TD94 716 aa10.18□□□□□ -0.78
CSTF1-204ENST00000452950 MAFBQ9Y5Q3 323 aaPredicted RBP10.18□□□□□ -0.78
CSTF1-204ENST00000452950 PRR7Q8TB68 274 aa10.17□□□□□ -0.78
CSTF1-204ENST00000452950 PRKD2Q9BZL6 878 aa10.17□□□□□ -0.78
CSTF1-204ENST00000452950 CTDSPL2Q05D32 466 aa10.16□□□□□ -0.78
CSTF1-204ENST00000452950 CCER1Q8TC90 406 aaPredicted RBP10.16□□□□□ -0.78
CSTF1-204ENST00000452950 KDM4AO75164 1064 aa10.15□□□□□ -0.78
CSTF1-204ENST00000452950 GGCXP38435 758 aa10.15□□□□□ -0.78
CSTF1-204ENST00000452950 SEMA3FQ13275 785 aa10.15□□□□□ -0.78
CSTF1-204ENST00000452950 HELBQ8NG08 1087 aaPredicted RBP10.15□□□□□ -0.78
CSTF1-204ENST00000452950 USP46P62068 366 aa10.14□□□□□ -0.79
CSTF1-204ENST00000452950 RDH13Q8NBN7 331 aa10.14□□□□□ -0.79
CSTF1-204ENST00000452950 IGSF5Q9NSI5 407 aa10.14□□□□□ -0.79
CSTF1-204ENST00000452950 FDX1P10109 184 aa10.13□□□□□ -0.79
CSTF1-204ENST00000452950 ERCC3P19447 782 aa10.13□□□□□ -0.79
CSTF1-204ENST00000452950 PUS7Q96PZ0 661 aaKnown RBP10.13□□□□□ -0.79
CSTF1-204ENST00000452950 V9GY48 417 aaPredicted RBP10.12□□□□□ -0.79
CSTF1-204ENST00000452950 HOXA2O43364 376 aa10.11□□□□□ -0.79
CSTF1-204ENST00000452950 ATP9BO43861 1147 aa10.11□□□□□ -0.79
CSTF1-204ENST00000452950 TLL1O43897 1013 aa10.11□□□□□ -0.79
CSTF1-204ENST00000452950 CDK11BP21127 795 aaKnown RBP10.11□□□□□ -0.79
CSTF1-204ENST00000452950 TBC1D9Q6ZT07 1266 aa10.11□□□□□ -0.79
CSTF1-204ENST00000452950 LRRN4Q8WUT4 740 aa10.11□□□□□ -0.79
CSTF1-204ENST00000452950 TSC1Q92574 1164 aa10.11□□□□□ -0.79
CSTF1-204ENST00000452950 CDK11AQ9UQ88 783 aaPredicted RBP10.11□□□□□ -0.79
CSTF1-204ENST00000452950 ELOAQ14241 798 aaKnown RBP10.1□□□□□ -0.79
CSTF1-204ENST00000452950 GFRA3O60609 400 aa10.09□□□□□ -0.79
CSTF1-204ENST00000452950 NR1I2O75469 434 aa10.09□□□□□ -0.79
CSTF1-204ENST00000452950 MTMR2Q13614 643 aa10.09□□□□□ -0.79
CSTF1-204ENST00000452950 PUS10Q3MIT2 529 aaKnown RBP10.09□□□□□ -0.79
CSTF1-204ENST00000452950 TXNDC2Q86VQ3 553 aa10.09□□□□□ -0.79
CSTF1-204ENST00000452950 SCUBE3Q8IX30 993 aa10.09□□□□□ -0.79
CSTF1-204ENST00000452950 RNF223E7ERA6 249 aa10.08□□□□□ -0.8
CSTF1-204ENST00000452950 Q6ZNB5 142 aa10.08□□□□□ -0.8
CSTF1-204ENST00000452950 PNMA1Q8ND90 353 aa10.08□□□□□ -0.8
CSTF1-204ENST00000452950 MRRFQ96E11 262 aaKnown RBP10.08□□□□□ -0.8
CSTF1-204ENST00000452950 EIF4G2P78344 907 aaKnown RBP eCLIP10.07□□□□□ -0.8
CSTF1-204ENST00000452950 TMEM164Q5U3C3 297 aa10.07□□□□□ -0.8
CSTF1-204ENST00000452950 EPS8L1Q8TE68 723 aa10.07□□□□□ -0.8
CSTF1-204ENST00000452950 PCDHGC3Q9UN70 934 aa10.07□□□□□ -0.8
CSTF1-204ENST00000452950 S1PR4O95977 384 aa10.06□□□□□ -0.8
CSTF1-204ENST00000452950 LAPTM4AQ15012 233 aa10.06□□□□□ -0.8
CSTF1-204ENST00000452950 DNAJC14Q6Y2X3 702 aaPredicted RBP10.06□□□□□ -0.8
CSTF1-204ENST00000452950 KIAA1522Q9P206 1035 aaPredicted RBP10.06□□□□□ -0.8
CSTF1-204ENST00000452950 ZMIZ1Q9ULJ6 1067 aa10.06□□□□□ -0.8
CSTF1-204ENST00000452950 PPEF1O14829 653 aaPredicted RBP10.05□□□□□ -0.8
CSTF1-204ENST00000452950 GCGRP47871 477 aa10.05□□□□□ -0.8
CSTF1-204ENST00000452950 KANK4Q5T7N3 995 aaPredicted RBP10.05□□□□□ -0.8
CSTF1-204ENST00000452950 STK32AQ8WU08 396 aa10.05□□□□□ -0.8
CSTF1-204ENST00000452950 ADH1BP00325 375 aa10.04□□□□□ -0.8
CSTF1-204ENST00000452950 ARID4AP29374 1257 aaPredicted RBP10.04□□□□□ -0.8
CSTF1-204ENST00000452950 GUCA2AQ02747 115 aa10.04□□□□□ -0.8
CSTF1-204ENST00000452950 NOVA2Q9UNW9 492 aaKnown RBP10.04□□□□□ -0.8
CSTF1-204ENST00000452950 FUT2Q10981 343 aa10.03□□□□□ -0.8
CSTF1-204ENST00000452950 PHLDB3Q6NSJ2 640 aa10.03□□□□□ -0.8
CSTF1-204ENST00000452950 SIRT1Q96EB6 747 aa10.03□□□□□ -0.8
CSTF1-204ENST00000452950 CFAP99D6REC4 459 aa10.02□□□□□ -0.81
CSTF1-204ENST00000452950 SLC19A1P41440 591 aa10.02□□□□□ -0.81
CSTF1-204ENST00000452950 ANKLE1Q8NAG6 615 aa10.02□□□□□ -0.81
CSTF1-204ENST00000452950 EMID1Q96A84 441 aaPredicted RBP10.02□□□□□ -0.81
CSTF1-204ENST00000452950 BCL2L13Q9BXK5 485 aa10.02□□□□□ -0.81
CSTF1-204ENST00000452950 SLC6A16Q9GZN6 736 aa10.02□□□□□ -0.81
CSTF1-204ENST00000452950 ZNF16P17020 682 aaPredicted RBP10.01□□□□□ -0.81
CSTF1-204ENST00000452950 ATP6V1AP38606 617 aa10.01□□□□□ -0.81
CSTF1-204ENST00000452950 NR6A1Q15406 480 aa10.01□□□□□ -0.81
CSTF1-204ENST00000452950 MORN1Q5T089 497 aa10.01□□□□□ -0.81
CSTF1-204ENST00000452950 HLA-CQ95604 372 aa10.01□□□□□ -0.81
CSTF1-204ENST00000452950 SPSB2Q99619 263 aa10.01□□□□□ -0.81
CSTF1-204ENST00000452950 ERCC6Q03468 1493 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms