RNA–Protein interactions for RNA: ENST00000448748.1

LINC00349-201, long intergenic non-protein coding RNA 349, humanhuman

TSL 5 BASIC

Gene LINC00349, Length 841 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00349-201ENST00000448748 CSPP1Q1MSJ5 1256 aa11.9□□□□□ -0.5
LINC00349-201ENST00000448748 DDRGK1Q96HY6 314 aa11.9□□□□□ -0.5
LINC00349-201ENST00000448748 JUNDP17535 347 aa11.89□□□□□ -0.51
LINC00349-201ENST00000448748 BRPF1P55201 1214 aaPredicted RBP11.89□□□□□ -0.51
LINC00349-201ENST00000448748 RSPH6AQ9H0K4 717 aa11.89□□□□□ -0.51
LINC00349-201ENST00000448748 POLR3EQ9NVU0 708 aa11.89□□□□□ -0.51
LINC00349-201ENST00000448748 HRCP23327 699 aa11.88□□□□□ -0.51
LINC00349-201ENST00000448748 PRR7Q8TB68 274 aa11.88□□□□□ -0.51
LINC00349-201ENST00000448748 CABLES1Q8TDN4 633 aa11.88□□□□□ -0.51
LINC00349-201ENST00000448748 CLK2P49760 499 aaKnown RBP11.87□□□□□ -0.51
LINC00349-201ENST00000448748 SPRYD7Q5W111 196 aa11.87□□□□□ -0.51
LINC00349-201ENST00000448748 ZBTB3Q9H5J0 574 aa11.87□□□□□ -0.51
LINC00349-201ENST00000448748 RIMBP3CA6NJZ7 1639 aa11.86□□□□□ -0.51
LINC00349-201ENST00000448748 RIMBP3BA6NNM3 1639 aa11.86□□□□□ -0.51
LINC00349-201ENST00000448748 RIMBP3Q9UFD9 1639 aa11.86□□□□□ -0.51
LINC00349-201ENST00000448748 SPDYE5A6NIY4 337 aa11.86□□□□□ -0.51
LINC00349-201ENST00000448748 IRX2Q9BZI1 471 aaPredicted RBP11.86□□□□□ -0.51
LINC00349-201ENST00000448748 QPCTQ16769 361 aa11.85□□□□□ -0.51
LINC00349-201ENST00000448748 TUSC1Q2TAM9 212 aa11.85□□□□□ -0.51
LINC00349-201ENST00000448748 PRPF38BQ5VTL8 546 aaKnown RBP11.85□□□□□ -0.51
LINC00349-201ENST00000448748 CCDC24Q8N4L8 307 aa11.85□□□□□ -0.51
LINC00349-201ENST00000448748 ARHGEF11O15085 1522 aa11.85□□□□□ -0.51
LINC00349-201ENST00000448748 GRIN2AQ12879 1464 aa11.84□□□□□ -0.51
LINC00349-201ENST00000448748 CFAP99D6REC4 459 aa11.83□□□□□ -0.52
LINC00349-201ENST00000448748 LILRB3O75022 631 aa11.83□□□□□ -0.52
LINC00349-201ENST00000448748 SH3D19Q5HYK7 790 aa11.83□□□□□ -0.52
LINC00349-201ENST00000448748 ZNF598Q86UK7 904 aaKnown RBP11.83□□□□□ -0.52
LINC00349-201ENST00000448748 FHAD1B1AJZ9 1412 aa11.83□□□□□ -0.52
LINC00349-201ENST00000448748 NUP160Q12769 1436 aa11.83□□□□□ -0.52
LINC00349-201ENST00000448748 RPIAP49247 311 aa11.82□□□□□ -0.52
LINC00349-201ENST00000448748 SKIV2LQ15477 1246 aaKnown RBP11.82□□□□□ -0.52
LINC00349-201ENST00000448748 ZNF697Q5TEC3 545 aa11.82□□□□□ -0.52
LINC00349-201ENST00000448748 NUDT12Q9BQG2 462 aa11.82□□□□□ -0.52
LINC00349-201ENST00000448748 CUL7Q14999 1698 aa11.81□□□□□ -0.52
LINC00349-201ENST00000448748 CEP170Q5SW79 1584 aa11.81□□□□□ -0.52
LINC00349-201ENST00000448748 NUTM2BA6NNL0 878 aaPredicted RBP11.81□□□□□ -0.52
LINC00349-201ENST00000448748 NUTM2EB1AL46 878 aaPredicted RBP11.81□□□□□ -0.52
LINC00349-201ENST00000448748 NUTM2DQ5VT03 806 aaPredicted RBP11.81□□□□□ -0.52
LINC00349-201ENST00000448748 NUTM2AQ8IVF1 878 aaPredicted RBP11.81□□□□□ -0.52
LINC00349-201ENST00000448748 IL27Q8NEV9 243 aa11.81□□□□□ -0.52
LINC00349-201ENST00000448748 SHROOM2Q13796 1616 aa11.8□□□□□ -0.52
LINC00349-201ENST00000448748 ZBTB24O43167 697 aaPredicted RBP11.8□□□□□ -0.52
LINC00349-201ENST00000448748 DESI1Q6ICB0 168 aa11.8□□□□□ -0.52
LINC00349-201ENST00000448748 PROCA1Q8NCQ7 364 aaPredicted RBP11.8□□□□□ -0.52
LINC00349-201ENST00000448748 RTL5Q5HYW3 569 aaPredicted RBP11.79□□□□□ -0.52
LINC00349-201ENST00000448748 TRIM67Q6ZTA4 783 aa11.79□□□□□ -0.52
LINC00349-201ENST00000448748 KIF27Q86VH2 1401 aa11.78□□□□□ -0.52
LINC00349-201ENST00000448748 GFRA3O60609 400 aa11.78□□□□□ -0.52
LINC00349-201ENST00000448748 CCNYL3P0C7X3 344 aa11.78□□□□□ -0.52
LINC00349-201ENST00000448748 PTPRNQ16849 979 aa11.78□□□□□ -0.52
LINC00349-201ENST00000448748 CD2BP2O95400 341 aaKnown RBP11.77□□□□□ -0.53
LINC00349-201ENST00000448748 TRIM32Q13049 653 aa11.77□□□□□ -0.53
LINC00349-201ENST00000448748 PTCRAQ6ISU1 281 aaPredicted RBP11.77□□□□□ -0.53
LINC00349-201ENST00000448748 TSC1Q92574 1164 aa11.77□□□□□ -0.53
LINC00349-201ENST00000448748 PDZRN3Q9UPQ7 1066 aa11.77□□□□□ -0.53
LINC00349-201ENST00000448748 RUSC2Q8N2Y8 1516 aa11.76□□□□□ -0.53
LINC00349-201ENST00000448748 FBXO31Q5XUX0 539 aaPredicted RBP11.76□□□□□ -0.53
LINC00349-201ENST00000448748 CHMP7Q8WUX9 453 aaPredicted RBP11.76□□□□□ -0.53
LINC00349-201ENST00000448748 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.76□□□□□ -0.53
LINC00349-201ENST00000448748 ATP1B4Q9UN42 357 aaPredicted RBP11.76□□□□□ -0.53
LINC00349-201ENST00000448748 IGF1RP08069 1367 aa11.76□□□□□ -0.53
LINC00349-201ENST00000448748 ARAP1Q96P48 1450 aa11.76□□□□□ -0.53
LINC00349-201ENST00000448748 LYPD8Q6UX82 237 aa11.75□□□□□ -0.53
LINC00349-201ENST00000448748 GDF9O60383 454 aa11.74□□□□□ -0.53
LINC00349-201ENST00000448748 EVA1BQ9NVM1 165 aa11.74□□□□□ -0.53
LINC00349-201ENST00000448748 TNFRSF10AO00220 468 aa11.73□□□□□ -0.53
LINC00349-201ENST00000448748 PER1O15534 1290 aaPredicted RBP11.73□□□□□ -0.53
LINC00349-201ENST00000448748 FOXC1Q12948 553 aa11.73□□□□□ -0.53
LINC00349-201ENST00000448748 PKD2L1Q9P0L9 805 aa11.73□□□□□ -0.53
LINC00349-201ENST00000448748 NRG2O14511 850 aaPredicted RBP11.72□□□□□ -0.53
LINC00349-201ENST00000448748 LAPTM4AQ15012 233 aa11.72□□□□□ -0.53
LINC00349-201ENST00000448748 PRR20EP86478 221 aa11.71□□□□□ -0.53
LINC00349-201ENST00000448748 PRR20CP86479 221 aa11.71□□□□□ -0.53
LINC00349-201ENST00000448748 PRR20DP86480 221 aa11.71□□□□□ -0.53
LINC00349-201ENST00000448748 PRR20BP86481 221 aa11.71□□□□□ -0.53
LINC00349-201ENST00000448748 PRR20AP86496 221 aa11.71□□□□□ -0.53
LINC00349-201ENST00000448748 KCNH2Q12809 1159 aa11.71□□□□□ -0.53
LINC00349-201ENST00000448748 GOPCQ9HD26 462 aa11.71□□□□□ -0.53
LINC00349-201ENST00000448748 HELBQ8NG08 1087 aaPredicted RBP11.7□□□□□ -0.54
LINC00349-201ENST00000448748 UNC93B1Q9H1C4 597 aa11.7□□□□□ -0.54
LINC00349-201ENST00000448748 CTHP32929 405 aa11.69□□□□□ -0.54
LINC00349-201ENST00000448748 PPP2R2DQ66LE6 453 aa11.69□□□□□ -0.54
LINC00349-201ENST00000448748 MAP10Q9P2G4 905 aa11.69□□□□□ -0.54
LINC00349-201ENST00000448748 ERCC6L2Q5T890 1561 aa11.69□□□□□ -0.54
LINC00349-201ENST00000448748 F12P00748 615 aaPredicted RBP11.68□□□□□ -0.54
LINC00349-201ENST00000448748 SKOR1P84550 965 aa11.68□□□□□ -0.54
LINC00349-201ENST00000448748 PCMTD1Q96MG8 357 aaPredicted RBP11.68□□□□□ -0.54
LINC00349-201ENST00000448748 CTDSPL2Q05D32 466 aa11.67□□□□□ -0.54
LINC00349-201ENST00000448748 Q6ZNB5 142 aa11.67□□□□□ -0.54
LINC00349-201ENST00000448748 KIAA0586Q9BVV6 1533 aa11.65□□□□□ -0.54
LINC00349-201ENST00000448748 WNT7AO00755 349 aa11.65□□□□□ -0.54
LINC00349-201ENST00000448748 WNT7BP56706 349 aa11.65□□□□□ -0.54
LINC00349-201ENST00000448748 CARMIL1Q5VZK9 1371 aa11.65□□□□□ -0.55
LINC00349-201ENST00000448748 LINC01559Q495D7 138 aa11.64□□□□□ -0.55
LINC00349-201ENST00000448748 BAP1Q92560 729 aa11.64□□□□□ -0.55
LINC00349-201ENST00000448748 SH3BP2P78314 561 aa11.63□□□□□ -0.55
LINC00349-201ENST00000448748 RC3H1Q5TC82 1133 aaKnown RBP11.63□□□□□ -0.55
LINC00349-201ENST00000448748 MRGPRX2Q96LB1 330 aa11.63□□□□□ -0.55
LINC00349-201ENST00000448748 PRXQ9BXM0 1461 aa11.63□□□□□ -0.55
LINC00349-201ENST00000448748 RFC5P40937 340 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms