RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 NOLC1Q14978 699 aaKnown RBP eCLIP11.57□□□□□ -0.56
SYNPO2-204ENST00000448416 MPNDQ8N594 471 aa11.57□□□□□ -0.56
SYNPO2-204ENST00000448416 CCDC141Q6ZP82 1450 aa11.57□□□□□ -0.56
SYNPO2-204ENST00000448416 TRIM27P14373 513 aa11.57□□□□□ -0.56
SYNPO2-204ENST00000448416 PKP1Q13835 747 aa11.57□□□□□ -0.56
SYNPO2-204ENST00000448416 ZNF771Q7L3S4 317 aaPredicted RBP11.57□□□□□ -0.56
SYNPO2-204ENST00000448416 IPO4Q8TEX9 1081 aaKnown RBP11.57□□□□□ -0.56
SYNPO2-204ENST00000448416 VGLL3A8MV65 326 aa11.56□□□□□ -0.56
SYNPO2-204ENST00000448416 CDK11BP21127 795 aaKnown RBP11.56□□□□□ -0.56
SYNPO2-204ENST00000448416 TBC1D9Q6ZT07 1266 aa11.56□□□□□ -0.56
SYNPO2-204ENST00000448416 ADCY10Q96PN6 1610 aa11.56□□□□□ -0.56
SYNPO2-204ENST00000448416 GRIN2AQ12879 1464 aa11.56□□□□□ -0.56
SYNPO2-204ENST00000448416 BCL2L12Q9HB09 334 aa11.56□□□□□ -0.56
SYNPO2-204ENST00000448416 PIBF1Q8WXW3 757 aa11.55□□□□□ -0.56
SYNPO2-204ENST00000448416 CYP2E1P05181 493 aaPredicted RBP11.55□□□□□ -0.56
SYNPO2-204ENST00000448416 ZNF830Q96NB3 372 aaPredicted RBP11.55□□□□□ -0.56
SYNPO2-204ENST00000448416 SHANK2Q9UPX8 1470 aa11.55□□□□□ -0.56
SYNPO2-204ENST00000448416 HNRNPMP52272 730 aaKnown RBP eCLIP11.55□□□□□ -0.56
SYNPO2-204ENST00000448416 ANKRD45Q5TZF3 282 aa11.55□□□□□ -0.56
SYNPO2-204ENST00000448416 RAPGEF6Q8TEU7 1601 aa11.54□□□□□ -0.56
SYNPO2-204ENST00000448416 POLR3AO14802 1390 aaPredicted RBP11.54□□□□□ -0.56
SYNPO2-204ENST00000448416 RABEP1Q15276 862 aa11.54□□□□□ -0.56
SYNPO2-204ENST00000448416 ATF7IPQ6VMQ6 1270 aa11.54□□□□□ -0.56
SYNPO2-204ENST00000448416 SHROOM2Q13796 1616 aa11.54□□□□□ -0.56
SYNPO2-204ENST00000448416 PLA2R1Q13018 1463 aa11.54□□□□□ -0.56
SYNPO2-204ENST00000448416 PHF23Q9BUL5 403 aaPredicted RBP11.54□□□□□ -0.56
SYNPO2-204ENST00000448416 TSPY26PQ9H489 355 aa11.54□□□□□ -0.56
SYNPO2-204ENST00000448416 U2AF2P26368 475 aaKnown RBP eCLIP11.54□□□□□ -0.56
SYNPO2-204ENST00000448416 CWC22Q9HCG8 908 aaKnown RBP11.54□□□□□ -0.56
SYNPO2-204ENST00000448416 TMEM57Q8N5G2 664 aa11.53□□□□□ -0.56
SYNPO2-204ENST00000448416 NSFL1CQ9UNZ2 370 aaKnown RBP11.53□□□□□ -0.56
SYNPO2-204ENST00000448416 ZBTB40Q9NUA8 1239 aa11.53□□□□□ -0.56
SYNPO2-204ENST00000448416 URB2Q14146 1524 aaKnown RBP11.53□□□□□ -0.56
SYNPO2-204ENST00000448416 MBD3O95983 291 aa11.53□□□□□ -0.56
SYNPO2-204ENST00000448416 MYO5CQ9NQX4 1742 aa11.52□□□□□ -0.56
SYNPO2-204ENST00000448416 C17orf53Q8N3J3 647 aaPredicted RBP11.52□□□□□ -0.56
SYNPO2-204ENST00000448416 ZBTB22O15209 634 aa11.52□□□□□ -0.57
SYNPO2-204ENST00000448416 TSR2Q969E8 191 aaKnown RBP11.52□□□□□ -0.57
SYNPO2-204ENST00000448416 SSH1Q8WYL5 1049 aa11.52□□□□□ -0.57
SYNPO2-204ENST00000448416 CHAMP1Q96JM3 812 aa11.52□□□□□ -0.57
SYNPO2-204ENST00000448416 NOB1Q9ULX3 412 aaKnown RBP11.52□□□□□ -0.57
SYNPO2-204ENST00000448416 CCDC27Q2M243 656 aa11.52□□□□□ -0.57
SYNPO2-204ENST00000448416 FOXD4L5Q5VV16 416 aaPredicted RBP11.52□□□□□ -0.57
SYNPO2-204ENST00000448416 FOXD4L4Q8WXT5 416 aaPredicted RBP11.52□□□□□ -0.57
SYNPO2-204ENST00000448416 TTC12Q9H892 705 aaPredicted RBP11.52□□□□□ -0.57
SYNPO2-204ENST00000448416 CT47B1P0C2W7 299 aaPredicted RBP11.51□□□□□ -0.57
SYNPO2-204ENST00000448416 EXOSC9Q06265 439 aaKnown RBP11.51□□□□□ -0.57
SYNPO2-204ENST00000448416 CHAF1AQ13111 956 aaPredicted RBP11.51□□□□□ -0.57
SYNPO2-204ENST00000448416 CARD14Q9BXL6 1004 aa11.51□□□□□ -0.57
SYNPO2-204ENST00000448416 KANK1Q14678 1352 aa11.51□□□□□ -0.57
SYNPO2-204ENST00000448416 CDC45O75419 566 aa11.51□□□□□ -0.57
SYNPO2-204ENST00000448416 ZGPATQ8N5A5 531 aaKnown RBP11.51□□□□□ -0.57
SYNPO2-204ENST00000448416 MORC1Q86VD1 984 aa11.51□□□□□ -0.57
SYNPO2-204ENST00000448416 PLCD3Q8N3E9 789 aa11.51□□□□□ -0.57
SYNPO2-204ENST00000448416 DIAPH3Q9NSV4 1193 aa11.51□□□□□ -0.57
SYNPO2-204ENST00000448416 FKBP5Q13451 457 aaPredicted RBP11.5□□□□□ -0.57
SYNPO2-204ENST00000448416 CDC42BPAQ5VT25 1732 aa11.5□□□□□ -0.57
SYNPO2-204ENST00000448416 SYAP1Q96A49 352 aaPredicted RBP11.5□□□□□ -0.57
SYNPO2-204ENST00000448416 FEZ1Q99689 392 aa11.49□□□□□ -0.57
SYNPO2-204ENST00000448416 ZDHHC9Q9Y397 364 aa11.49□□□□□ -0.57
SYNPO2-204ENST00000448416 SYNJ2O15056 1496 aa11.49□□□□□ -0.57
SYNPO2-204ENST00000448416 IPO8O15397 1037 aaKnown RBP11.49□□□□□ -0.57
SYNPO2-204ENST00000448416 ST18O60284 1047 aa11.49□□□□□ -0.57
SYNPO2-204ENST00000448416 TAF7LQ5H9L4 462 aa11.49□□□□□ -0.57
SYNPO2-204ENST00000448416 USP25Q9UHP3 1055 aa11.49□□□□□ -0.57
SYNPO2-204ENST00000448416 SCAF11Q99590 1463 aaKnown RBP11.49□□□□□ -0.57
SYNPO2-204ENST00000448416 RNF17Q9BXT8 1623 aaKnown RBP11.49□□□□□ -0.57
SYNPO2-204ENST00000448416 PLEKHD1A6NEE1 506 aa11.48□□□□□ -0.57
SYNPO2-204ENST00000448416 RIOK3O14730 519 aaKnown RBP11.48□□□□□ -0.57
SYNPO2-204ENST00000448416 OGFRQ9NZT2 677 aa11.48□□□□□ -0.57
SYNPO2-204ENST00000448416 KIAA0556O60303 1618 aa11.48□□□□□ -0.57
SYNPO2-204ENST00000448416 KCNJ4P48050 445 aa11.48□□□□□ -0.57
SYNPO2-204ENST00000448416 GCC1Q96CN9 775 aa11.48□□□□□ -0.57
SYNPO2-204ENST00000448416 SPTLC3Q9NUV7 552 aa11.48□□□□□ -0.57
SYNPO2-204ENST00000448416 MYOM1P52179 1685 aa11.48□□□□□ -0.57
SYNPO2-204ENST00000448416 IQSEC2Q5JU85 1478 aa11.47□□□□□ -0.57
SYNPO2-204ENST00000448416 ANKRD7Q92527 254 aa11.47□□□□□ -0.57
SYNPO2-204ENST00000448416 PDS5BQ9NTI5 1447 aa11.47□□□□□ -0.57
SYNPO2-204ENST00000448416 CFAP53Q96M91 514 aa11.47□□□□□ -0.57
SYNPO2-204ENST00000448416 DISP1Q96F81 1524 aa11.47□□□□□ -0.57
SYNPO2-204ENST00000448416 PBRM1Q86U86 1689 aa11.47□□□□□ -0.57
SYNPO2-204ENST00000448416 CFAP74Q9C0B2 1584 aa11.47□□□□□ -0.57
SYNPO2-204ENST00000448416 PHF14O94880 888 aa11.47□□□□□ -0.57
SYNPO2-204ENST00000448416 ADCY5O95622 1261 aa11.47□□□□□ -0.57
SYNPO2-204ENST00000448416 UVSSAQ2YD98 709 aa11.46□□□□□ -0.57
SYNPO2-204ENST00000448416 U2AF1L5P0DN76 240 aaPredicted RBP11.46□□□□□ -0.57
SYNPO2-204ENST00000448416 U2AF1Q01081 240 aaKnown RBP eCLIP11.46□□□□□ -0.57
SYNPO2-204ENST00000448416 FAM184AQ8NB25 1140 aa11.46□□□□□ -0.57
SYNPO2-204ENST00000448416 IQGAP1P46940 1657 aa11.46□□□□□ -0.57
SYNPO2-204ENST00000448416 GABPB1Q06547 395 aaPredicted RBP11.46□□□□□ -0.58
SYNPO2-204ENST00000448416 MTHFSP49914 203 aa11.45□□□□□ -0.58
SYNPO2-204ENST00000448416 PLCB2Q00722 1185 aa11.45□□□□□ -0.58
SYNPO2-204ENST00000448416 KDM5AP29375 1690 aaKnown RBP11.45□□□□□ -0.58
SYNPO2-204ENST00000448416 IRX5P78411 483 aaPredicted RBP11.45□□□□□ -0.58
SYNPO2-204ENST00000448416 MAPK8IP2Q13387 824 aaPredicted RBP11.45□□□□□ -0.58
SYNPO2-204ENST00000448416 CFAP44Q96MT7 982 aa11.45□□□□□ -0.58
SYNPO2-204ENST00000448416 CCDC66A2RUB6 948 aa11.45□□□□□ -0.58
SYNPO2-204ENST00000448416 USP26Q9BXU7 913 aa11.45□□□□□ -0.58
SYNPO2-204ENST00000448416 C1orf115Q9H7X2 142 aa11.44□□□□□ -0.58
SYNPO2-204ENST00000448416 PLB1Q6P1J6 1458 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms