RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 ADGRB1O14514 1584 aa7.83□□□□□ -1.16
PROM1-201ENST00000447510 SBNO2Q9Y2G9 1366 aa7.83□□□□□ -1.16
PROM1-201ENST00000447510 NLRP13Q86W25 1043 aa7.83□□□□□ -1.16
PROM1-201ENST00000447510 PPP4R2Q9NY27 417 aa7.83□□□□□ -1.16
PROM1-201ENST00000447510 NKTRP30414 1462 aaKnown RBP7.82□□□□□ -1.16
PROM1-201ENST00000447510 AMPHP49418 695 aa7.82□□□□□ -1.16
PROM1-201ENST00000447510 MRS2Q9HD23 443 aa7.82□□□□□ -1.16
PROM1-201ENST00000447510 PRR36Q9H6K5 1346 aa7.82□□□□□ -1.16
PROM1-201ENST00000447510 TECPR2O15040 1411 aa7.82□□□□□ -1.16
PROM1-201ENST00000447510 NSD3Q9BZ95 1437 aa7.81□□□□□ -1.16
PROM1-201ENST00000447510 POLR1AO95602 1720 aaPredicted RBP7.81□□□□□ -1.16
PROM1-201ENST00000447510 MEX3CQ5U5Q3 659 aaKnown RBP7.81□□□□□ -1.16
PROM1-201ENST00000447510 NME9Q86XW9 330 aa7.81□□□□□ -1.16
PROM1-201ENST00000447510 BRPF3Q9ULD4 1205 aa7.81□□□□□ -1.16
PROM1-201ENST00000447510 NINLQ9Y2I6 1382 aa7.81□□□□□ -1.16
PROM1-201ENST00000447510 ASXL1Q8IXJ9 1541 aa7.81□□□□□ -1.16
PROM1-201ENST00000447510 KIAA1210Q9ULL0 1709 aa7.81□□□□□ -1.16
PROM1-201ENST00000447510 CSB-PGBD3P0DP91 1061 aa7.81□□□□□ -1.16
PROM1-201ENST00000447510 IFT172Q9UG01 1749 aa7.81□□□□□ -1.16
PROM1-201ENST00000447510 DLC1Q96QB1 1528 aa7.81□□□□□ -1.16
PROM1-201ENST00000447510 PLEKHG3A1L390 1219 aa7.81□□□□□ -1.16
PROM1-201ENST00000447510 WDR43Q15061 677 aaKnown RBP eCLIP7.81□□□□□ -1.16
PROM1-201ENST00000447510 FAM9BQ8IZU0 186 aa7.8□□□□□ -1.16
PROM1-201ENST00000447510 LTV1Q96GA3 475 aaPredicted RBP7.8□□□□□ -1.16
PROM1-201ENST00000447510 RALBP1Q15311 655 aa7.8□□□□□ -1.16
PROM1-201ENST00000447510 BRINP3Q76B58 766 aa7.8□□□□□ -1.16
PROM1-201ENST00000447510 TTC21BQ7Z4L5 1316 aa7.8□□□□□ -1.16
PROM1-201ENST00000447510 LRRC59Q96AG4 307 aaKnown RBP7.8□□□□□ -1.16
PROM1-201ENST00000447510 CCDC9Q9Y3X0 531 aaKnown RBP7.8□□□□□ -1.16
PROM1-201ENST00000447510 U2SURPO15042 1029 aaKnown RBP7.79□□□□□ -1.16
PROM1-201ENST00000447510 CPS1P31327 1500 aa7.79□□□□□ -1.16
PROM1-201ENST00000447510 ANKRD36BQ8N2N9 1353 aa7.79□□□□□ -1.16
PROM1-201ENST00000447510 ZC3H6P61129 1189 aaKnown RBP7.79□□□□□ -1.16
PROM1-201ENST00000447510 A0A0G2JS52 829 aa7.79□□□□□ -1.16
PROM1-201ENST00000447510 NUDCQ9Y266 331 aa7.79□□□□□ -1.16
PROM1-201ENST00000447510 A0A1W2PP64 1363 aa7.79□□□□□ -1.16
PROM1-201ENST00000447510 LRRC7Q96NW7 1537 aa7.79□□□□□ -1.16
PROM1-201ENST00000447510 ADAMTS2O95450 1211 aa7.78□□□□□ -1.16
PROM1-201ENST00000447510 EVA1CP58658 441 aa7.78□□□□□ -1.16
PROM1-201ENST00000447510 IPO9Q96P70 1041 aaKnown RBP7.78□□□□□ -1.16
PROM1-201ENST00000447510 NRXN3Q9Y4C0 1643 aa7.78□□□□□ -1.16
PROM1-201ENST00000447510 NCOA3Q9Y6Q9 1424 aa7.78□□□□□ -1.16
PROM1-201ENST00000447510 CABLES1Q8TDN4 633 aa7.78□□□□□ -1.16
PROM1-201ENST00000447510 PRDM11Q9NQV5 511 aa7.78□□□□□ -1.16
PROM1-201ENST00000447510 CARD14Q9BXL6 1004 aa7.78□□□□□ -1.16
PROM1-201ENST00000447510 ZRANB1Q9UGI0 708 aa7.78□□□□□ -1.16
PROM1-201ENST00000447510 TTC21AQ8NDW8 1320 aa7.77□□□□□ -1.16
PROM1-201ENST00000447510 C1orf167Q5SNV9 1468 aa7.77□□□□□ -1.16
PROM1-201ENST00000447510 QRICH2Q9H0J4 1663 aa7.77□□□□□ -1.16
PROM1-201ENST00000447510 ANKARQ7Z5J8 1434 aa7.77□□□□□ -1.17
PROM1-201ENST00000447510 FYB1O15117 783 aa7.77□□□□□ -1.17
PROM1-201ENST00000447510 VSIG10Q8N0Z9 540 aa7.77□□□□□ -1.17
PROM1-201ENST00000447510 PRKRIP1Q9H875 184 aaPredicted RBP7.77□□□□□ -1.17
PROM1-201ENST00000447510 RRS1Q15050 365 aaKnown RBP7.77□□□□□ -1.17
PROM1-201ENST00000447510 KCNH5Q8NCM2 988 aa7.77□□□□□ -1.17
PROM1-201ENST00000447510 DAXXQ9UER7 740 aaPredicted RBP7.77□□□□□ -1.17
PROM1-201ENST00000447510 GLIPR1L2Q4G1C9 344 aa7.76□□□□□ -1.17
PROM1-201ENST00000447510 ARXQ96QS3 562 aa7.76□□□□□ -1.17
PROM1-201ENST00000447510 TULP4Q9NRJ4 1543 aa7.76□□□□□ -1.17
PROM1-201ENST00000447510 STRCQ7RTU9 1775 aa7.76□□□□□ -1.17
PROM1-201ENST00000447510 MTHFSP49914 203 aa7.75□□□□□ -1.17
PROM1-201ENST00000447510 STRN4Q9NRL3 753 aa7.75□□□□□ -1.17
PROM1-201ENST00000447510 MYBBP1AQ9BQG0 1328 aaKnown RBP7.75□□□□□ -1.17
PROM1-201ENST00000447510 FBLN1P23142 703 aa7.75□□□□□ -1.17
PROM1-201ENST00000447510 ARHGEF28Q8N1W1 1705 aaKnown RBP7.75□□□□□ -1.17
PROM1-201ENST00000447510 U2AF1L5P0DN76 240 aaPredicted RBP7.75□□□□□ -1.17
PROM1-201ENST00000447510 U2AF1Q01081 240 aaKnown RBP eCLIP7.75□□□□□ -1.17
PROM1-201ENST00000447510 DCCP43146 1447 aa7.75□□□□□ -1.17
PROM1-201ENST00000447510 CCER2I3L3R5 266 aa7.74□□□□□ -1.17
PROM1-201ENST00000447510 EDC4Q6P2E9 1401 aaKnown RBP7.74□□□□□ -1.17
PROM1-201ENST00000447510 NGLY1Q96IV0 654 aa7.74□□□□□ -1.17
PROM1-201ENST00000447510 CHD2O14647 1828 aaKnown RBP7.74□□□□□ -1.17
PROM1-201ENST00000447510 MST1RQ04912 1400 aa7.74□□□□□ -1.17
PROM1-201ENST00000447510 CHRNA2Q15822 529 aa7.74□□□□□ -1.17
PROM1-201ENST00000447510 NLRP2Q9NX02 1062 aa7.74□□□□□ -1.17
PROM1-201ENST00000447510 USP35Q9P2H5 1018 aa7.74□□□□□ -1.17
PROM1-201ENST00000447510 GCP02774 474 aa7.73□□□□□ -1.17
PROM1-201ENST00000447510 PPP2R1AP30153 589 aa7.73□□□□□ -1.17
PROM1-201ENST00000447510 AMER1Q5JTC6 1135 aaPredicted RBP7.73□□□□□ -1.17
PROM1-201ENST00000447510 ARHGEF10O15013 1369 aa7.73□□□□□ -1.17
PROM1-201ENST00000447510 ATP7BP35670 1465 aa7.73□□□□□ -1.17
PROM1-201ENST00000447510 PHF23Q9BUL5 403 aaPredicted RBP7.73□□□□□ -1.17
PROM1-201ENST00000447510 USP6P35125 1406 aa7.73□□□□□ -1.17
PROM1-201ENST00000447510 PER1O15534 1290 aaPredicted RBP7.73□□□□□ -1.17
PROM1-201ENST00000447510 DIAPH1O60610 1272 aaKnown RBP7.73□□□□□ -1.17
PROM1-201ENST00000447510 HSPA1LP34931 641 aa7.73□□□□□ -1.17
PROM1-201ENST00000447510 EMILIN1Q9Y6C2 1016 aa7.73□□□□□ -1.17
PROM1-201ENST00000447510 MAPK8IP3Q9UPT6 1336 aa7.73□□□□□ -1.17
PROM1-201ENST00000447510 XRN1Q8IZH2 1706 aaKnown RBP7.72□□□□□ -1.17
PROM1-201ENST00000447510 C8orf37Q96NL8 207 aa7.72□□□□□ -1.17
PROM1-201ENST00000447510 NSD2O96028 1365 aa7.72□□□□□ -1.17
PROM1-201ENST00000447510 SPATA31A3Q5VYP0 1347 aa7.72□□□□□ -1.17
PROM1-201ENST00000447510 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.71□□□□□ -1.17
PROM1-201ENST00000447510 NEUROD2Q15784 382 aa7.71□□□□□ -1.17
PROM1-201ENST00000447510 TOM1L2Q6ZVM7 507 aa7.71□□□□□ -1.17
PROM1-201ENST00000447510 NWD1Q149M9 1564 aa7.71□□□□□ -1.17
PROM1-201ENST00000447510 CDC42BPGQ6DT37 1551 aa7.71□□□□□ -1.18
PROM1-201ENST00000447510 PNNQ9H307 717 aaKnown RBP7.7□□□□□ -1.18
PROM1-201ENST00000447510 PODXL2Q9NZ53 605 aa7.7□□□□□ -1.18
PROM1-201ENST00000447510 BRD4O60885 1362 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms