RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 CRBNQ96SW2 442 aa13.56□□□□□ -0.24
FN1-211ENST00000443816 PTPN23Q9H3S7 1636 aa13.56□□□□□ -0.24
FN1-211ENST00000443816 DMRT2Q9Y5R5 561 aa13.56□□□□□ -0.24
FN1-211ENST00000443816 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.55□□□□□ -0.24
FN1-211ENST00000443816 FAM177BA6PVY3 158 aa13.55□□□□□ -0.24
FN1-211ENST00000443816 ODF2Q5BJF6 829 aa13.55□□□□□ -0.24
FN1-211ENST00000443816 CD109Q6YHK3 1445 aa13.55□□□□□ -0.24
FN1-211ENST00000443816 CCDC158Q5M9N0 1113 aa13.54□□□□□ -0.24
FN1-211ENST00000443816 IPO9Q96P70 1041 aaKnown RBP13.54□□□□□ -0.24
FN1-211ENST00000443816 KIAA1107Q9UPP5 1409 aa13.54□□□□□ -0.24
FN1-211ENST00000443816 TTC39AQ5SRH9 613 aa13.54□□□□□ -0.24
FN1-211ENST00000443816 SMC3Q9UQE7 1217 aa13.53□□□□□ -0.24
FN1-211ENST00000443816 CCDC141Q6ZP82 1450 aa13.53□□□□□ -0.24
FN1-211ENST00000443816 RAPGEF3O95398 923 aa13.53□□□□□ -0.24
FN1-211ENST00000443816 MPHOSPH8Q99549 860 aa13.53□□□□□ -0.24
FN1-211ENST00000443816 DAPK1P53355 1430 aa13.53□□□□□ -0.24
FN1-211ENST00000443816 ANKRD30BQ9BXX2 1392 aa13.53□□□□□ -0.24
FN1-211ENST00000443816 ZNF652Q9Y2D9 606 aa13.53□□□□□ -0.24
FN1-211ENST00000443816 TMEM132AQ24JP5 1023 aa13.52□□□□□ -0.24
FN1-211ENST00000443816 CFAP70Q5T0N1 1121 aa13.52□□□□□ -0.24
FN1-211ENST00000443816 CCDC7Q96M83 1385 aa13.52□□□□□ -0.24
FN1-211ENST00000443816 KCNH5Q8NCM2 988 aa13.52□□□□□ -0.24
FN1-211ENST00000443816 KIAA0586Q9BVV6 1533 aa13.52□□□□□ -0.24
FN1-211ENST00000443816 RTN4Q9NQC3 1192 aaKnown RBP13.52□□□□□ -0.25
FN1-211ENST00000443816 BRD4O60885 1362 aaPredicted RBP13.52□□□□□ -0.25
FN1-211ENST00000443816 CT47A1Q5JQC4 288 aaPredicted RBP13.51□□□□□ -0.25
FN1-211ENST00000443816 BICD2Q8TD16 824 aa13.51□□□□□ -0.25
FN1-211ENST00000443816 FOXD4L6Q3SYB3 417 aaPredicted RBP13.51□□□□□ -0.25
FN1-211ENST00000443816 FOXD4L3Q6VB84 417 aaPredicted RBP13.51□□□□□ -0.25
FN1-211ENST00000443816 LRPPRCP42704 1394 aaKnown RBP13.51□□□□□ -0.25
FN1-211ENST00000443816 ATAD2Q6PL18 1390 aa13.51□□□□□ -0.25
FN1-211ENST00000443816 STARD3NLO95772 234 aa13.51□□□□□ -0.25
FN1-211ENST00000443816 CCDC57Q2TAC2 916 aa13.51□□□□□ -0.25
FN1-211ENST00000443816 DDX49Q9Y6V7 483 aaKnown RBP13.51□□□□□ -0.25
FN1-211ENST00000443816 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.51□□□□□ -0.25
FN1-211ENST00000443816 RBM5P52756 815 aaKnown RBP eCLIP13.5□□□□□ -0.251e-19■■□□□ 13
FN1-211ENST00000443816 GNAI2P04899 355 aa13.5□□□□□ -0.25
FN1-211ENST00000443816 ZNF530Q6P9A1 599 aaPredicted RBP13.49□□□□□ -0.25
FN1-211ENST00000443816 FSD1Q9BTV5 496 aa13.49□□□□□ -0.25
FN1-211ENST00000443816 ZSCAN25Q6NSZ9 544 aa13.49□□□□□ -0.25
FN1-211ENST00000443816 TXLNAP40222 546 aa13.49□□□□□ -0.25
FN1-211ENST00000443816 HDGFL1Q5TGJ6 251 aa13.49□□□□□ -0.25
FN1-211ENST00000443816 SLC26A8Q96RN1 970 aa13.49□□□□□ -0.25
FN1-211ENST00000443816 PRKAR2BP31323 418 aa13.48□□□□□ -0.25
FN1-211ENST00000443816 SASS6Q6UVJ0 657 aa13.48□□□□□ -0.25
FN1-211ENST00000443816 CDK5RAP3Q96JB5 506 aa13.48□□□□□ -0.25
FN1-211ENST00000443816 BTBD11A6QL63 1104 aa13.48□□□□□ -0.25
FN1-211ENST00000443816 ADGRL1O94910 1474 aa13.48□□□□□ -0.25
FN1-211ENST00000443816 CCT4P50991 539 aaKnown RBP13.48□□□□□ -0.25
FN1-211ENST00000443816 NACAP1Q9BZK3 213 aa13.48□□□□□ -0.25
FN1-211ENST00000443816 ATP2B2Q01814 1243 aa13.47□□□□□ -0.25
FN1-211ENST00000443816 SULT6B1Q6IMI4 303 aa13.47□□□□□ -0.25
FN1-211ENST00000443816 CABP1Q9NZU7 370 aa13.47□□□□□ -0.25
FN1-211ENST00000443816 WDHD1O75717 1129 aaPredicted RBP13.47□□□□□ -0.25
FN1-211ENST00000443816 MTMR7Q9Y216 660 aa13.47□□□□□ -0.25
FN1-211ENST00000443816 PCF11O94913 1555 aaKnown RBP13.47□□□□□ -0.25
FN1-211ENST00000443816 ZPR1O75312 459 aa13.47□□□□□ -0.25
FN1-211ENST00000443816 SURF6O75683 361 aaKnown RBP13.47□□□□□ -0.25
FN1-211ENST00000443816 OLFM4Q6UX06 510 aa13.47□□□□□ -0.25
FN1-211ENST00000443816 ARHGEF11O15085 1522 aa13.47□□□□□ -0.25
FN1-211ENST00000443816 RDXP35241 583 aaKnown RBP13.47□□□□□ -0.25
FN1-211ENST00000443816 NAT10Q9H0A0 1025 aaKnown RBP13.47□□□□□ -0.25
FN1-211ENST00000443816 CCDC73Q6ZRK6 1079 aa13.47□□□□□ -0.25
FN1-211ENST00000443816 KIF7Q2M1P5 1343 aa13.47□□□□□ -0.25
FN1-211ENST00000443816 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.47□□□□□ -0.25
FN1-211ENST00000443816 CDK13Q14004 1512 aaKnown RBP13.46□□□□□ -0.25
FN1-211ENST00000443816 VPS37CA5D8V6 355 aaPredicted RBP13.46□□□□□ -0.25
FN1-211ENST00000443816 GPS2Q13227 327 aa13.46□□□□□ -0.25
FN1-211ENST00000443816 MYL6BP14649 208 aa13.46□□□□□ -0.25
FN1-211ENST00000443816 NUCB2P80303 420 aa13.46□□□□□ -0.25
FN1-211ENST00000443816 CCAR2Q8N163 923 aaKnown RBP13.46□□□□□ -0.26
FN1-211ENST00000443816 DNAJC2Q99543 621 aaKnown RBP13.46□□□□□ -0.26
FN1-211ENST00000443816 DEKP35659 375 aaKnown RBP13.46□□□□□ -0.26
FN1-211ENST00000443816 LNPKQ9C0E8 428 aa13.46□□□□□ -0.26
FN1-211ENST00000443816 SETD1BQ9UPS6 1966 aaKnown RBP13.45□□□□□ -0.26
FN1-211ENST00000443816 ABCA10Q8WWZ4 1543 aa13.45□□□□□ -0.26
FN1-211ENST00000443816 SLC4A3P48751 1232 aa13.45□□□□□ -0.26
FN1-211ENST00000443816 TWISTNBQ3B726 338 aaPredicted RBP13.45□□□□□ -0.26
FN1-211ENST00000443816 RRP12Q5JTH9 1297 aaKnown RBP13.44□□□□□ -0.26
FN1-211ENST00000443816 ARAP1Q96P48 1450 aa13.44□□□□□ -0.26
FN1-211ENST00000443816 AKNAQ7Z591 1439 aa13.44□□□□□ -0.26
FN1-211ENST00000443816 EXOC6Q8TAG9 804 aa13.44□□□□□ -0.26
FN1-211ENST00000443816 CAMSAP2Q08AD1 1489 aa13.44□□□□□ -0.26
FN1-211ENST00000443816 IGHMBP2P38935 993 aaKnown RBP13.43□□□□□ -0.26
FN1-211ENST00000443816 TMOD2Q9NZR1 351 aa13.43□□□□□ -0.26
FN1-211ENST00000443816 GRIN2AQ12879 1464 aa13.43□□□□□ -0.26
FN1-211ENST00000443816 CDC45O75419 566 aa13.43□□□□□ -0.26
FN1-211ENST00000443816 NAP1L1P55209 391 aaKnown RBP13.43□□□□□ -0.26
FN1-211ENST00000443816 OFD1O75665 1012 aa13.43□□□□□ -0.26
FN1-211ENST00000443816 FOSBP53539 338 aa13.43□□□□□ -0.26
FN1-211ENST00000443816 CCDC61Q9Y6R9 512 aa13.43□□□□□ -0.26
FN1-211ENST00000443816 TEX14Q8IWB6 1497 aa13.43□□□□□ -0.26
FN1-211ENST00000443816 PDCP20941 246 aa13.43□□□□□ -0.26
FN1-211ENST00000443816 CT47B1P0C2W7 299 aaPredicted RBP13.42□□□□□ -0.26
FN1-211ENST00000443816 PDE4AP27815 886 aa13.42□□□□□ -0.26
FN1-211ENST00000443816 TCP11L2Q8N4U5 519 aa13.42□□□□□ -0.26
FN1-211ENST00000443816 TMOD3Q9NYL9 352 aa13.42□□□□□ -0.26
FN1-211ENST00000443816 ZSCAN29Q8IWY8 852 aaPredicted RBP13.42□□□□□ -0.26
FN1-211ENST00000443816 GNAT3A8MTJ3 354 aa13.42□□□□□ -0.26
FN1-211ENST00000443816 MCM2P49736 904 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms