RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 ERC2O15083 957 aa6.05□□□□□ -1.44
HERC1-201ENST00000443617 HTATSF1O43719 755 aaKnown RBP6.05□□□□□ -1.44
HERC1-201ENST00000443617 PAXIP1Q6ZW49 1069 aaPredicted RBP6.05□□□□□ -1.44
HERC1-201ENST00000443617 HMMRO75330 724 aa6.04□□□□□ -1.44
HERC1-201ENST00000443617 PAXBP1Q9Y5B6 917 aa6.04□□□□□ -1.44
HERC1-201ENST00000443617 RAD54L2Q9Y4B4 1467 aa6.04□□□□□ -1.44
HERC1-201ENST00000443617 JARID2Q92833 1246 aaPredicted RBP6.04□□□□□ -1.44
HERC1-201ENST00000443617 WDR33Q9C0J8 1336 aaKnown RBP6.04□□□□□ -1.44
HERC1-201ENST00000443617 CHMP4AQ9BY43 222 aa6.04□□□□□ -1.44
HERC1-201ENST00000443617 NRDCO43847 1150 aa6.04□□□□□ -1.44
HERC1-201ENST00000443617 ZGPATQ8N5A5 531 aaKnown RBP6.04□□□□□ -1.44
HERC1-201ENST00000443617 CWC15Q9P013 229 aaKnown RBP6.04□□□□□ -1.44
HERC1-201ENST00000443617 TRERF1Q96PN7 1200 aa6.04□□□□□ -1.44
HERC1-201ENST00000443617 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.04□□□□□ -1.44
HERC1-201ENST00000443617 RIOK3O14730 519 aaKnown RBP6.04□□□□□ -1.44
HERC1-201ENST00000443617 ZNF710Q8N1W2 664 aa6.04□□□□□ -1.44
HERC1-201ENST00000443617 U2AF2P26368 475 aaKnown RBP eCLIP6.04□□□□□ -1.444e-7■■■■□ 26.7
HERC1-201ENST00000443617 NOL10Q9BSC4 688 aaKnown RBP6.03□□□□□ -1.44
HERC1-201ENST00000443617 TMEM63CQ9P1W3 806 aa6.03□□□□□ -1.44
HERC1-201ENST00000443617 TCOF1Q13428 1488 aaKnown RBP6.03□□□□□ -1.44
HERC1-201ENST00000443617 SMTNL1A8MU46 457 aa6.03□□□□□ -1.44
HERC1-201ENST00000443617 NPHP1O15259 732 aa6.03□□□□□ -1.44
HERC1-201ENST00000443617 API5Q9BZZ5 524 aaKnown RBP6.03□□□□□ -1.44
HERC1-201ENST00000443617 ZMYM4Q5VZL5 1548 aa6.03□□□□□ -1.44
HERC1-201ENST00000443617 CHGAP10645 457 aaKnown RBP6.03□□□□□ -1.44
HERC1-201ENST00000443617 TMEM51Q9NW97 253 aa6.03□□□□□ -1.44
HERC1-201ENST00000443617 KDM4AO75164 1064 aa6.03□□□□□ -1.44
HERC1-201ENST00000443617 KIF2CQ99661 725 aa6.03□□□□□ -1.44
HERC1-201ENST00000443617 GTF2F1P35269 517 aaKnown RBP eCLIP6.02□□□□□ -1.45
HERC1-201ENST00000443617 PLEKHM2Q8IWE5 1019 aa6.02□□□□□ -1.45
HERC1-201ENST00000443617 TNNT1P13805 278 aa6.02□□□□□ -1.45
HERC1-201ENST00000443617 PCF11O94913 1555 aaKnown RBP6.02□□□□□ -1.45
HERC1-201ENST00000443617 IRX5P78411 483 aaPredicted RBP6.02□□□□□ -1.45
HERC1-201ENST00000443617 FKBP5Q13451 457 aaPredicted RBP6.02□□□□□ -1.45
HERC1-201ENST00000443617 PRAG1Q86YV5 1406 aa6.02□□□□□ -1.45
HERC1-201ENST00000443617 HCLS1P14317 486 aaPredicted RBP6.02□□□□□ -1.45
HERC1-201ENST00000443617 PKP1Q13835 747 aa6.02□□□□□ -1.45
HERC1-201ENST00000443617 MX1P20591 662 aa6.02□□□□□ -1.45
HERC1-201ENST00000443617 IL16Q14005 1332 aa6.02□□□□□ -1.45
HERC1-201ENST00000443617 TTC22Q5TAA0 569 aa6.02□□□□□ -1.45
HERC1-201ENST00000443617 CHMP3Q9Y3E7 222 aa6.02□□□□□ -1.45
HERC1-201ENST00000443617 EHBP1L1Q8N3D4 1523 aa6.02□□□□□ -1.45
HERC1-201ENST00000443617 KIF18AQ8NI77 898 aa6.01□□□□□ -1.45
HERC1-201ENST00000443617 TMX3Q96JJ7 454 aa6.01□□□□□ -1.45
HERC1-201ENST00000443617 CHAMP1Q96JM3 812 aa6.01□□□□□ -1.45
HERC1-201ENST00000443617 AK7Q96M32 723 aa6.01□□□□□ -1.45
HERC1-201ENST00000443617 NPC1L1Q9UHC9 1359 aa6.01□□□□□ -1.45
HERC1-201ENST00000443617 ZRSR1Q15695 479 aaKnown RBP6.01□□□□□ -1.45
HERC1-201ENST00000443617 GRIN2BQ13224 1484 aa6.01□□□□□ -1.45
HERC1-201ENST00000443617 UBE2HP62256 183 aa6.01□□□□□ -1.45
HERC1-201ENST00000443617 GOLGA6L1Q8N7Z2 621 aa6.01□□□□□ -1.45
HERC1-201ENST00000443617 C16orf45Q96MC5 204 aaPredicted RBP6.01□□□□□ -1.45
HERC1-201ENST00000443617 DENND4BO75064 1496 aaPredicted RBP6.01□□□□□ -1.45
HERC1-201ENST00000443617 ALDH1L2Q3SY69 923 aa6.01□□□□□ -1.45
HERC1-201ENST00000443617 CEP135Q66GS9 1140 aa6.01□□□□□ -1.45
HERC1-201ENST00000443617 ZDHHC9Q9Y397 364 aa6.01□□□□□ -1.45
HERC1-201ENST00000443617 NOM1Q5C9Z4 860 aaKnown RBP6.01□□□□□ -1.45
HERC1-201ENST00000443617 CARD14Q9BXL6 1004 aa6.01□□□□□ -1.45
HERC1-201ENST00000443617 RNF20Q5VTR2 975 aa6.01□□□□□ -1.45
HERC1-201ENST00000443617 TMPOP42166 694 aaKnown RBP6.01□□□□□ -1.45
HERC1-201ENST00000443617 PTGS1P23219 599 aa6.01□□□□□ -1.45
HERC1-201ENST00000443617 PZPP20742 1482 aa6□□□□□ -1.45
HERC1-201ENST00000443617 APPP05067 770 aa6□□□□□ -1.45
HERC1-201ENST00000443617 CHMP7Q8WUX9 453 aaPredicted RBP6□□□□□ -1.45
HERC1-201ENST00000443617 SMC3Q9UQE7 1217 aa6□□□□□ -1.45
HERC1-201ENST00000443617 ELL2O00472 640 aaPredicted RBP6□□□□□ -1.45
HERC1-201ENST00000443617 GDPD2Q9HCC8 539 aa6□□□□□ -1.45
HERC1-201ENST00000443617 TRIM6-TRIM34B2RNG4 842 aa6□□□□□ -1.45
HERC1-201ENST00000443617 FIBPO43427 364 aa6□□□□□ -1.45
HERC1-201ENST00000443617 TERF2Q15554 542 aa6□□□□□ -1.45
HERC1-201ENST00000443617 ZSCAN21Q9Y5A6 473 aaPredicted RBP6□□□□□ -1.45
HERC1-201ENST00000443617 POLR3GO15318 223 aaPredicted RBP6□□□□□ -1.45
HERC1-201ENST00000443617 ZNF397Q8NF99 534 aaPredicted RBP6□□□□□ -1.45
HERC1-201ENST00000443617 ANKRD7Q92527 254 aa6□□□□□ -1.45
HERC1-201ENST00000443617 ARGLU1Q9NWB6 273 aaPredicted RBP6□□□□□ -1.45
HERC1-201ENST00000443617 KIF2AO00139 706 aaPredicted RBP6□□□□□ -1.45
HERC1-201ENST00000443617 C9orf84Q5VXU9 1444 aa6□□□□□ -1.45
HERC1-201ENST00000443617 NEMFO60524 1076 aa6□□□□□ -1.45
HERC1-201ENST00000443617 SLC12A5Q9H2X9 1139 aa6□□□□□ -1.45
HERC1-201ENST00000443617 DDX41Q9UJV9 622 aaKnown RBP6□□□□□ -1.45
HERC1-201ENST00000443617 GADD45BO75293 160 aaPredicted RBP6□□□□□ -1.45
HERC1-201ENST00000443617 INTS4Q96HW7 963 aaKnown RBP6□□□□□ -1.45
HERC1-201ENST00000443617 ANO2Q9NQ90 1003 aa6□□□□□ -1.45
HERC1-201ENST00000443617 SDSP20132 328 aa5.99□□□□□ -1.45
HERC1-201ENST00000443617 GIMAP6Q6P9H5 292 aa5.99□□□□□ -1.45
HERC1-201ENST00000443617 PIK3C2GO75747 1445 aa5.99□□□□□ -1.45
HERC1-201ENST00000443617 TPM1P09493 284 aa5.99□□□□□ -1.45
HERC1-201ENST00000443617 ARHGAP45Q92619 1136 aa5.99□□□□□ -1.45
HERC1-201ENST00000443617 SCAPERQ9BY12 1400 aa5.99□□□□□ -1.45
HERC1-201ENST00000443617 BMS1Q14692 1282 aaKnown RBP5.99□□□□□ -1.45
HERC1-201ENST00000443617 MAP3K11Q16584 847 aa5.99□□□□□ -1.45
HERC1-201ENST00000443617 TXLNBQ8N3L3 684 aa5.99□□□□□ -1.45
HERC1-201ENST00000443617 ZNF428Q96B54 188 aa5.99□□□□□ -1.45
HERC1-201ENST00000443617 TRIM34Q9BYJ4 488 aa5.99□□□□□ -1.45
HERC1-201ENST00000443617 SMARCA5O60264 1052 aaPredicted RBP5.99□□□□□ -1.45
HERC1-201ENST00000443617 RTF1Q92541 710 aaKnown RBP5.99□□□□□ -1.45
HERC1-201ENST00000443617 PYCARDQ9ULZ3 195 aa5.99□□□□□ -1.45
HERC1-201ENST00000443617 CNPY2Q9Y2B0 182 aa5.99□□□□□ -1.45
HERC1-201ENST00000443617 BRD1O95696 1058 aa5.99□□□□□ -1.45
HERC1-201ENST00000443617 GTF2A1P52655 376 aaPredicted RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms