RNA–Protein interactions for RNA: ENST00000440552.5

PTPRN-205, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-205ENST00000440552 SPATA31A5Q5VU36 1347 aa20.88■□□□□ 0.93
PTPRN-205ENST00000440552 SPATA31A7Q8IWB4 1347 aa20.88■□□□□ 0.93
PTPRN-205ENST00000440552 MINK1Q8N4C8 1332 aaPredicted RBP20.88■□□□□ 0.93
PTPRN-205ENST00000440552 A0A0G2JS52 829 aa20.87■□□□□ 0.93
PTPRN-205ENST00000440552 MYT1Q01538 1121 aa20.87■□□□□ 0.93
PTPRN-205ENST00000440552 CRYBG1Q9Y4K1 1723 aa20.86■□□□□ 0.93
PTPRN-205ENST00000440552 NGDNQ8NEJ9 315 aaKnown RBP20.85■□□□□ 0.93
PTPRN-205ENST00000440552 DCAF11Q8TEB1 546 aa20.84■□□□□ 0.93
PTPRN-205ENST00000440552 RGPD1P0DJD0 1748 aa20.84■□□□□ 0.93
PTPRN-205ENST00000440552 THSD7AQ9UPZ6 1657 aa20.83■□□□□ 0.93
PTPRN-205ENST00000440552 DISP2A7MBM2 1401 aa20.83■□□□□ 0.93
PTPRN-205ENST00000440552 PRDM11Q9NQV5 511 aa20.82■□□□□ 0.92
PTPRN-205ENST00000440552 KDM2AQ9Y2K7 1162 aa20.82■□□□□ 0.92
PTPRN-205ENST00000440552 HRCP23327 699 aa20.81■□□□□ 0.92
PTPRN-205ENST00000440552 ITSN1Q15811 1721 aa20.81■□□□□ 0.92
PTPRN-205ENST00000440552 ATP7BP35670 1465 aa20.81■□□□□ 0.92
PTPRN-205ENST00000440552 PAK3O75914 559 aaPredicted RBP20.8■□□□□ 0.92
PTPRN-205ENST00000440552 PSDA5PKW4 1024 aaPredicted RBP20.79■□□□□ 0.92
PTPRN-205ENST00000440552 NUDT16Q96DE0 195 aaKnown RBP20.79■□□□□ 0.92
PTPRN-205ENST00000440552 SPATA31A1Q5TZJ5 1347 aa20.78■□□□□ 0.92
PTPRN-205ENST00000440552 ARHGEF28Q8N1W1 1705 aaKnown RBP20.78■□□□□ 0.92
PTPRN-205ENST00000440552 KIAA0232Q92628 1395 aa20.78■□□□□ 0.92
PTPRN-205ENST00000440552 EN1Q05925 392 aaPredicted RBP20.78■□□□□ 0.92
PTPRN-205ENST00000440552 FAM182BQ5T319 152 aa20.76■□□□□ 0.91
PTPRN-205ENST00000440552 TNS1Q9HBL0 1735 aaKnown RBP20.75■□□□□ 0.91
PTPRN-205ENST00000440552 POLR3AO14802 1390 aaPredicted RBP20.75■□□□□ 0.91
PTPRN-205ENST00000440552 PHRF1Q9P1Y6 1649 aaKnown RBP20.75■□□□□ 0.91
PTPRN-205ENST00000440552 FAM196AQ6ZSG2 479 aa20.74■□□□□ 0.91
PTPRN-205ENST00000440552 CDK19Q9BWU1 502 aa20.73■□□□□ 0.91
PTPRN-205ENST00000440552 PARD3Q8TEW0 1356 aa20.72■□□□□ 0.91
PTPRN-205ENST00000440552 PLEKHG3A1L390 1219 aa20.72■□□□□ 0.91
PTPRN-205ENST00000440552 CHRNA2Q15822 529 aa20.72■□□□□ 0.91
PTPRN-205ENST00000440552 CCDC61Q9Y6R9 512 aa20.72■□□□□ 0.91
PTPRN-205ENST00000440552 TOPAZ1Q8N9V7 1692 aa20.71■□□□□ 0.91
PTPRN-205ENST00000440552 R3HDM1Q15032 1099 aaKnown RBP20.71■□□□□ 0.91
PTPRN-205ENST00000440552 NBPF8Q3BBV2 869 aa20.71■□□□□ 0.91
PTPRN-205ENST00000440552 BARGINQ6ZT62 677 aa20.71■□□□□ 0.91
PTPRN-205ENST00000440552 CAMKK2Q96RR4 588 aa20.71■□□□□ 0.91
PTPRN-205ENST00000440552 ACEP12821 1306 aa20.71■□□□□ 0.91
PTPRN-205ENST00000440552 ZC3H6P61129 1189 aaKnown RBP20.7■□□□□ 0.9
PTPRN-205ENST00000440552 EZH2Q15910 746 aaKnown RBP20.7■□□□□ 0.9
PTPRN-205ENST00000440552 STRN4Q9NRL3 753 aa20.7■□□□□ 0.9
PTPRN-205ENST00000440552 SSH2Q76I76 1423 aa20.7■□□□□ 0.9
PTPRN-205ENST00000440552 KIAA1210Q9ULL0 1709 aa20.69■□□□□ 0.9
PTPRN-205ENST00000440552 CPDO75976 1380 aa20.69■□□□□ 0.9
PTPRN-205ENST00000440552 TRIM37O94972 964 aa20.68■□□□□ 0.9
PTPRN-205ENST00000440552 EVA1CP58658 441 aa20.67■□□□□ 0.9
PTPRN-205ENST00000440552 NUTM2GQ5VZR2 741 aa20.67■□□□□ 0.9
PTPRN-205ENST00000440552 USP19O94966 1318 aa20.67■□□□□ 0.9
PTPRN-205ENST00000440552 NRKQ7Z2Y5 1582 aa20.66■□□□□ 0.9
PTPRN-205ENST00000440552 CAMTA1Q9Y6Y1 1673 aa20.66■□□□□ 0.9
PTPRN-205ENST00000440552 APBA3O96018 575 aa20.65■□□□□ 0.9
PTPRN-205ENST00000440552 PDE3BQ13370 1112 aa20.65■□□□□ 0.9
PTPRN-205ENST00000440552 ABTB2Q8N961 1025 aa20.65■□□□□ 0.9
PTPRN-205ENST00000440552 LMO7Q8WWI1 1683 aa20.64■□□□□ 0.9
PTPRN-205ENST00000440552 BRD4O60885 1362 aaPredicted RBP20.64■□□□□ 0.89
PTPRN-205ENST00000440552 TCP11L2Q8N4U5 519 aa20.64■□□□□ 0.89
PTPRN-205ENST00000440552 THRAP3Q9Y2W1 955 aaKnown RBP20.64■□□□□ 0.89
PTPRN-205ENST00000440552 LARP1Q6PKG0 1096 aaKnown RBP20.63■□□□□ 0.89
PTPRN-205ENST00000440552 USP35Q9P2H5 1018 aa20.63■□□□□ 0.89
PTPRN-205ENST00000440552 NLRP13Q86W25 1043 aa20.62■□□□□ 0.89
PTPRN-205ENST00000440552 RREB1Q92766 1687 aa20.61■□□□□ 0.89
PTPRN-205ENST00000440552 C11orf95C9JLR9 678 aaPredicted RBP20.61■□□□□ 0.89
PTPRN-205ENST00000440552 GCP02774 474 aa20.6■□□□□ 0.89
PTPRN-205ENST00000440552 NBPF1Q3BBV0 1214 aa20.59■□□□□ 0.89
PTPRN-205ENST00000440552 PPIP5K1Q6PFW1 1433 aa20.59■□□□□ 0.89
PTPRN-205ENST00000440552 CENPJQ9HC77 1338 aaPredicted RBP20.57■□□□□ 0.88
PTPRN-205ENST00000440552 COL5A2P05997 1499 aaPredicted RBP20.57■□□□□ 0.88
PTPRN-205ENST00000440552 SRPK2P78362 688 aaKnown RBP20.57■□□□□ 0.88
PTPRN-205ENST00000440552 NUP188Q5SRE5 1749 aa20.57■□□□□ 0.88
PTPRN-205ENST00000440552 NBPF14Q5TI25 921 aa20.57■□□□□ 0.88
PTPRN-205ENST00000440552 PARP4Q9UKK3 1724 aaKnown RBP20.57■□□□□ 0.88
PTPRN-205ENST00000440552 CRB1P82279 1406 aa20.55■□□□□ 0.88
PTPRN-205ENST00000440552 AATKQ6ZMQ8 1374 aa20.54■□□□□ 0.88
PTPRN-205ENST00000440552 CABP2Q9NPB3 220 aa20.53■□□□□ 0.88
PTPRN-205ENST00000440552 SLIT3O75094 1523 aa20.53■□□□□ 0.88
PTPRN-205ENST00000440552 USP6P35125 1406 aa20.53■□□□□ 0.88
PTPRN-205ENST00000440552 OVOS2A0A0G2JMS6 1433 aa20.52■□□□□ 0.87
PTPRN-205ENST00000440552 OVOS2A0A0J9YW53 1432 aa20.52■□□□□ 0.87
PTPRN-205ENST00000440552 OVOS2Q6IE36 1432 aa20.52■□□□□ 0.87
PTPRN-205ENST00000440552 PEAK1Q9H792 1746 aa20.51■□□□□ 0.87
PTPRN-205ENST00000440552 NLRP6P59044 892 aa20.5■□□□□ 0.87
PTPRN-205ENST00000440552 CABP1Q9NZU7 370 aa20.5■□□□□ 0.87
PTPRN-205ENST00000440552 RGPD3A6NKT7 1758 aaPredicted RBP20.49■□□□□ 0.87
PTPRN-205ENST00000440552 RGPD4Q7Z3J3 1758 aa20.49■□□□□ 0.87
PTPRN-205ENST00000440552 QRICH2Q9H0J4 1663 aa20.49■□□□□ 0.87
PTPRN-205ENST00000440552 PLSCR1O15162 318 aa20.48■□□□□ 0.87
PTPRN-205ENST00000440552 SPON1Q9HCB6 807 aa20.48■□□□□ 0.87
PTPRN-205ENST00000440552 COL18A1P39060 1754 aa20.47■□□□□ 0.87
PTPRN-205ENST00000440552 SBF2Q86WG5 1849 aa20.46■□□□□ 0.87
PTPRN-205ENST00000440552 LRRC37A3O60309 1634 aa20.46■□□□□ 0.87
PTPRN-205ENST00000440552 KCNQ2O43526 872 aa20.46■□□□□ 0.87
PTPRN-205ENST00000440552 DDB1Q16531 1140 aa20.46■□□□□ 0.87
PTPRN-205ENST00000440552 CDCA7Q9BWT1 371 aaPredicted RBP20.46■□□□□ 0.87
PTPRN-205ENST00000440552 BCL9O00512 1426 aa20.45■□□□□ 0.86
PTPRN-205ENST00000440552 TOM1L2Q6ZVM7 507 aa20.45■□□□□ 0.86
PTPRN-205ENST00000440552 WDR17Q8IZU2 1322 aa20.45■□□□□ 0.86
PTPRN-205ENST00000440552 PIK3C2AO00443 1686 aa20.45■□□□□ 0.86
PTPRN-205ENST00000440552 BCL11BQ9C0K0 894 aaPredicted RBP20.44■□□□□ 0.86
PTPRN-205ENST00000440552 EVC2Q86UK5 1308 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms