RNA–Protein interactions for RNA: ENST00000438661.2

KCNC4-204, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNC4, Length 2,953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-204ENST00000438661 RBSNQ9H1K0 784 aa22.47■■□□□ 1.19
KCNC4-204ENST00000438661 PTMSP20962 102 aa22.46■■□□□ 1.19
KCNC4-204ENST00000438661 TRAK1Q9UPV9 953 aa22.46■■□□□ 1.19
KCNC4-204ENST00000438661 SLC12A5Q9H2X9 1139 aa22.46■■□□□ 1.19
KCNC4-204ENST00000438661 KIF2CQ99661 725 aa22.45■■□□□ 1.18
KCNC4-204ENST00000438661 DEPDC5O75140 1603 aa22.45■■□□□ 1.18
KCNC4-204ENST00000438661 SLC24A1O60721 1099 aa22.44■■□□□ 1.18
KCNC4-204ENST00000438661 ABCA6Q8N139 1617 aa22.44■■□□□ 1.18
KCNC4-204ENST00000438661 ZSCAN23Q3MJ62 389 aa22.44■■□□□ 1.18
KCNC4-204ENST00000438661 WDR63Q8IWG1 891 aa22.44■■□□□ 1.18
KCNC4-204ENST00000438661 RBM27Q9P2N5 1060 aaKnown RBP22.44■■□□□ 1.18
KCNC4-204ENST00000438661 NOL7Q9UMY1 257 aaKnown RBP22.44■■□□□ 1.18
KCNC4-204ENST00000438661 MAP3K4Q9Y6R4 1608 aa22.43■■□□□ 1.18
KCNC4-204ENST00000438661 PRIM1P49642 420 aaKnown RBP22.43■■□□□ 1.18
KCNC4-204ENST00000438661 EXOSC9Q06265 439 aaKnown RBP22.43■■□□□ 1.18
KCNC4-204ENST00000438661 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.43■■□□□ 1.18
KCNC4-204ENST00000438661 POLR3AO14802 1390 aaPredicted RBP22.43■■□□□ 1.18
KCNC4-204ENST00000438661 HDAC1Q13547 482 aaPredicted RBP22.43■■□□□ 1.18
KCNC4-204ENST00000438661 MPNDQ8N594 471 aa22.43■■□□□ 1.18
KCNC4-204ENST00000438661 TMEM57Q8N5G2 664 aa22.42■■□□□ 1.18
KCNC4-204ENST00000438661 NOB1Q9ULX3 412 aaKnown RBP22.42■■□□□ 1.18
KCNC4-204ENST00000438661 DDX19BQ9UMR2 479 aa22.42■■□□□ 1.18
KCNC4-204ENST00000438661 KIAA1210Q9ULL0 1709 aa22.42■■□□□ 1.18
KCNC4-204ENST00000438661 ATP7AQ04656 1500 aa22.42■■□□□ 1.18
KCNC4-204ENST00000438661 U2AF1L5P0DN76 240 aaPredicted RBP22.42■■□□□ 1.18
KCNC4-204ENST00000438661 U2AF1Q01081 240 aaKnown RBP eCLIP22.42■■□□□ 1.18
KCNC4-204ENST00000438661 ANKRD45Q5TZF3 282 aa22.42■■□□□ 1.18
KCNC4-204ENST00000438661 JARID2Q92833 1246 aaPredicted RBP22.42■■□□□ 1.18
KCNC4-204ENST00000438661 SSH1Q8WYL5 1049 aa22.41■■□□□ 1.18
KCNC4-204ENST00000438661 NSD3Q9BZ95 1437 aa22.41■■□□□ 1.18
KCNC4-204ENST00000438661 MTHFSP49914 203 aa22.41■■□□□ 1.18
KCNC4-204ENST00000438661 RNF214Q8ND24 703 aa22.41■■□□□ 1.18
KCNC4-204ENST00000438661 UHRF1BP1LA0JNW5 1464 aa22.41■■□□□ 1.18
KCNC4-204ENST00000438661 AK9Q5TCS8 1911 aa22.41■■□□□ 1.18
KCNC4-204ENST00000438661 TERF1P54274 439 aa22.4■■□□□ 1.18
KCNC4-204ENST00000438661 TMEM132EQ6IEE7 984 aa22.4■■□□□ 1.18
KCNC4-204ENST00000438661 CHAMP1Q96JM3 812 aa22.4■■□□□ 1.18
KCNC4-204ENST00000438661 PKP1Q13835 747 aa22.4■■□□□ 1.18
KCNC4-204ENST00000438661 DNTTIP2Q5QJE6 756 aaKnown RBP22.4■■□□□ 1.18
KCNC4-204ENST00000438661 FANCAO15360 1455 aa22.39■■□□□ 1.18
KCNC4-204ENST00000438661 PRPF40AO75400 957 aaKnown RBP22.39■■□□□ 1.18
KCNC4-204ENST00000438661 FOXD4L5Q5VV16 416 aaPredicted RBP22.39■■□□□ 1.18
KCNC4-204ENST00000438661 FOXD4L4Q8WXT5 416 aaPredicted RBP22.39■■□□□ 1.18
KCNC4-204ENST00000438661 TSC1Q92574 1164 aa22.39■■□□□ 1.18
KCNC4-204ENST00000438661 VWDEQ8N2E2 1590 aa22.39■■□□□ 1.18
KCNC4-204ENST00000438661 CHD1LQ86WJ1 897 aa22.39■■□□□ 1.17
KCNC4-204ENST00000438661 MYOM2P54296 1465 aa22.38■■□□□ 1.17
KCNC4-204ENST00000438661 ATF7IPQ6VMQ6 1270 aa22.38■■□□□ 1.17
KCNC4-204ENST00000438661 ZNF500O60304 480 aaPredicted RBP22.38■■□□□ 1.17
KCNC4-204ENST00000438661 NOS1P29475 1434 aa22.37■■□□□ 1.17
KCNC4-204ENST00000438661 NUCB1Q02818 461 aa22.37■■□□□ 1.17
KCNC4-204ENST00000438661 TBC1D9Q6ZT07 1266 aa22.37■■□□□ 1.17
KCNC4-204ENST00000438661 SMAP1Q8IYB5 467 aaPredicted RBP22.37■■□□□ 1.17
KCNC4-204ENST00000438661 C1orf115Q9H7X2 142 aa22.37■■□□□ 1.17
KCNC4-204ENST00000438661 ZKSCAN5Q9Y2L8 839 aa22.37■■□□□ 1.17
KCNC4-204ENST00000438661 PTMAP06454 111 aaKnown RBP22.36■■□□□ 1.17
KCNC4-204ENST00000438661 DYNC1I1O14576 645 aa22.35■■□□□ 1.17
KCNC4-204ENST00000438661 ZNF445P59923 1031 aa22.35■■□□□ 1.17
KCNC4-204ENST00000438661 INO80Q9ULG1 1556 aaPredicted RBP22.34■■□□□ 1.17
KCNC4-204ENST00000438661 ADGRL1O94910 1474 aa22.34■■□□□ 1.17
KCNC4-204ENST00000438661 SYCE3A1L190 88 aa22.34■■□□□ 1.17
KCNC4-204ENST00000438661 KIF1BO60333 1816 aa22.34■■□□□ 1.17
KCNC4-204ENST00000438661 LMBRD1Q9NUN5 540 aa22.33■■□□□ 1.17
KCNC4-204ENST00000438661 MROH1Q8NDA8 1641 aa22.33■■□□□ 1.17
KCNC4-204ENST00000438661 ZBTB40Q9NUA8 1239 aa22.33■■□□□ 1.16
KCNC4-204ENST00000438661 FAM177BA6PVY3 158 aa22.32■■□□□ 1.16
KCNC4-204ENST00000438661 CSPP1Q1MSJ5 1256 aa22.32■■□□□ 1.16
KCNC4-204ENST00000438661 PHF23Q9BUL5 403 aaPredicted RBP22.32■■□□□ 1.16
KCNC4-204ENST00000438661 MROH2AA6NES4 1674 aa22.32■■□□□ 1.16
KCNC4-204ENST00000438661 ARAP3Q8WWN8 1544 aa22.32■■□□□ 1.16
KCNC4-204ENST00000438661 U2SURPO15042 1029 aaKnown RBP22.32■■□□□ 1.16
KCNC4-204ENST00000438661 HS1BP3Q53T59 392 aa22.32■■□□□ 1.16
KCNC4-204ENST00000438661 NUTM2DQ5VT03 806 aaPredicted RBP22.32■■□□□ 1.16
KCNC4-204ENST00000438661 SASS6Q6UVJ0 657 aa22.32■■□□□ 1.16
KCNC4-204ENST00000438661 SBNO2Q9Y2G9 1366 aa22.31■■□□□ 1.16
KCNC4-204ENST00000438661 CBX1P83916 185 aa22.31■■□□□ 1.16
KCNC4-204ENST00000438661 BMP2KLQ5H9B9 411 aa22.31■■□□□ 1.16
KCNC4-204ENST00000438661 CFAP53Q96M91 514 aa22.31■■□□□ 1.16
KCNC4-204ENST00000438661 SHPRHQ149N8 1683 aa22.3■■□□□ 1.16
KCNC4-204ENST00000438661 PDLIM2Q96JY6 352 aa22.3■■□□□ 1.16
KCNC4-204ENST00000438661 KIF16BQ96L93 1317 aa22.3■■□□□ 1.16
KCNC4-204ENST00000438661 MTERF4Q7Z6M4 381 aaKnown RBP22.3■■□□□ 1.16
KCNC4-204ENST00000438661 NEURL4Q96JN8 1562 aa22.29■■□□□ 1.16
KCNC4-204ENST00000438661 GPT2Q8TD30 523 aa22.29■■□□□ 1.16
KCNC4-204ENST00000438661 C14orf93Q9H972 538 aaKnown RBP22.29■■□□□ 1.16
KCNC4-204ENST00000438661 CFAP65Q6ZU64 1925 aaKnown RBP22.29■■□□□ 1.16
KCNC4-204ENST00000438661 TPRNQ4KMQ1 711 aa22.29■■□□□ 1.16
KCNC4-204ENST00000438661 GGT6Q6P531 493 aa22.29■■□□□ 1.16
KCNC4-204ENST00000438661 SENP3Q9H4L4 574 aaPredicted RBP22.29■■□□□ 1.16
KCNC4-204ENST00000438661 EFCAB6Q5THR3 1501 aa22.28■■□□□ 1.16
KCNC4-204ENST00000438661 IBTKQ9P2D0 1353 aaPredicted RBP22.28■■□□□ 1.16
KCNC4-204ENST00000438661 NRXN1Q9ULB1 1477 aa22.28■■□□□ 1.16
KCNC4-204ENST00000438661 IFT172Q9UG01 1749 aa22.27■■□□□ 1.16
KCNC4-204ENST00000438661 ZGPATQ8N5A5 531 aaKnown RBP22.27■■□□□ 1.16
KCNC4-204ENST00000438661 CCDC39Q9UFE4 941 aa22.27■■□□□ 1.16
KCNC4-204ENST00000438661 NSFL1CQ9UNZ2 370 aaKnown RBP22.27■■□□□ 1.16
KCNC4-204ENST00000438661 CCDC94Q9BW85 323 aaPredicted RBP22.26■■□□□ 1.15
KCNC4-204ENST00000438661 PPRC1Q5VV67 1664 aaKnown RBP22.26■■□□□ 1.15
KCNC4-204ENST00000438661 ABCA9Q8IUA7 1624 aa22.26■■□□□ 1.15
KCNC4-204ENST00000438661 NUCB2P80303 420 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms