RNA–Protein interactions for RNA: ENST00000432289.5

CCDC196-204, Transcript of coiled-coil domain containing 196, humanhuman

TSL 3

Gene CCDC196, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-204ENST00000432289 CEP164Q9UPV0 1460 aa11.7□□□□□ -0.54
CCDC196-204ENST00000432289 CCNYL3P0C7X3 344 aa11.7□□□□□ -0.54
CCDC196-204ENST00000432289 SNIP1Q8TAD8 396 aaKnown RBP11.7□□□□□ -0.54
CCDC196-204ENST00000432289 MRGPRX2Q96LB1 330 aa11.7□□□□□ -0.54
CCDC196-204ENST00000432289 PCDHB15Q9Y5E8 787 aa11.69□□□□□ -0.54
CCDC196-204ENST00000432289 CUX1P39880 1505 aa11.69□□□□□ -0.54
CCDC196-204ENST00000432289 RC3H1Q5TC82 1133 aaKnown RBP11.68□□□□□ -0.54
CCDC196-204ENST00000432289 EVA1BQ9NVM1 165 aa11.68□□□□□ -0.54
CCDC196-204ENST00000432289 DNMBPQ6XZF7 1577 aa11.67□□□□□ -0.54
CCDC196-204ENST00000432289 TTC24A2A3L6 582 aaPredicted RBP11.67□□□□□ -0.54
CCDC196-204ENST00000432289 ST8SIA5O15466 376 aa11.67□□□□□ -0.54
CCDC196-204ENST00000432289 RIC3Q7Z5B4 369 aa11.67□□□□□ -0.54
CCDC196-204ENST00000432289 BCANQ96GW7 911 aa11.67□□□□□ -0.54
CCDC196-204ENST00000432289 SLC24A1O60721 1099 aa11.66□□□□□ -0.54
CCDC196-204ENST00000432289 SMPD1P17405 629 aa11.66□□□□□ -0.54
CCDC196-204ENST00000432289 PRPF38BQ5VTL8 546 aaKnown RBP11.66□□□□□ -0.54
CCDC196-204ENST00000432289 HRCP23327 699 aa11.65□□□□□ -0.54
CCDC196-204ENST00000432289 SMCPP49901 116 aaPredicted RBP11.65□□□□□ -0.54
CCDC196-204ENST00000432289 CTC1Q2NKJ3 1217 aa11.65□□□□□ -0.54
CCDC196-204ENST00000432289 MYSM1Q5VVJ2 828 aa11.65□□□□□ -0.54
CCDC196-204ENST00000432289 EEA1Q15075 1411 aa11.64□□□□□ -0.55
CCDC196-204ENST00000432289 TUSC1Q2TAM9 212 aa11.64□□□□□ -0.55
CCDC196-204ENST00000432289 ZBTB3Q9H5J0 574 aa11.64□□□□□ -0.55
CCDC196-204ENST00000432289 POTECB2RU33 542 aa11.63□□□□□ -0.55
CCDC196-204ENST00000432289 CFAP99D6REC4 459 aa11.63□□□□□ -0.55
CCDC196-204ENST00000432289 KCNH2Q12809 1159 aa11.63□□□□□ -0.55
CCDC196-204ENST00000432289 LYPD8Q6UX82 237 aa11.63□□□□□ -0.55
CCDC196-204ENST00000432289 J3QL48 77 aa11.62□□□□□ -0.55
CCDC196-204ENST00000432289 UNC93B1Q9H1C4 597 aa11.62□□□□□ -0.55
CCDC196-204ENST00000432289 LIMD1Q9UGP4 676 aa11.62□□□□□ -0.55
CCDC196-204ENST00000432289 TOPBP1Q92547 1522 aa11.6□□□□□ -0.55
CCDC196-204ENST00000432289 AXIN1O15169 862 aa11.6□□□□□ -0.55
CCDC196-204ENST00000432289 SIAH2O43255 324 aa11.6□□□□□ -0.55
CCDC196-204ENST00000432289 SH3BP2P78314 561 aa11.6□□□□□ -0.55
CCDC196-204ENST00000432289 CABLES1Q8TDN4 633 aa11.59□□□□□ -0.55
CCDC196-204ENST00000432289 DACH1Q9UI36 760 aa11.59□□□□□ -0.55
CCDC196-204ENST00000432289 ERCC6Q03468 1493 aa11.58□□□□□ -0.56
CCDC196-204ENST00000432289 FGD5Q6ZNL6 1462 aa11.58□□□□□ -0.56
CCDC196-204ENST00000432289 FAM9AQ8IZU1 332 aaPredicted RBP11.58□□□□□ -0.56
CCDC196-204ENST00000432289 URB2Q14146 1524 aaKnown RBP11.58□□□□□ -0.56
CCDC196-204ENST00000432289 MRC2Q9UBG0 1479 aa11.57□□□□□ -0.56
CCDC196-204ENST00000432289 LILRB3O75022 631 aa11.57□□□□□ -0.56
CCDC196-204ENST00000432289 QPCTQ16769 361 aa11.57□□□□□ -0.56
CCDC196-204ENST00000432289 EHBP1Q8NDI1 1231 aa11.57□□□□□ -0.56
CCDC196-204ENST00000432289 BAP1Q92560 729 aa11.57□□□□□ -0.56
CCDC196-204ENST00000432289 F12P00748 615 aaPredicted RBP11.56□□□□□ -0.56
CCDC196-204ENST00000432289 CSPP1Q1MSJ5 1256 aa11.56□□□□□ -0.56
CCDC196-204ENST00000432289 HPS1Q92902 700 aa11.56□□□□□ -0.56
CCDC196-204ENST00000432289 RSPH6AQ9H0K4 717 aa11.56□□□□□ -0.56
CCDC196-204ENST00000432289 SOGA1O94964 1423 aa11.55□□□□□ -0.56
CCDC196-204ENST00000432289 ZNF511Q8NB15 262 aa11.55□□□□□ -0.56
CCDC196-204ENST00000432289 ZNF775Q96BV0 537 aaPredicted RBP11.55□□□□□ -0.56
CCDC196-204ENST00000432289 WDR97A6NE52 1622 aa11.53□□□□□ -0.56
CCDC196-204ENST00000432289 ALDH1A1P00352 501 aa11.53□□□□□ -0.56
CCDC196-204ENST00000432289 CLK2P49760 499 aaKnown RBP11.53□□□□□ -0.56
CCDC196-204ENST00000432289 LINC01559Q495D7 138 aa11.53□□□□□ -0.56
CCDC196-204ENST00000432289 KIF27Q86VH2 1401 aa11.52□□□□□ -0.56
CCDC196-204ENST00000432289 POLA1P09884 1462 aaPredicted RBP11.52□□□□□ -0.56
CCDC196-204ENST00000432289 WDR62O43379 1518 aa11.52□□□□□ -0.57
CCDC196-204ENST00000432289 PER1O15534 1290 aaPredicted RBP11.52□□□□□ -0.57
CCDC196-204ENST00000432289 MAP10Q9P2G4 905 aa11.52□□□□□ -0.57
CCDC196-204ENST00000432289 THOC2Q8NI27 1593 aaKnown RBP11.52□□□□□ -0.57
CCDC196-204ENST00000432289 KIF21BO75037 1637 aa11.51□□□□□ -0.57
CCDC196-204ENST00000432289 NUTM2BA6NNL0 878 aaPredicted RBP11.51□□□□□ -0.57
CCDC196-204ENST00000432289 NUTM2EB1AL46 878 aaPredicted RBP11.51□□□□□ -0.57
CCDC196-204ENST00000432289 CTHP32929 405 aa11.51□□□□□ -0.57
CCDC196-204ENST00000432289 NUTM2DQ5VT03 806 aaPredicted RBP11.51□□□□□ -0.57
CCDC196-204ENST00000432289 NUTM2AQ8IVF1 878 aaPredicted RBP11.51□□□□□ -0.57
CCDC196-204ENST00000432289 RUSC2Q8N2Y8 1516 aa11.5□□□□□ -0.57
CCDC196-204ENST00000432289 VARSP26640 1264 aaKnown RBP11.5□□□□□ -0.57
CCDC196-204ENST00000432289 RTL5Q5HYW3 569 aaPredicted RBP11.5□□□□□ -0.57
CCDC196-204ENST00000432289 MPNDQ8N594 471 aa11.5□□□□□ -0.57
CCDC196-204ENST00000432289 KDM4CQ9H3R0 1056 aa11.5□□□□□ -0.57
CCDC196-204ENST00000432289 GPBP1L1Q9HC44 474 aaPredicted RBP11.5□□□□□ -0.57
CCDC196-204ENST00000432289 GMPR2Q9P2T1 348 aaKnown RBP11.5□□□□□ -0.57
CCDC196-204ENST00000432289 POLR3EQ9NVU0 708 aa11.49□□□□□ -0.57
CCDC196-204ENST00000432289 CUX2O14529 1486 aa11.49□□□□□ -0.57
CCDC196-204ENST00000432289 ABCA10Q8WWZ4 1543 aa11.49□□□□□ -0.57
CCDC196-204ENST00000432289 ATP13A2Q9NQ11 1180 aa11.48□□□□□ -0.57
CCDC196-204ENST00000432289 TARBP1Q13395 1621 aaKnown RBP11.46□□□□□ -0.57
CCDC196-204ENST00000432289 RAD54L2Q9Y4B4 1467 aa11.46□□□□□ -0.57
CCDC196-204ENST00000432289 SKIV2LQ15477 1246 aaKnown RBP11.46□□□□□ -0.57
CCDC196-204ENST00000432289 HELBQ8NG08 1087 aaPredicted RBP11.46□□□□□ -0.57
CCDC196-204ENST00000432289 TSC1Q92574 1164 aa11.46□□□□□ -0.57
CCDC196-204ENST00000432289 DDRGK1Q96HY6 314 aa11.46□□□□□ -0.57
CCDC196-204ENST00000432289 FAM117AQ9C073 453 aa11.46□□□□□ -0.57
CCDC196-204ENST00000432289 LOC105371045A0A1W2PR82 267 aa11.45□□□□□ -0.58
CCDC196-204ENST00000432289 C11orf95C9JLR9 678 aaPredicted RBP11.45□□□□□ -0.58
CCDC196-204ENST00000432289 SH3D19Q5HYK7 790 aa11.45□□□□□ -0.58
CCDC196-204ENST00000432289 TLL2Q9Y6L7 1015 aa11.45□□□□□ -0.58
CCDC196-204ENST00000432289 WASF2Q9Y6W5 498 aa11.45□□□□□ -0.58
CCDC196-204ENST00000432289 GOLGA3Q08378 1498 aa11.44□□□□□ -0.58
CCDC196-204ENST00000432289 CUL7Q14999 1698 aa11.44□□□□□ -0.58
CCDC196-204ENST00000432289 PBRM1Q86U86 1689 aa11.44□□□□□ -0.58
CCDC196-204ENST00000432289 ABCA5Q8WWZ7 1642 aa11.44□□□□□ -0.58
CCDC196-204ENST00000432289 ERICH3Q5RHP9 1530 aa11.44□□□□□ -0.58
CCDC196-204ENST00000432289 PLEKHG3A1L390 1219 aa11.43□□□□□ -0.58
CCDC196-204ENST00000432289 FOXJ1Q92949 421 aa11.43□□□□□ -0.58
CCDC196-204ENST00000432289 TRIM47Q96LD4 638 aa11.42□□□□□ -0.58
CCDC196-204ENST00000432289 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms