RNA–Protein interactions for RNA: ENST00000429553.5

SH2D3C-206, Transcript of SH2 domain containing 3C, humanhuman

TSL 1 (best) BASIC

Gene SH2D3C, Length 2,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3C-206ENST00000429553 SPDYE4A6NLX3 237 aa18.73■□□□□ 0.59
SH2D3C-206ENST00000429553 K7ELQ4 463 aaPredicted RBP18.73■□□□□ 0.59
SH2D3C-206ENST00000429553 MYRIPQ8NFW9 859 aa18.73■□□□□ 0.59
SH2D3C-206ENST00000429553 CCDC144AA2RUR9 1427 aa18.73■□□□□ 0.59
SH2D3C-206ENST00000429553 ZBTB22O15209 634 aa18.73■□□□□ 0.59
SH2D3C-206ENST00000429553 MPNDQ8N594 471 aa18.73■□□□□ 0.59
SH2D3C-206ENST00000429553 NPM1P06748 294 aaKnown RBP eCLIP18.72■□□□□ 0.59
SH2D3C-206ENST00000429553 MCM5P33992 734 aa18.72■□□□□ 0.59
SH2D3C-206ENST00000429553 LETM1O95202 739 aaPredicted RBP18.71■□□□□ 0.59
SH2D3C-206ENST00000429553 MVPQ14764 893 aaKnown RBP18.71■□□□□ 0.59
SH2D3C-206ENST00000429553 LMBRD1Q9NUN5 540 aa18.71■□□□□ 0.59
SH2D3C-206ENST00000429553 CCDC39Q9UFE4 941 aa18.71■□□□□ 0.59
SH2D3C-206ENST00000429553 PIK3C2GO75747 1445 aa18.71■□□□□ 0.59
SH2D3C-206ENST00000429553 UNC13BO14795 1591 aa18.71■□□□□ 0.59
SH2D3C-206ENST00000429553 CLEC17AQ6ZS10 378 aa18.7■□□□□ 0.58
SH2D3C-206ENST00000429553 RNF214Q8ND24 703 aa18.7■□□□□ 0.58
SH2D3C-206ENST00000429553 DUOX2Q9NRD8 1548 aa18.7■□□□□ 0.58
SH2D3C-206ENST00000429553 PKP1Q13835 747 aa18.69■□□□□ 0.58
SH2D3C-206ENST00000429553 PRDM15P57071 1507 aaPredicted RBP18.69■□□□□ 0.58
SH2D3C-206ENST00000429553 ZFYVE16Q7Z3T8 1539 aa18.68■□□□□ 0.58
SH2D3C-206ENST00000429553 PLCD3Q8N3E9 789 aa18.68■□□□□ 0.58
SH2D3C-206ENST00000429553 AFAP1Q8N556 730 aa18.68■□□□□ 0.58
SH2D3C-206ENST00000429553 CHAMP1Q96JM3 812 aa18.68■□□□□ 0.58
SH2D3C-206ENST00000429553 ZNF830Q96NB3 372 aaPredicted RBP18.68■□□□□ 0.58
SH2D3C-206ENST00000429553 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.67■□□□□ 0.58
SH2D3C-206ENST00000429553 SYCE3A1L190 88 aa18.67■□□□□ 0.58
SH2D3C-206ENST00000429553 PRPF40AO75400 957 aaKnown RBP18.67■□□□□ 0.58
SH2D3C-206ENST00000429553 PTMAP06454 111 aaKnown RBP18.67■□□□□ 0.58
SH2D3C-206ENST00000429553 FTSJ3Q8IY81 847 aaKnown RBP18.67■□□□□ 0.58
SH2D3C-206ENST00000429553 GPT2Q8TD30 523 aa18.67■□□□□ 0.58
SH2D3C-206ENST00000429553 LNPKQ9C0E8 428 aa18.67■□□□□ 0.58
SH2D3C-206ENST00000429553 KIAA2012Q0VF49 1180 aa18.66■□□□□ 0.58
SH2D3C-206ENST00000429553 CGNQ9P2M7 1197 aaKnown RBP18.66■□□□□ 0.58
SH2D3C-206ENST00000429553 ADGRL1O94910 1474 aa18.66■□□□□ 0.58
SH2D3C-206ENST00000429553 C17orf53Q8N3J3 647 aaPredicted RBP18.65■□□□□ 0.58
SH2D3C-206ENST00000429553 IPO4Q8TEX9 1081 aaKnown RBP18.65■□□□□ 0.58
SH2D3C-206ENST00000429553 SPAG9O60271 1321 aaKnown RBP18.65■□□□□ 0.58
SH2D3C-206ENST00000429553 A2MP01023 1474 aa18.65■□□□□ 0.58
SH2D3C-206ENST00000429553 DZIP1LQ8IYY4 767 aaKnown RBP18.64■□□□□ 0.57
SH2D3C-206ENST00000429553 NSFL1CQ9UNZ2 370 aaKnown RBP18.64■□□□□ 0.57
SH2D3C-206ENST00000429553 TMEM63CQ9P1W3 806 aa18.64■□□□□ 0.57
SH2D3C-206ENST00000429553 INO80Q9ULG1 1556 aaPredicted RBP18.63■□□□□ 0.57
SH2D3C-206ENST00000429553 IQGAP3Q86VI3 1631 aa18.63■□□□□ 0.57
SH2D3C-206ENST00000429553 ASXL1Q8IXJ9 1541 aa18.63■□□□□ 0.57
SH2D3C-206ENST00000429553 HDAC1Q13547 482 aaPredicted RBP18.63■□□□□ 0.57
SH2D3C-206ENST00000429553 RIMBP3CA6NJZ7 1639 aa18.62■□□□□ 0.57
SH2D3C-206ENST00000429553 RIMBP3BA6NNM3 1639 aa18.62■□□□□ 0.57
SH2D3C-206ENST00000429553 RIMBP3Q9UFD9 1639 aa18.62■□□□□ 0.57
SH2D3C-206ENST00000429553 ZKSCAN2Q63HK3 967 aa18.62■□□□□ 0.57
SH2D3C-206ENST00000429553 LRSAM1Q6UWE0 723 aa18.62■□□□□ 0.57
SH2D3C-206ENST00000429553 ATP7AQ04656 1500 aa18.62■□□□□ 0.57
SH2D3C-206ENST00000429553 ITPRIPQ8IWB1 547 aa18.61■□□□□ 0.57
SH2D3C-206ENST00000429553 BCL2L12Q9HB09 334 aa18.61■□□□□ 0.57
SH2D3C-206ENST00000429553 U2AF2P26368 475 aaKnown RBP eCLIP18.61■□□□□ 0.57
SH2D3C-206ENST00000429553 MAPK8IP2Q13387 824 aaPredicted RBP18.61■□□□□ 0.57
SH2D3C-206ENST00000429553 NGEFQ8N5V2 710 aa18.61■□□□□ 0.57
SH2D3C-206ENST00000429553 PRIMPOLQ96LW4 560 aa18.6■□□□□ 0.57
SH2D3C-206ENST00000429553 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.6■□□□□ 0.57
SH2D3C-206ENST00000429553 KIF3AQ9Y496 699 aa18.6■□□□□ 0.57
SH2D3C-206ENST00000429553 CD109Q6YHK3 1445 aa18.6■□□□□ 0.57
SH2D3C-206ENST00000429553 KIF16BQ96L93 1317 aa18.6■□□□□ 0.57
SH2D3C-206ENST00000429553 TCP11L2Q8N4U5 519 aa18.59■□□□□ 0.57
SH2D3C-206ENST00000429553 GTF2F1P35269 517 aaKnown RBP eCLIP18.59■□□□□ 0.57
SH2D3C-206ENST00000429553 AEBP2Q6ZN18 517 aaPredicted RBP18.59■□□□□ 0.57
SH2D3C-206ENST00000429553 HMGN5P82970 282 aaKnown RBP18.59■□□□□ 0.57
SH2D3C-206ENST00000429553 PDCL2Q8N4E4 241 aa18.59■□□□□ 0.57
SH2D3C-206ENST00000429553 ARHGAP31Q2M1Z3 1444 aa18.58■□□□□ 0.57
SH2D3C-206ENST00000429553 NOLC1Q14978 699 aaKnown RBP eCLIP18.58■□□□□ 0.56
SH2D3C-206ENST00000429553 CYB5RLQ6IPT4 315 aa18.58■□□□□ 0.56
SH2D3C-206ENST00000429553 CYP2E1P05181 493 aaPredicted RBP18.58■□□□□ 0.56
SH2D3C-206ENST00000429553 TBC1D9Q6ZT07 1266 aa18.58■□□□□ 0.56
SH2D3C-206ENST00000429553 CFAP74Q9C0B2 1584 aa18.57■□□□□ 0.56
SH2D3C-206ENST00000429553 ZNF771Q7L3S4 317 aaPredicted RBP18.57■□□□□ 0.56
SH2D3C-206ENST00000429553 TRIM27P14373 513 aa18.57■□□□□ 0.56
SH2D3C-206ENST00000429553 NUCB2P80303 420 aa18.57■□□□□ 0.56
SH2D3C-206ENST00000429553 NUCB1Q02818 461 aa18.56■□□□□ 0.56
SH2D3C-206ENST00000429553 FOXD4L5Q5VV16 416 aaPredicted RBP18.56■□□□□ 0.56
SH2D3C-206ENST00000429553 FOXD4L4Q8WXT5 416 aaPredicted RBP18.56■□□□□ 0.56
SH2D3C-206ENST00000429553 TTC12Q9H892 705 aaPredicted RBP18.56■□□□□ 0.56
SH2D3C-206ENST00000429553 PIBF1Q8WXW3 757 aa18.55■□□□□ 0.56
SH2D3C-206ENST00000429553 LAMC1P11047 1609 aa18.55■□□□□ 0.56
SH2D3C-206ENST00000429553 BMP2KLQ5H9B9 411 aa18.54■□□□□ 0.56
SH2D3C-206ENST00000429553 CHD1LQ86WJ1 897 aa18.54■□□□□ 0.56
SH2D3C-206ENST00000429553 ZGPATQ8N5A5 531 aaKnown RBP18.54■□□□□ 0.56
SH2D3C-206ENST00000429553 DEPDC5O75140 1603 aa18.54■□□□□ 0.56
SH2D3C-206ENST00000429553 ZNF518AQ6AHZ1 1483 aa18.54■□□□□ 0.56
SH2D3C-206ENST00000429553 SMC4Q9NTJ3 1288 aa18.54■□□□□ 0.56
SH2D3C-206ENST00000429553 KIDINS220Q9ULH0 1771 aa18.54■□□□□ 0.56
SH2D3C-206ENST00000429553 PLA2R1Q13018 1463 aa18.54■□□□□ 0.56
SH2D3C-206ENST00000429553 ZDHHC9Q9Y397 364 aa18.53■□□□□ 0.56
SH2D3C-206ENST00000429553 TSR2Q969E8 191 aaKnown RBP18.53■□□□□ 0.56
SH2D3C-206ENST00000429553 RUNDC1Q96C34 613 aa18.53■□□□□ 0.56
SH2D3C-206ENST00000429553 DDX19BQ9UMR2 479 aa18.53■□□□□ 0.56
SH2D3C-206ENST00000429553 CDK11BP21127 795 aaKnown RBP18.52■□□□□ 0.55
SH2D3C-206ENST00000429553 WDR63Q8IWG1 891 aa18.52■□□□□ 0.55
SH2D3C-206ENST00000429553 TAF7LQ5H9L4 462 aa18.51■□□□□ 0.55
SH2D3C-206ENST00000429553 TAF3Q5VWG9 929 aa18.51■□□□□ 0.55
SH2D3C-206ENST00000429553 TMEM57Q8N5G2 664 aa18.51■□□□□ 0.55
SH2D3C-206ENST00000429553 PHF23Q9BUL5 403 aaPredicted RBP18.51■□□□□ 0.55
SH2D3C-206ENST00000429553 CARD14Q9BXL6 1004 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms