RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 C1orf167Q5SNV9 1468 aa12.08□□□□□ -0.47
SMC6-204ENST00000428868 PPP2R1AP30153 589 aa12.08□□□□□ -0.48
SMC6-204ENST00000428868 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.08□□□□□ -0.48
SMC6-204ENST00000428868 GGNBP2Q9H3C7 697 aa12.08□□□□□ -0.48
SMC6-204ENST00000428868 MRS2Q9HD23 443 aa12.08□□□□□ -0.48
SMC6-204ENST00000428868 PEAK1Q9H792 1746 aa12.08□□□□□ -0.48
SMC6-204ENST00000428868 CGNL1Q0VF96 1302 aa12.08□□□□□ -0.48
SMC6-204ENST00000428868 NSD2O96028 1365 aa12.07□□□□□ -0.48
SMC6-204ENST00000428868 UBAP1LF5GYI3 381 aa12.07□□□□□ -0.48
SMC6-204ENST00000428868 FYB1O15117 783 aa12.07□□□□□ -0.48
SMC6-204ENST00000428868 DCCP43146 1447 aa12.07□□□□□ -0.48
SMC6-204ENST00000428868 NME9Q86XW9 330 aa12.07□□□□□ -0.48
SMC6-204ENST00000428868 CRYBG1Q9Y4K1 1723 aa12.07□□□□□ -0.48
SMC6-204ENST00000428868 NCOA3Q9Y6Q9 1424 aa12.07□□□□□ -0.48
SMC6-204ENST00000428868 BRD4O60885 1362 aaPredicted RBP12.06□□□□□ -0.48
SMC6-204ENST00000428868 ORAI2Q96SN7 254 aa12.06□□□□□ -0.48
SMC6-204ENST00000428868 NHSL1Q5SYE7 1610 aa12.06□□□□□ -0.48
SMC6-204ENST00000428868 IQSEC2Q5JU85 1478 aa12.06□□□□□ -0.48
SMC6-204ENST00000428868 OVOS2A0A0J9YW53 1432 aa12.05□□□□□ -0.48
SMC6-204ENST00000428868 OVOS2Q6IE36 1432 aa12.05□□□□□ -0.48
SMC6-204ENST00000428868 TNNT2P45379 298 aaPredicted RBP12.05□□□□□ -0.48
SMC6-204ENST00000428868 C19orf44Q9H6X5 657 aa12.05□□□□□ -0.48
SMC6-204ENST00000428868 TTC21BQ7Z4L5 1316 aa12.05□□□□□ -0.48
SMC6-204ENST00000428868 RGPD5Q99666 1765 aa12.05□□□□□ -0.48
SMC6-204ENST00000428868 MSH6P52701 1360 aa12.05□□□□□ -0.48
SMC6-204ENST00000428868 MORC1Q86VD1 984 aa12.04□□□□□ -0.48
SMC6-204ENST00000428868 NLRP13Q86W25 1043 aa12.04□□□□□ -0.48
SMC6-204ENST00000428868 PHF8Q9UPP1 1060 aa12.04□□□□□ -0.48
SMC6-204ENST00000428868 PHRF1Q9P1Y6 1649 aaKnown RBP12.04□□□□□ -0.48
SMC6-204ENST00000428868 ABCA3Q99758 1704 aa12.03□□□□□ -0.48
SMC6-204ENST00000428868 COL3A1P02461 1466 aaPredicted RBP12.03□□□□□ -0.48
SMC6-204ENST00000428868 FBLN1P23142 703 aa12.03□□□□□ -0.48
SMC6-204ENST00000428868 ESCO1Q5FWF5 840 aa12.03□□□□□ -0.48
SMC6-204ENST00000428868 NGDNQ8NEJ9 315 aaKnown RBP12.03□□□□□ -0.48
SMC6-204ENST00000428868 RGPD2P0DJD1 1756 aa12.02□□□□□ -0.48
SMC6-204ENST00000428868 FAM9BQ8IZU0 186 aa12.02□□□□□ -0.49
SMC6-204ENST00000428868 ZNF692Q9BU19 519 aaPredicted RBP12.02□□□□□ -0.49
SMC6-204ENST00000428868 ROBO1Q9Y6N7 1651 aa12.02□□□□□ -0.49
SMC6-204ENST00000428868 ATF3P18847 181 aa12.01□□□□□ -0.49
SMC6-204ENST00000428868 PNISRQ8TF01 805 aaKnown RBP12.01□□□□□ -0.49
SMC6-204ENST00000428868 XPCQ01831 940 aaPredicted RBP12□□□□□ -0.49
SMC6-204ENST00000428868 DDX17Q92841 729 aaKnown RBP12□□□□□ -0.49
SMC6-204ENST00000428868 PXDNQ92626 1479 aa12□□□□□ -0.49
SMC6-204ENST00000428868 SENP3-EIF4A1A0A087X0R7 540 aa11.99□□□□□ -0.49
SMC6-204ENST00000428868 SMG6Q86US8 1419 aaKnown RBP11.99□□□□□ -0.49
SMC6-204ENST00000428868 MED1Q15648 1581 aaPredicted RBP11.99□□□□□ -0.49
SMC6-204ENST00000428868 RGPD1P0DJD0 1748 aa11.98□□□□□ -0.49
SMC6-204ENST00000428868 NFAT5O94916 1531 aa11.98□□□□□ -0.49
SMC6-204ENST00000428868 TTC21AQ8NDW8 1320 aa11.98□□□□□ -0.49
SMC6-204ENST00000428868 FOXO3O43524 673 aa11.98□□□□□ -0.49
SMC6-204ENST00000428868 NUTM2GQ5VZR2 741 aa11.98□□□□□ -0.49
SMC6-204ENST00000428868 CADPS2Q86UW7 1296 aa11.98□□□□□ -0.49
SMC6-204ENST00000428868 DLG5Q8TDM6 1919 aa11.98□□□□□ -0.49
SMC6-204ENST00000428868 SLIT3O75094 1523 aa11.97□□□□□ -0.49
SMC6-204ENST00000428868 USP31Q70CQ4 1352 aa11.97□□□□□ -0.49
SMC6-204ENST00000428868 MTHFSP49914 203 aa11.97□□□□□ -0.49
SMC6-204ENST00000428868 CDK12Q9NYV4 1490 aaPredicted RBP11.96□□□□□ -0.49
SMC6-204ENST00000428868 BLMP54132 1417 aaPredicted RBP11.96□□□□□ -0.49
SMC6-204ENST00000428868 SCAF1Q9H7N4 1312 aaKnown RBP11.96□□□□□ -0.49
SMC6-204ENST00000428868 COG3Q96JB2 828 aa11.96□□□□□ -0.49
SMC6-204ENST00000428868 EMILIN1Q9Y6C2 1016 aa11.96□□□□□ -0.49
SMC6-204ENST00000428868 PHLPP1O60346 1717 aa11.95□□□□□ -0.5
SMC6-204ENST00000428868 PAK3O75914 559 aaPredicted RBP11.95□□□□□ -0.5
SMC6-204ENST00000428868 HSPA1LP34931 641 aa11.95□□□□□ -0.5
SMC6-204ENST00000428868 RRS1Q15050 365 aaKnown RBP11.95□□□□□ -0.5
SMC6-204ENST00000428868 BRINP3Q76B58 766 aa11.95□□□□□ -0.5
SMC6-204ENST00000428868 COL18A1P39060 1754 aa11.95□□□□□ -0.5
SMC6-204ENST00000428868 AATKQ6ZMQ8 1374 aa11.94□□□□□ -0.5
SMC6-204ENST00000428868 SOX12O15370 315 aa11.94□□□□□ -0.5
SMC6-204ENST00000428868 PIP4K2BP78356 416 aa11.94□□□□□ -0.5
SMC6-204ENST00000428868 PSME1Q06323 249 aa11.94□□□□□ -0.5
SMC6-204ENST00000428868 KRT28Q7Z3Y7 464 aa11.94□□□□□ -0.5
SMC6-204ENST00000428868 POLKQ9UBT6 870 aa11.94□□□□□ -0.5
SMC6-204ENST00000428868 VIRMAQ69YN4 1812 aaKnown RBP11.93□□□□□ -0.5
SMC6-204ENST00000428868 HNRNPUQ00839 825 aaKnown RBP eCLIP11.93□□□□□ -0.5
SMC6-204ENST00000428868 PHF23Q9BUL5 403 aaPredicted RBP11.93□□□□□ -0.5
SMC6-204ENST00000428868 TNS3Q68CZ2 1445 aa11.93□□□□□ -0.5
SMC6-204ENST00000428868 AHDC1Q5TGY3 1603 aaPredicted RBP11.93□□□□□ -0.5
SMC6-204ENST00000428868 PNPLA6Q8IY17 1366 aa11.92□□□□□ -0.5
SMC6-204ENST00000428868 NLRP6P59044 892 aa11.92□□□□□ -0.5
SMC6-204ENST00000428868 ABTB2Q8N961 1025 aa11.92□□□□□ -0.5
SMC6-204ENST00000428868 SLAIN2Q9P270 581 aa11.92□□□□□ -0.5
SMC6-204ENST00000428868 ADAMTS8Q9UP79 889 aa11.92□□□□□ -0.5
SMC6-204ENST00000428868 COL16A1Q07092 1604 aaPredicted RBP11.91□□□□□ -0.5
SMC6-204ENST00000428868 TOM1O60784 492 aa11.91□□□□□ -0.5
SMC6-204ENST00000428868 PLEKHG5O94827 1062 aa11.91□□□□□ -0.5
SMC6-204ENST00000428868 NPHP3Q7Z494 1330 aa11.9□□□□□ -0.5
SMC6-204ENST00000428868 PPM1GO15355 546 aaPredicted RBP11.9□□□□□ -0.5
SMC6-204ENST00000428868 SBNO1A3KN83 1393 aa11.9□□□□□ -0.5
SMC6-204ENST00000428868 INSRP06213 1382 aa11.9□□□□□ -0.5
SMC6-204ENST00000428868 USP19O94966 1318 aa11.89□□□□□ -0.51
SMC6-204ENST00000428868 MAP3K19Q56UN5 1328 aa11.89□□□□□ -0.51
SMC6-204ENST00000428868 WDR43Q15061 677 aaKnown RBP eCLIP11.89□□□□□ -0.51
SMC6-204ENST00000428868 CCDC146Q8IYE0 955 aa11.89□□□□□ -0.51
SMC6-204ENST00000428868 CAMTA1Q9Y6Y1 1673 aa11.88□□□□□ -0.51
SMC6-204ENST00000428868 LMOD2Q6P5Q4 547 aa11.88□□□□□ -0.51
SMC6-204ENST00000428868 CFAP53Q96M91 514 aa11.88□□□□□ -0.51
SMC6-204ENST00000428868 COL22A1Q8NFW1 1626 aaPredicted RBP11.88□□□□□ -0.51
SMC6-204ENST00000428868 SOS2Q07890 1332 aaPredicted RBP11.87□□□□□ -0.51
SMC6-204ENST00000428868 SPATA31A3Q5VYP0 1347 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms