RNA–Protein interactions for RNA: ENST00000427795.2

XPC-202, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 2

Gene XPC, Length 820 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-202ENST00000427795 ADGRB2O60241 1585 aa18.42■□□□□ 0.54
XPC-202ENST00000427795 CFAP70Q5T0N1 1121 aa18.4■□□□□ 0.54
XPC-202ENST00000427795 RREB1Q92766 1687 aa18.38■□□□□ 0.53
XPC-202ENST00000427795 TRIM37O94972 964 aa18.38■□□□□ 0.53
XPC-202ENST00000427795 DHX57Q6P158 1386 aaKnown RBP18.38■□□□□ 0.53
XPC-202ENST00000427795 PRR36Q9H6K5 1346 aa18.37■□□□□ 0.53
XPC-202ENST00000427795 ACIN1Q9UKV3 1341 aaKnown RBP18.37■□□□□ 0.53
XPC-202ENST00000427795 DLC1Q96QB1 1528 aa18.37■□□□□ 0.53
XPC-202ENST00000427795 NUP188Q5SRE5 1749 aa18.37■□□□□ 0.53
XPC-202ENST00000427795 YY1P25490 414 aa18.36■□□□□ 0.53
XPC-202ENST00000427795 SPATA31A1Q5TZJ5 1347 aa18.35■□□□□ 0.53
XPC-202ENST00000427795 MPHOSPH9Q99550 1183 aa18.35■□□□□ 0.53
XPC-202ENST00000427795 HIRIP3Q9BW71 556 aaPredicted RBP18.35■□□□□ 0.53
XPC-202ENST00000427795 GPRASP1Q5JY77 1395 aa18.34■□□□□ 0.53
XPC-202ENST00000427795 PRDM11Q9NQV5 511 aa18.34■□□□□ 0.53
XPC-202ENST00000427795 PARD3Q8TEW0 1356 aa18.33■□□□□ 0.53
XPC-202ENST00000427795 APBA3O96018 575 aa18.33■□□□□ 0.52
XPC-202ENST00000427795 FAM196AQ6ZSG2 479 aa18.33■□□□□ 0.52
XPC-202ENST00000427795 POGKQ9P215 609 aa18.33■□□□□ 0.52
XPC-202ENST00000427795 ADGRB1O14514 1584 aa18.33■□□□□ 0.52
XPC-202ENST00000427795 KIAA0232Q92628 1395 aa18.32■□□□□ 0.52
XPC-202ENST00000427795 TULP4Q9NRJ4 1543 aa18.32■□□□□ 0.52
XPC-202ENST00000427795 PHRF1Q9P1Y6 1649 aaKnown RBP18.31■□□□□ 0.52
XPC-202ENST00000427795 CHRNA2Q15822 529 aa18.31■□□□□ 0.52
XPC-202ENST00000427795 MINK1Q8N4C8 1332 aaPredicted RBP18.29■□□□□ 0.52
XPC-202ENST00000427795 PAK3O75914 559 aaPredicted RBP18.28■□□□□ 0.52
XPC-202ENST00000427795 STRN4Q9NRL3 753 aa18.28■□□□□ 0.52
XPC-202ENST00000427795 TRAK1Q9UPV9 953 aa18.27■□□□□ 0.52
XPC-202ENST00000427795 CAMTA1Q9Y6Y1 1673 aa18.26■□□□□ 0.51
XPC-202ENST00000427795 WASLO00401 505 aaPredicted RBP18.26■□□□□ 0.51
XPC-202ENST00000427795 NGDNQ8NEJ9 315 aaKnown RBP18.26■□□□□ 0.51
XPC-202ENST00000427795 USP35Q9P2H5 1018 aa18.26■□□□□ 0.51
XPC-202ENST00000427795 EIF3AQ14152 1382 aaKnown RBP18.26■□□□□ 0.51
XPC-202ENST00000427795 SSH2Q76I76 1423 aa18.25■□□□□ 0.51
XPC-202ENST00000427795 ZC3H6P61129 1189 aaKnown RBP18.25■□□□□ 0.51
XPC-202ENST00000427795 BARGINQ6ZT62 677 aa18.24■□□□□ 0.51
XPC-202ENST00000427795 ATP7BP35670 1465 aa18.24■□□□□ 0.51
XPC-202ENST00000427795 ITSN1Q15811 1721 aa18.23■□□□□ 0.51
XPC-202ENST00000427795 NUTM2GQ5VZR2 741 aa18.23■□□□□ 0.51
XPC-202ENST00000427795 SPON1Q9HCB6 807 aa18.23■□□□□ 0.51
XPC-202ENST00000427795 NINLQ9Y2I6 1382 aa18.22■□□□□ 0.51
XPC-202ENST00000427795 PDE3BQ13370 1112 aa18.22■□□□□ 0.51
XPC-202ENST00000427795 NBPF8Q3BBV2 869 aa18.22■□□□□ 0.51
XPC-202ENST00000427795 NBPF14Q5TI25 921 aa18.22■□□□□ 0.51
XPC-202ENST00000427795 LMO7Q8WWI1 1683 aa18.22■□□□□ 0.51
XPC-202ENST00000427795 NRKQ7Z2Y5 1582 aa18.21■□□□□ 0.51
XPC-202ENST00000427795 KCNQ2O43526 872 aa18.21■□□□□ 0.51
XPC-202ENST00000427795 LARP1Q6PKG0 1096 aaKnown RBP18.21■□□□□ 0.51
XPC-202ENST00000427795 PPP1R1BQ9UD71 204 aaPredicted RBP18.21■□□□□ 0.51
XPC-202ENST00000427795 PEAK1Q9H792 1746 aa18.19■□□□□ 0.5
XPC-202ENST00000427795 PARP4Q9UKK3 1724 aaKnown RBP18.19■□□□□ 0.5
XPC-202ENST00000427795 CASZ1Q86V15 1759 aa18.19■□□□□ 0.5
XPC-202ENST00000427795 GOLGB1Q14789 3259 aaKnown RBP18.18■□□□□ 0.5
XPC-202ENST00000427795 ARHGEF28Q8N1W1 1705 aaKnown RBP18.18■□□□□ 0.5
XPC-202ENST00000427795 TCP11L2Q8N4U5 519 aa18.18■□□□□ 0.5
XPC-202ENST00000427795 NUDT16Q96DE0 195 aaKnown RBP18.18■□□□□ 0.5
XPC-202ENST00000427795 SBF2Q86WG5 1849 aa18.17■□□□□ 0.5
XPC-202ENST00000427795 EVA1CP58658 441 aa18.17■□□□□ 0.5
XPC-202ENST00000427795 TOPAZ1Q8N9V7 1692 aa18.17■□□□□ 0.5
XPC-202ENST00000427795 RGPD3A6NKT7 1758 aaPredicted RBP18.17■□□□□ 0.5
XPC-202ENST00000427795 RGPD4Q7Z3J3 1758 aa18.17■□□□□ 0.5
XPC-202ENST00000427795 CEP350Q5VT06 3117 aa18.16■□□□□ 0.5
XPC-202ENST00000427795 ANO8Q9HCE9 1232 aaPredicted RBP18.16■□□□□ 0.5
XPC-202ENST00000427795 POLR3AO14802 1390 aaPredicted RBP18.16■□□□□ 0.5
XPC-202ENST00000427795 PDGFDQ9GZP0 370 aaPredicted RBP18.15■□□□□ 0.5
XPC-202ENST00000427795 CPDO75976 1380 aa18.15■□□□□ 0.5
XPC-202ENST00000427795 MYOM1P52179 1685 aa18.13■□□□□ 0.49
XPC-202ENST00000427795 PTF1AQ7RTS3 328 aa18.13■□□□□ 0.49
XPC-202ENST00000427795 USP19O94966 1318 aa18.13■□□□□ 0.49
XPC-202ENST00000427795 ACEP12821 1306 aa18.13■□□□□ 0.49
XPC-202ENST00000427795 COL5A2P05997 1499 aaPredicted RBP18.13■□□□□ 0.49
XPC-202ENST00000427795 LRRC37A3O60309 1634 aa18.12■□□□□ 0.49
XPC-202ENST00000427795 DCAF8L1A6NGE4 600 aa18.12■□□□□ 0.49
XPC-202ENST00000427795 KDM2AQ9Y2K7 1162 aa18.12■□□□□ 0.49
XPC-202ENST00000427795 ZNF784Q8NCA9 323 aaPredicted RBP18.11■□□□□ 0.49
XPC-202ENST00000427795 CDK19Q9BWU1 502 aa18.11■□□□□ 0.49
XPC-202ENST00000427795 THRAP3Q9Y2W1 955 aaKnown RBP18.11■□□□□ 0.49
XPC-202ENST00000427795 OVOS2A0A0G2JMS6 1433 aa18.11■□□□□ 0.49
XPC-202ENST00000427795 OVOS2A0A0J9YW53 1432 aa18.11■□□□□ 0.49
XPC-202ENST00000427795 OVOS2Q6IE36 1432 aa18.11■□□□□ 0.49
XPC-202ENST00000427795 PLSCR1O15162 318 aa18.09■□□□□ 0.49
XPC-202ENST00000427795 PTGER2P43116 358 aa18.09■□□□□ 0.49
XPC-202ENST00000427795 PROM2Q8N271 834 aa18.09■□□□□ 0.49
XPC-202ENST00000427795 ABTB2Q8N961 1025 aa18.09■□□□□ 0.49
XPC-202ENST00000427795 DCAF11Q8TEB1 546 aa18.09■□□□□ 0.49
XPC-202ENST00000427795 ZBTB7AO95365 584 aa18.08■□□□□ 0.48
XPC-202ENST00000427795 CRB1P82279 1406 aa18.07■□□□□ 0.48
XPC-202ENST00000427795 PLEKHG3A1L390 1219 aa18.07■□□□□ 0.48
XPC-202ENST00000427795 GCP02774 474 aa18.07■□□□□ 0.48
XPC-202ENST00000427795 CCDC61Q9Y6R9 512 aa18.07■□□□□ 0.48
XPC-202ENST00000427795 WNK3Q9BYP7 1800 aa18.06■□□□□ 0.48
XPC-202ENST00000427795 C11orf95C9JLR9 678 aaPredicted RBP18.05■□□□□ 0.48
XPC-202ENST00000427795 BCL11BQ9C0K0 894 aaPredicted RBP18.05■□□□□ 0.48
XPC-202ENST00000427795 CHD4Q14839 1912 aa18.05■□□□□ 0.48
XPC-202ENST00000427795 ATF5Q9Y2D1 282 aaPredicted RBP18.04■□□□□ 0.48
XPC-202ENST00000427795 COL18A1P39060 1754 aa18.03■□□□□ 0.48
XPC-202ENST00000427795 DDB1Q16531 1140 aa18.02■□□□□ 0.48
XPC-202ENST00000427795 NLRP13Q86W25 1043 aa18.02■□□□□ 0.48
XPC-202ENST00000427795 MARCH10Q8NA82 808 aaPredicted RBP18.02■□□□□ 0.48
XPC-202ENST00000427795 AKAP12Q02952 1782 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms