RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 PRAM1Q96QH2 718 aa21.24■□□□□ 0.99
HDAC6-206ENST00000426196 CAMKK2Q96RR4 588 aa21.23■□□□□ 0.99
HDAC6-206ENST00000426196 CRYBG1Q9Y4K1 1723 aa21.22■□□□□ 0.99
HDAC6-206ENST00000426196 TRIM37O94972 964 aa21.22■□□□□ 0.99
HDAC6-206ENST00000426196 FAM196AQ6ZSG2 479 aa21.22■□□□□ 0.99
HDAC6-206ENST00000426196 C14orf93Q9H972 538 aaKnown RBP21.22■□□□□ 0.99
HDAC6-206ENST00000426196 RREB1Q92766 1687 aa21.21■□□□□ 0.99
HDAC6-206ENST00000426196 PRDM11Q9NQV5 511 aa21.21■□□□□ 0.99
HDAC6-206ENST00000426196 POGKQ9P215 609 aa21.2■□□□□ 0.98
HDAC6-206ENST00000426196 DLC1Q96QB1 1528 aa21.19■□□□□ 0.98
HDAC6-206ENST00000426196 APBA3O96018 575 aa21.19■□□□□ 0.98
HDAC6-206ENST00000426196 EIF3AQ14152 1382 aaKnown RBP21.19■□□□□ 0.98
HDAC6-206ENST00000426196 NUP188Q5SRE5 1749 aa21.18■□□□□ 0.98
HDAC6-206ENST00000426196 DCAF8L1A6NGE4 600 aa21.18■□□□□ 0.98
HDAC6-206ENST00000426196 SPATA31A1Q5TZJ5 1347 aa21.18■□□□□ 0.98
HDAC6-206ENST00000426196 ACIN1Q9UKV3 1341 aaKnown RBP21.18■□□□□ 0.98
HDAC6-206ENST00000426196 CFAP70Q5T0N1 1121 aa21.17■□□□□ 0.98
HDAC6-206ENST00000426196 NBPF8Q3BBV2 869 aa21.16■□□□□ 0.98
HDAC6-206ENST00000426196 NBPF14Q5TI25 921 aa21.16■□□□□ 0.98
HDAC6-206ENST00000426196 PPP1R1BQ9UD71 204 aaPredicted RBP21.16■□□□□ 0.98
HDAC6-206ENST00000426196 PAK3O75914 559 aaPredicted RBP21.15■□□□□ 0.98
HDAC6-206ENST00000426196 TULP4Q9NRJ4 1543 aa21.14■□□□□ 0.97
HDAC6-206ENST00000426196 NGDNQ8NEJ9 315 aaKnown RBP21.13■□□□□ 0.97
HDAC6-206ENST00000426196 MPHOSPH9Q99550 1183 aa21.13■□□□□ 0.97
HDAC6-206ENST00000426196 STRN4Q9NRL3 753 aa21.13■□□□□ 0.97
HDAC6-206ENST00000426196 KIAA0232Q92628 1395 aa21.12■□□□□ 0.97
HDAC6-206ENST00000426196 PDE3BQ13370 1112 aa21.12■□□□□ 0.97
HDAC6-206ENST00000426196 HIRIP3Q9BW71 556 aaPredicted RBP21.12■□□□□ 0.97
HDAC6-206ENST00000426196 SPON1Q9HCB6 807 aa21.12■□□□□ 0.97
HDAC6-206ENST00000426196 PHRF1Q9P1Y6 1649 aaKnown RBP21.11■□□□□ 0.97
HDAC6-206ENST00000426196 NINLQ9Y2I6 1382 aa21.11■□□□□ 0.97
HDAC6-206ENST00000426196 PRR36Q9H6K5 1346 aa21.1■□□□□ 0.97
HDAC6-206ENST00000426196 ITSN1Q15811 1721 aa21.1■□□□□ 0.97
HDAC6-206ENST00000426196 MINK1Q8N4C8 1332 aaPredicted RBP21.09■□□□□ 0.97
HDAC6-206ENST00000426196 CHRNA2Q15822 529 aa21.09■□□□□ 0.97
HDAC6-206ENST00000426196 USP35Q9P2H5 1018 aa21.09■□□□□ 0.97
HDAC6-206ENST00000426196 KCNQ2O43526 872 aa21.08■□□□□ 0.97
HDAC6-206ENST00000426196 BARGINQ6ZT62 677 aa21.07■□□□□ 0.96
HDAC6-206ENST00000426196 WASLO00401 505 aaPredicted RBP21.06■□□□□ 0.96
HDAC6-206ENST00000426196 EVA1CP58658 441 aa21.06■□□□□ 0.96
HDAC6-206ENST00000426196 TRAK1Q9UPV9 953 aa21.06■□□□□ 0.96
HDAC6-206ENST00000426196 UTRNP46939 3433 aa21.06■□□□□ 0.96
HDAC6-206ENST00000426196 ATP7BP35670 1465 aa21.06■□□□□ 0.96
HDAC6-206ENST00000426196 ADGRB1O14514 1584 aa21.06■□□□□ 0.96
HDAC6-206ENST00000426196 SSH2Q76I76 1423 aa21.05■□□□□ 0.96
HDAC6-206ENST00000426196 ZC3H6P61129 1189 aaKnown RBP21.05■□□□□ 0.96
HDAC6-206ENST00000426196 CAMTA1Q9Y6Y1 1673 aa21.02■□□□□ 0.96
HDAC6-206ENST00000426196 TCP11L2Q8N4U5 519 aa21.02■□□□□ 0.96
HDAC6-206ENST00000426196 RGPD3A6NKT7 1758 aaPredicted RBP21.01■□□□□ 0.95
HDAC6-206ENST00000426196 RGPD4Q7Z3J3 1758 aa21.01■□□□□ 0.95
HDAC6-206ENST00000426196 C11orf95C9JLR9 678 aaPredicted RBP21.01■□□□□ 0.95
HDAC6-206ENST00000426196 PARP4Q9UKK3 1724 aaKnown RBP21.01■□□□□ 0.95
HDAC6-206ENST00000426196 NUTM2GQ5VZR2 741 aa20.99■□□□□ 0.95
HDAC6-206ENST00000426196 NRKQ7Z2Y5 1582 aa20.98■□□□□ 0.95
HDAC6-206ENST00000426196 LARP1Q6PKG0 1096 aaKnown RBP20.98■□□□□ 0.95
HDAC6-206ENST00000426196 THRAP3Q9Y2W1 955 aaKnown RBP20.98■□□□□ 0.95
HDAC6-206ENST00000426196 LMO7Q8WWI1 1683 aa20.97■□□□□ 0.95
HDAC6-206ENST00000426196 SBF2Q86WG5 1849 aa20.97■□□□□ 0.95
HDAC6-206ENST00000426196 CASZ1Q86V15 1759 aa20.96■□□□□ 0.95
HDAC6-206ENST00000426196 NUDT16Q96DE0 195 aaKnown RBP20.96■□□□□ 0.95
HDAC6-206ENST00000426196 CPDO75976 1380 aa20.95■□□□□ 0.94
HDAC6-206ENST00000426196 ARHGEF28Q8N1W1 1705 aaKnown RBP20.95■□□□□ 0.94
HDAC6-206ENST00000426196 OVOS2A0A0G2JMS6 1433 aa20.95■□□□□ 0.94
HDAC6-206ENST00000426196 OVOS2A0A0J9YW53 1432 aa20.95■□□□□ 0.94
HDAC6-206ENST00000426196 OVOS2Q6IE36 1432 aa20.95■□□□□ 0.94
HDAC6-206ENST00000426196 CHD4Q14839 1912 aa20.94■□□□□ 0.94
HDAC6-206ENST00000426196 TOPAZ1Q8N9V7 1692 aa20.93■□□□□ 0.94
HDAC6-206ENST00000426196 PEAK1Q9H792 1746 aa20.92■□□□□ 0.94
HDAC6-206ENST00000426196 ZNF784Q8NCA9 323 aaPredicted RBP20.92■□□□□ 0.94
HDAC6-206ENST00000426196 POLR3AO14802 1390 aaPredicted RBP20.92■□□□□ 0.94
HDAC6-206ENST00000426196 PLSCR1O15162 318 aa20.91■□□□□ 0.94
HDAC6-206ENST00000426196 MYOM1P52179 1685 aa20.91■□□□□ 0.94
HDAC6-206ENST00000426196 ABTB2Q8N961 1025 aa20.91■□□□□ 0.94
HDAC6-206ENST00000426196 ANO8Q9HCE9 1232 aaPredicted RBP20.91■□□□□ 0.94
HDAC6-206ENST00000426196 COL5A2P05997 1499 aaPredicted RBP20.9■□□□□ 0.94
HDAC6-206ENST00000426196 ACEP12821 1306 aa20.9■□□□□ 0.94
HDAC6-206ENST00000426196 USP19O94966 1318 aa20.89■□□□□ 0.93
HDAC6-206ENST00000426196 KDM2AQ9Y2K7 1162 aa20.89■□□□□ 0.93
HDAC6-206ENST00000426196 LRRC37A3O60309 1634 aa20.89■□□□□ 0.93
HDAC6-206ENST00000426196 CRB1P82279 1406 aa20.88■□□□□ 0.93
HDAC6-206ENST00000426196 SENP3-EIF4A1A0A087X0R7 540 aa20.87■□□□□ 0.93
HDAC6-206ENST00000426196 ZBTB7AO95365 584 aa20.87■□□□□ 0.93
HDAC6-206ENST00000426196 CDK19Q9BWU1 502 aa20.87■□□□□ 0.93
HDAC6-206ENST00000426196 BCL11BQ9C0K0 894 aaPredicted RBP20.87■□□□□ 0.93
HDAC6-206ENST00000426196 NLRP13Q86W25 1043 aa20.86■□□□□ 0.93
HDAC6-206ENST00000426196 DCAF11Q8TEB1 546 aa20.86■□□□□ 0.93
HDAC6-206ENST00000426196 CCDC61Q9Y6R9 512 aa20.86■□□□□ 0.93
HDAC6-206ENST00000426196 AKAP12Q02952 1782 aa20.85■□□□□ 0.93
HDAC6-206ENST00000426196 GCP02774 474 aa20.85■□□□□ 0.93
HDAC6-206ENST00000426196 DDB1Q16531 1140 aa20.85■□□□□ 0.93
HDAC6-206ENST00000426196 WNK3Q9BYP7 1800 aa20.84■□□□□ 0.93
HDAC6-206ENST00000426196 STAC3Q96MF2 364 aa20.84■□□□□ 0.93
HDAC6-206ENST00000426196 PLEKHG3A1L390 1219 aa20.83■□□□□ 0.93
HDAC6-206ENST00000426196 PDGFDQ9GZP0 370 aaPredicted RBP20.83■□□□□ 0.93
HDAC6-206ENST00000426196 PTGER2P43116 358 aa20.82■□□□□ 0.92
HDAC6-206ENST00000426196 ATF5Q9Y2D1 282 aaPredicted RBP20.82■□□□□ 0.92
HDAC6-206ENST00000426196 ZBTB7CA1YPR0 619 aa20.81■□□□□ 0.92
HDAC6-206ENST00000426196 STK32BQ9NY57 414 aa20.81■□□□□ 0.92
HDAC6-206ENST00000426196 C1QTNF8P60827 252 aa20.8■□□□□ 0.92
HDAC6-206ENST00000426196 SYT17Q9BSW7 474 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms