RNA–Protein interactions for RNA: ENST00000425388.1

LINC00501-201, long intergenic non-protein coding RNA 501, humanhuman

TSL 2 BASIC

Gene LINC00501, Length 2,046 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00501-201ENST00000425388 RAB3GAP1Q15042 981 aa10.11□□□□□ -0.79
LINC00501-201ENST00000425388 CLEC17AQ6ZS10 378 aa10.11□□□□□ -0.79
LINC00501-201ENST00000425388 ANKRD13AQ8IZ07 590 aa10.11□□□□□ -0.79
LINC00501-201ENST00000425388 KIAA2012Q0VF49 1180 aa10.1□□□□□ -0.79
LINC00501-201ENST00000425388 SMC5Q8IY18 1101 aa10.1□□□□□ -0.79
LINC00501-201ENST00000425388 TNPO1Q92973 898 aaKnown RBP10.1□□□□□ -0.79
LINC00501-201ENST00000425388 TIGD1Q96MW7 591 aa10.1□□□□□ -0.79
LINC00501-201ENST00000425388 CDK13Q14004 1512 aaKnown RBP10.1□□□□□ -0.79
LINC00501-201ENST00000425388 PLB1Q6P1J6 1458 aa10.1□□□□□ -0.79
LINC00501-201ENST00000425388 ATP2B3Q16720 1220 aa10.09□□□□□ -0.79
LINC00501-201ENST00000425388 ZNF710Q8N1W2 664 aa10.09□□□□□ -0.79
LINC00501-201ENST00000425388 SNX21Q969T3 373 aa10.09□□□□□ -0.79
LINC00501-201ENST00000425388 CLUAP1Q96AJ1 413 aa10.09□□□□□ -0.79
LINC00501-201ENST00000425388 TCOF1Q13428 1488 aaKnown RBP10.09□□□□□ -0.79
LINC00501-201ENST00000425388 MBD5Q9P267 1494 aa10.09□□□□□ -0.79
LINC00501-201ENST00000425388 TROQ12816 1431 aaPredicted RBP10.09□□□□□ -0.79
LINC00501-201ENST00000425388 ANKRD30BQ9BXX2 1392 aa10.09□□□□□ -0.79
LINC00501-201ENST00000425388 ANKRD30AQ9BXX3 1397 aa10.09□□□□□ -0.79
LINC00501-201ENST00000425388 CREBRFQ8IUR6 639 aa10.09□□□□□ -0.79
LINC00501-201ENST00000425388 PDCL2Q8N4E4 241 aa10.09□□□□□ -0.79
LINC00501-201ENST00000425388 ADCY10Q96PN6 1610 aa10.08□□□□□ -0.8
LINC00501-201ENST00000425388 LOC102724159A0A0B4J2E5 919 aa10.08□□□□□ -0.8
LINC00501-201ENST00000425388 PWP2Q15269 919 aaKnown RBP10.08□□□□□ -0.8
LINC00501-201ENST00000425388 EXOC8Q8IYI6 725 aa10.08□□□□□ -0.8
LINC00501-201ENST00000425388 KDM4CQ9H3R0 1056 aa10.08□□□□□ -0.8
LINC00501-201ENST00000425388 PANK3Q9H999 370 aa10.08□□□□□ -0.8
LINC00501-201ENST00000425388 IGSF5Q9NSI5 407 aa10.08□□□□□ -0.8
LINC00501-201ENST00000425388 GEMIN8Q9NWZ8 242 aaKnown RBP10.08□□□□□ -0.8
LINC00501-201ENST00000425388 OGFRQ9NZT2 677 aa10.08□□□□□ -0.8
LINC00501-201ENST00000425388 CALCOCO1Q9P1Z2 691 aa10.08□□□□□ -0.8
LINC00501-201ENST00000425388 RTEL1-TNFRSF6BF6WH68 1400 aa10.08□□□□□ -0.8
LINC00501-201ENST00000425388 SENP3-EIF4A1A0A087X0R7 540 aa10.07□□□□□ -0.8
LINC00501-201ENST00000425388 SMARCA5O60264 1052 aaPredicted RBP10.07□□□□□ -0.8
LINC00501-201ENST00000425388 KCNJ4P48050 445 aa10.07□□□□□ -0.8
LINC00501-201ENST00000425388 SPATA32Q96LK8 384 aa10.07□□□□□ -0.8
LINC00501-201ENST00000425388 MPHOSPH9Q99550 1183 aa10.07□□□□□ -0.8
LINC00501-201ENST00000425388 PLEKHD1A6NEE1 506 aa10.07□□□□□ -0.8
LINC00501-201ENST00000425388 TULP2O00295 520 aa10.07□□□□□ -0.8
LINC00501-201ENST00000425388 ANAPC15P60006 121 aa10.07□□□□□ -0.8
LINC00501-201ENST00000425388 C22orf23Q9BZE7 217 aa10.07□□□□□ -0.8
LINC00501-201ENST00000425388 UHRF1BP1LA0JNW5 1464 aa10.06□□□□□ -0.8
LINC00501-201ENST00000425388 PMFBP1Q8TBY8 1022 aa10.06□□□□□ -0.8
LINC00501-201ENST00000425388 EFCC1Q9HA90 598 aa10.06□□□□□ -0.8
LINC00501-201ENST00000425388 SERPINA10Q9UK55 444 aa10.06□□□□□ -0.8
LINC00501-201ENST00000425388 PDE3AQ14432 1141 aa10.06□□□□□ -0.8
LINC00501-201ENST00000425388 DUSP27Q5VZP5 1158 aa10.06□□□□□ -0.8
LINC00501-201ENST00000425388 ZNF622Q969S3 477 aaKnown RBP eCLIP10.06□□□□□ -0.8
LINC00501-201ENST00000425388 RIPOR2Q9Y4F9 1068 aa10.06□□□□□ -0.8
LINC00501-201ENST00000425388 ATP10BO94823 1461 aa10.05□□□□□ -0.8
LINC00501-201ENST00000425388 NOL8Q76FK4 1167 aaKnown RBP10.04□□□□□ -0.8
LINC00501-201ENST00000425388 CCDC97Q96F63 343 aaPredicted RBP10.04□□□□□ -0.8
LINC00501-201ENST00000425388 DDX49Q9Y6V7 483 aaKnown RBP10.04□□□□□ -0.8
LINC00501-201ENST00000425388 ABCC2Q92887 1545 aa10.04□□□□□ -0.8
LINC00501-201ENST00000425388 HSP90AB4PQ58FF6 505 aa10.04□□□□□ -0.8
LINC00501-201ENST00000425388 ANKRD7Q92527 254 aa10.04□□□□□ -0.8
LINC00501-201ENST00000425388 RALGAPBQ86X10 1494 aa10.03□□□□□ -0.8
LINC00501-201ENST00000425388 IGHDP01880 384 aa10.03□□□□□ -0.8
LINC00501-201ENST00000425388 SYCP1Q15431 976 aa10.03□□□□□ -0.8
LINC00501-201ENST00000425388 PIBF1Q8WXW3 757 aa10.03□□□□□ -0.8
LINC00501-201ENST00000425388 DIAPH3Q9NSV4 1193 aa10.03□□□□□ -0.8
LINC00501-201ENST00000425388 ITSN2Q9NZM3 1697 aa10.03□□□□□ -0.8
LINC00501-201ENST00000425388 ONECUT3O60422 494 aaPredicted RBP10.02□□□□□ -0.8
LINC00501-201ENST00000425388 GOLGA2Q08379 1002 aa10.02□□□□□ -0.8
LINC00501-201ENST00000425388 CNPY4Q8N129 248 aa10.02□□□□□ -0.8
LINC00501-201ENST00000425388 BCL2L12Q9HB09 334 aa10.02□□□□□ -0.8
LINC00501-201ENST00000425388 HDAC5Q9UQL6 1122 aa10.02□□□□□ -0.8
LINC00501-201ENST00000425388 NPC1L1Q9UHC9 1359 aa10.02□□□□□ -0.81
LINC00501-201ENST00000425388 UHRF1BP1Q6BDS2 1440 aa10.02□□□□□ -0.81
LINC00501-201ENST00000425388 ZNF521Q96K83 1311 aa10.02□□□□□ -0.81
LINC00501-201ENST00000425388 NKTRP30414 1462 aaKnown RBP10.01□□□□□ -0.81
LINC00501-201ENST00000425388 PATL2C9JE40 543 aaKnown RBP10.01□□□□□ -0.81
LINC00501-201ENST00000425388 CHAF1AQ13111 956 aaPredicted RBP10.01□□□□□ -0.81
LINC00501-201ENST00000425388 ZNF777Q9ULD5 760 aaPredicted RBP10.01□□□□□ -0.81
LINC00501-201ENST00000425388 PLXNC1O60486 1568 aa10.01□□□□□ -0.81
LINC00501-201ENST00000425388 UNCXA6NJT0 531 aa10□□□□□ -0.81
LINC00501-201ENST00000425388 SLFN14P0C7P3 912 aa10□□□□□ -0.81
LINC00501-201ENST00000425388 PSEN1P49768 467 aa10□□□□□ -0.81
LINC00501-201ENST00000425388 ZSCAN23Q3MJ62 389 aa10□□□□□ -0.81
LINC00501-201ENST00000425388 CTR9Q6PD62 1173 aa10□□□□□ -0.81
LINC00501-201ENST00000425388 FKBP5Q13451 457 aaPredicted RBP10□□□□□ -0.81
LINC00501-201ENST00000425388 OSCARQ8IYS5 282 aa10□□□□□ -0.81
LINC00501-201ENST00000425388 AK7Q96M32 723 aa10□□□□□ -0.81
LINC00501-201ENST00000425388 RBSNQ9H1K0 784 aa10□□□□□ -0.81
LINC00501-201ENST00000425388 CAMSAP2Q08AD1 1489 aa9.99□□□□□ -0.81
LINC00501-201ENST00000425388 APPP05067 770 aa9.99□□□□□ -0.81
LINC00501-201ENST00000425388 SPTLC3Q9NUV7 552 aa9.99□□□□□ -0.81
LINC00501-201ENST00000425388 ERCC6L2Q5T890 1561 aa9.99□□□□□ -0.81
LINC00501-201ENST00000425388 ABCC10Q5T3U5 1492 aa9.99□□□□□ -0.81
LINC00501-201ENST00000425388 GPATCH8Q9UKJ3 1502 aaKnown RBP9.99□□□□□ -0.81
LINC00501-201ENST00000425388 TRIM6-TRIM34B2RNG4 842 aa9.99□□□□□ -0.81
LINC00501-201ENST00000425388 CTIFO43310 598 aaKnown RBP9.99□□□□□ -0.81
LINC00501-201ENST00000425388 PTMAP06454 111 aaKnown RBP9.99□□□□□ -0.81
LINC00501-201ENST00000425388 NOLC1Q14978 699 aaKnown RBP eCLIP9.99□□□□□ -0.81
LINC00501-201ENST00000425388 GRIPAP1Q4V328 841 aa9.99□□□□□ -0.81
LINC00501-201ENST00000425388 TRMT2AQ8IZ69 625 aaKnown RBP9.99□□□□□ -0.81
LINC00501-201ENST00000425388 TRIM34Q9BYJ4 488 aa9.99□□□□□ -0.81
LINC00501-201ENST00000425388 ROCK1Q13464 1354 aa9.98□□□□□ -0.81
LINC00501-201ENST00000425388 U2AF2P26368 475 aaKnown RBP eCLIP9.98□□□□□ -0.81
LINC00501-201ENST00000425388 SLFN5Q08AF3 891 aa9.98□□□□□ -0.81
LINC00501-201ENST00000425388 TERF2Q15554 542 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms