RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 MYOM1P52179 1685 aa18.41■□□□□ 0.54
MSH5-206ENST00000423982 NUTM2FA1L443 756 aa18.41■□□□□ 0.54
MSH5-206ENST00000423982 CANXP27824 592 aaKnown RBP18.41■□□□□ 0.54
MSH5-206ENST00000423982 AMOTL2Q9Y2J4 779 aa18.41■□□□□ 0.54
MSH5-206ENST00000423982 SETD1AO15047 1707 aaKnown RBP18.41■□□□□ 0.54
MSH5-206ENST00000423982 E9PSI1 815 aa18.4■□□□□ 0.54
MSH5-206ENST00000423982 RRP7AQ9Y3A4 280 aaKnown RBP18.4■□□□□ 0.54
MSH5-206ENST00000423982 CLUAP1Q96AJ1 413 aa18.4■□□□□ 0.54
MSH5-206ENST00000423982 ARXQ96QS3 562 aa18.39■□□□□ 0.53
MSH5-206ENST00000423982 CARD14Q9BXL6 1004 aa18.39■□□□□ 0.53
MSH5-206ENST00000423982 ROBO2Q9HCK4 1378 aa18.39■□□□□ 0.53
MSH5-206ENST00000423982 SLC12A5Q9H2X9 1139 aa18.38■□□□□ 0.53
MSH5-206ENST00000423982 VIRMAQ69YN4 1812 aaKnown RBP18.38■□□□□ 0.53
MSH5-206ENST00000423982 CDCA8Q53HL2 280 aa18.38■□□□□ 0.53
MSH5-206ENST00000423982 BCL2L13Q9BXK5 485 aa18.38■□□□□ 0.53
MSH5-206ENST00000423982 PTPRUQ92729 1446 aa18.38■□□□□ 0.53
MSH5-206ENST00000423982 TNNT2P45379 298 aaPredicted RBP18.37■□□□□ 0.53
MSH5-206ENST00000423982 ZNF142P52746 1687 aaPredicted RBP18.37■□□□□ 0.53
MSH5-206ENST00000423982 EVC2Q86UK5 1308 aa18.37■□□□□ 0.53
MSH5-206ENST00000423982 KCNA6P17658 529 aa18.36■□□□□ 0.53
MSH5-206ENST00000423982 ABCC11Q96J66 1382 aa18.36■□□□□ 0.53
MSH5-206ENST00000423982 WWC1Q8IX03 1113 aa18.36■□□□□ 0.53
MSH5-206ENST00000423982 SPRYD3Q8NCJ5 442 aa18.36■□□□□ 0.53
MSH5-206ENST00000423982 TBX22Q9Y458 520 aa18.36■□□□□ 0.53
MSH5-206ENST00000423982 CGNL1Q0VF96 1302 aa18.35■□□□□ 0.53
MSH5-206ENST00000423982 RLBP1P12271 317 aa18.35■□□□□ 0.53
MSH5-206ENST00000423982 TULP4Q9NRJ4 1543 aa18.35■□□□□ 0.53
MSH5-206ENST00000423982 CDK19Q9BWU1 502 aa18.35■□□□□ 0.53
MSH5-206ENST00000423982 PCDHB15Q9Y5E8 787 aa18.35■□□□□ 0.53
MSH5-206ENST00000423982 PDE3AQ14432 1141 aa18.34■□□□□ 0.53
MSH5-206ENST00000423982 SBNO2Q9Y2G9 1366 aa18.33■□□□□ 0.52
MSH5-206ENST00000423982 MED14O60244 1454 aa18.32■□□□□ 0.52
MSH5-206ENST00000423982 NPHP4O75161 1426 aaPredicted RBP18.32■□□□□ 0.52
MSH5-206ENST00000423982 MAPK8IP3Q9UPT6 1336 aa18.31■□□□□ 0.52
MSH5-206ENST00000423982 FAM43AQ8N2R8 423 aa18.3■□□□□ 0.52
MSH5-206ENST00000423982 ANTXR1Q9H6X2 564 aa18.3■□□□□ 0.52
MSH5-206ENST00000423982 NPC1L1Q9UHC9 1359 aa18.3■□□□□ 0.52
MSH5-206ENST00000423982 BECN1Q14457 450 aa18.3■□□□□ 0.52
MSH5-206ENST00000423982 PDZRN3Q9UPQ7 1066 aa18.29■□□□□ 0.52
MSH5-206ENST00000423982 TBC1D2Q9BYX2 928 aa18.29■□□□□ 0.52
MSH5-206ENST00000423982 RRAGDQ9NQL2 400 aaPredicted RBP18.29■□□□□ 0.52
MSH5-206ENST00000423982 RARSP54136 660 aaKnown RBP18.29■□□□□ 0.52
MSH5-206ENST00000423982 SLC24A1O60721 1099 aa18.28■□□□□ 0.52
MSH5-206ENST00000423982 CABP1Q9NZU7 370 aa18.28■□□□□ 0.52
MSH5-206ENST00000423982 WASLO00401 505 aaPredicted RBP18.27■□□□□ 0.51
MSH5-206ENST00000423982 C14orf37Q86TY3 774 aa18.27■□□□□ 0.51
MSH5-206ENST00000423982 GZF1Q9H116 711 aaPredicted RBP18.26■□□□□ 0.51
MSH5-206ENST00000423982 LMTK3Q96Q04 1460 aa18.26■□□□□ 0.51
MSH5-206ENST00000423982 TCP11L2Q8N4U5 519 aa18.26■□□□□ 0.51
MSH5-206ENST00000423982 TBC1D32Q96NH3 1257 aa18.26■□□□□ 0.51
MSH5-206ENST00000423982 DLC1Q96QB1 1528 aa18.26■□□□□ 0.51
MSH5-206ENST00000423982 TECPR2O15040 1411 aa18.25■□□□□ 0.51
MSH5-206ENST00000423982 CPS1P31327 1500 aa18.24■□□□□ 0.51
MSH5-206ENST00000423982 FAM135BQ49AJ0 1406 aa18.24■□□□□ 0.51
MSH5-206ENST00000423982 MORC1Q86VD1 984 aa18.22■□□□□ 0.51
MSH5-206ENST00000423982 NUDT16Q96DE0 195 aaKnown RBP18.22■□□□□ 0.51
MSH5-206ENST00000423982 NSD3Q9BZ95 1437 aa18.22■□□□□ 0.51
MSH5-206ENST00000423982 PMFBP1Q8TBY8 1022 aa18.22■□□□□ 0.51
MSH5-206ENST00000423982 UPF2Q9HAU5 1272 aaKnown RBP18.22■□□□□ 0.51
MSH5-206ENST00000423982 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.21■□□□□ 0.51
MSH5-206ENST00000423982 DIP2AQ14689 1571 aa18.21■□□□□ 0.51
MSH5-206ENST00000423982 PANK2Q9BZ23 570 aa18.21■□□□□ 0.51
MSH5-206ENST00000423982 POLR3AO14802 1390 aaPredicted RBP18.21■□□□□ 0.51
MSH5-206ENST00000423982 PRR36Q9H6K5 1346 aa18.21■□□□□ 0.51
MSH5-206ENST00000423982 KNDC1Q76NI1 1749 aa18.2■□□□□ 0.5
MSH5-206ENST00000423982 RUNDC1Q96C34 613 aa18.2■□□□□ 0.5
MSH5-206ENST00000423982 A0A1W2PP64 1363 aa18.2■□□□□ 0.5
MSH5-206ENST00000423982 SHPRHQ149N8 1683 aa18.2■□□□□ 0.5
MSH5-206ENST00000423982 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.2■□□□□ 0.5
MSH5-206ENST00000423982 ATAD2Q6PL18 1390 aa18.2■□□□□ 0.5
MSH5-206ENST00000423982 NINLQ9Y2I6 1382 aa18.2■□□□□ 0.5
MSH5-206ENST00000423982 XRCC6P12956 609 aaKnown RBP eCLIP18.19■□□□□ 0.5
MSH5-206ENST00000423982 RSPH6AQ9H0K4 717 aa18.19■□□□□ 0.5
MSH5-206ENST00000423982 PROSER2Q86WR7 435 aaPredicted RBP18.18■□□□□ 0.5
MSH5-206ENST00000423982 SIRT1Q96EB6 747 aa18.18■□□□□ 0.5
MSH5-206ENST00000423982 MFAP1P55081 439 aaKnown RBP18.18■□□□□ 0.5
MSH5-206ENST00000423982 UBE2Q2Q8WVN8 375 aa18.18■□□□□ 0.5
MSH5-206ENST00000423982 PTCH1Q13635 1447 aa18.18■□□□□ 0.5
MSH5-206ENST00000423982 PPIP5K1Q6PFW1 1433 aa18.17■□□□□ 0.5
MSH5-206ENST00000423982 MTHFSP49914 203 aa18.17■□□□□ 0.5
MSH5-206ENST00000423982 XRN1Q8IZH2 1706 aaKnown RBP18.17■□□□□ 0.5
MSH5-206ENST00000423982 NGEFQ8N5V2 710 aa18.16■□□□□ 0.5
MSH5-206ENST00000423982 TSR2Q969E8 191 aaKnown RBP18.16■□□□□ 0.5
MSH5-206ENST00000423982 PIK3R4Q99570 1358 aa18.16■□□□□ 0.5
MSH5-206ENST00000423982 GGNBP2Q9H3C7 697 aa18.16■□□□□ 0.5
MSH5-206ENST00000423982 CCDC61Q9Y6R9 512 aa18.16■□□□□ 0.5
MSH5-206ENST00000423982 RWDD1Q9H446 243 aaPredicted RBP18.15■□□□□ 0.5
MSH5-206ENST00000423982 TERF2IPQ9NYB0 399 aa18.15■□□□□ 0.5
MSH5-206ENST00000423982 ANKRD36BQ8N2N9 1353 aa18.15■□□□□ 0.5
MSH5-206ENST00000423982 MCM4P33991 863 aa18.15■□□□□ 0.5
MSH5-206ENST00000423982 L1TD1Q5T7N2 865 aaKnown RBP18.15■□□□□ 0.5
MSH5-206ENST00000423982 HDGFL2Q7Z4V5 671 aaPredicted RBP18.15■□□□□ 0.5
MSH5-206ENST00000423982 PHF23Q9BUL5 403 aaPredicted RBP18.15■□□□□ 0.5
MSH5-206ENST00000423982 IQSEC2Q5JU85 1478 aa18.14■□□□□ 0.5
MSH5-206ENST00000423982 CHD2O14647 1828 aaKnown RBP18.14■□□□□ 0.49
MSH5-206ENST00000423982 ZNF335Q9H4Z2 1342 aaPredicted RBP18.13■□□□□ 0.49
MSH5-206ENST00000423982 MVPQ14764 893 aaKnown RBP18.13■□□□□ 0.49
MSH5-206ENST00000423982 C22orf23Q9BZE7 217 aa18.13■□□□□ 0.49
MSH5-206ENST00000423982 GOLGA6L3A6NEY3 463 aa18.13■□□□□ 0.49
MSH5-206ENST00000423982 ATP7BP35670 1465 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms