RNA–Protein interactions for RNA: ENST00000423902.6

CHD7-201, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD7, Length 11,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-201ENST00000423902 KIF16BQ96L93 1317 aa10.36□□□□□ -0.75
CHD7-201ENST00000423902 NOS1P29475 1434 aa10.35□□□□□ -0.75
CHD7-201ENST00000423902 ELL2O00472 640 aaPredicted RBP10.35□□□□□ -0.75
CHD7-201ENST00000423902 BCL11BQ9C0K0 894 aaPredicted RBP10.35□□□□□ -0.75
CHD7-201ENST00000423902 RIMBP3CA6NJZ7 1639 aa10.35□□□□□ -0.75
CHD7-201ENST00000423902 RIMBP3BA6NNM3 1639 aa10.35□□□□□ -0.75
CHD7-201ENST00000423902 RIMBP3Q9UFD9 1639 aa10.35□□□□□ -0.75
CHD7-201ENST00000423902 HTATSF1O43719 755 aaKnown RBP10.35□□□□□ -0.75
CHD7-201ENST00000423902 SULT6B1Q6IMI4 303 aa10.35□□□□□ -0.75
CHD7-201ENST00000423902 SYNE3Q6ZMZ3 975 aa10.35□□□□□ -0.75
CHD7-201ENST00000423902 MAGI2Q86UL8 1455 aa10.35□□□□□ -0.75
CHD7-201ENST00000423902 MARCH6O60337 910 aa10.35□□□□□ -0.75
CHD7-201ENST00000423902 IFIT2P09913 472 aaKnown RBP10.35□□□□□ -0.75
CHD7-201ENST00000423902 SLC12A5Q9H2X9 1139 aa10.35□□□□□ -0.75
CHD7-201ENST00000423902 KIF3AQ9Y496 699 aa10.35□□□□□ -0.75
CHD7-201ENST00000423902 CCDC7Q96M83 1385 aa10.34□□□□□ -0.75
CHD7-201ENST00000423902 BTBD11A6QL63 1104 aa10.34□□□□□ -0.75
CHD7-201ENST00000423902 AK7Q96M32 723 aa10.34□□□□□ -0.75
CHD7-201ENST00000423902 NCBP3Q53F19 620 aaKnown RBP10.33□□□□□ -0.76
CHD7-201ENST00000423902 APPP05067 770 aa10.33□□□□□ -0.76
CHD7-201ENST00000423902 RUFY2Q8WXA3 655 aa10.33□□□□□ -0.76
CHD7-201ENST00000423902 RPRD2Q5VT52 1461 aaKnown RBP10.33□□□□□ -0.76
CHD7-201ENST00000423902 TRAPPC8Q9Y2L5 1435 aa10.33□□□□□ -0.76
CHD7-201ENST00000423902 RAD21O60216 631 aa10.33□□□□□ -0.76
CHD7-201ENST00000423902 B4GALNT3Q6L9W6 998 aa10.33□□□□□ -0.76
CHD7-201ENST00000423902 SHROOM2Q13796 1616 aa10.33□□□□□ -0.76
CHD7-201ENST00000423902 PREX2Q70Z35 1606 aa10.33□□□□□ -0.76
CHD7-201ENST00000423902 C11orf95C9JLR9 678 aaPredicted RBP10.32□□□□□ -0.76
CHD7-201ENST00000423902 NRDCO43847 1150 aa10.32□□□□□ -0.76
CHD7-201ENST00000423902 POLD1P28340 1107 aa10.32□□□□□ -0.76
CHD7-201ENST00000423902 NBPF1Q3BBV0 1214 aa10.32□□□□□ -0.76
CHD7-201ENST00000423902 SLC3A2P08195 630 aaKnown RBP10.32□□□□□ -0.76
CHD7-201ENST00000423902 TRDNQ13061 729 aa10.31□□□□□ -0.76
CHD7-201ENST00000423902 MPHOSPH8Q99549 860 aa10.31□□□□□ -0.76
CHD7-201ENST00000423902 A0A087WZG4 1122 aa10.31□□□□□ -0.76
CHD7-201ENST00000423902 CCDC27Q2M243 656 aa10.31□□□□□ -0.76
CHD7-201ENST00000423902 TTC21AQ8NDW8 1320 aa10.31□□□□□ -0.76
CHD7-201ENST00000423902 FAM177BA6PVY3 158 aa10.31□□□□□ -0.76
CHD7-201ENST00000423902 GNAT3A8MTJ3 354 aa10.31□□□□□ -0.76
CHD7-201ENST00000423902 TEX13AQ9BXU3 409 aaPredicted RBP10.31□□□□□ -0.76
CHD7-201ENST00000423902 NSD3Q9BZ95 1437 aa10.31□□□□□ -0.76
CHD7-201ENST00000423902 CNNM1Q9NRU3 951 aa10.31□□□□□ -0.76
CHD7-201ENST00000423902 CDC42BPAQ5VT25 1732 aa10.31□□□□□ -0.76
CHD7-201ENST00000423902 TBC1D2BQ9UPU7 963 aa10.3□□□□□ -0.76
CHD7-201ENST00000423902 GCC2Q8IWJ2 1684 aa10.3□□□□□ -0.76
CHD7-201ENST00000423902 PRKAR2BP31323 418 aa10.3□□□□□ -0.76
CHD7-201ENST00000423902 UBTFL1P0CB47 393 aaPredicted RBP10.3□□□□□ -0.76
CHD7-201ENST00000423902 DDX19BQ9UMR2 479 aa10.3□□□□□ -0.76
CHD7-201ENST00000423902 TRPM2O94759 1503 aa10.3□□□□□ -0.76
CHD7-201ENST00000423902 SCAF11Q99590 1463 aaKnown RBP10.3□□□□□ -0.76
CHD7-201ENST00000423902 ERICH2A1L162 156 aa10.3□□□□□ -0.76
CHD7-201ENST00000423902 HSP90AB3PQ58FF7 597 aa10.3□□□□□ -0.76
CHD7-201ENST00000423902 TTC21BQ7Z4L5 1316 aa10.3□□□□□ -0.76
CHD7-201ENST00000423902 C16orf71Q8IYS4 520 aaPredicted RBP10.3□□□□□ -0.76
CHD7-201ENST00000423902 DIAPH3Q9NSV4 1193 aa10.3□□□□□ -0.76
CHD7-201ENST00000423902 ABCA8O94911 1581 aa10.3□□□□□ -0.76
CHD7-201ENST00000423902 APAF1O14727 1248 aa10.3□□□□□ -0.76
CHD7-201ENST00000423902 MPRIPQ6WCQ1 1025 aa10.3□□□□□ -0.76
CHD7-201ENST00000423902 RASSF8Q8NHQ8 419 aa10.3□□□□□ -0.76
CHD7-201ENST00000423902 HDGFL1Q5TGJ6 251 aa10.29□□□□□ -0.76
CHD7-201ENST00000423902 CPLX2Q6PUV4 134 aaKnown RBP10.29□□□□□ -0.76
CHD7-201ENST00000423902 ERC2O15083 957 aa10.29□□□□□ -0.76
CHD7-201ENST00000423902 SMARCC1Q92922 1105 aaPredicted RBP10.29□□□□□ -0.76
CHD7-201ENST00000423902 CLUAP1Q96AJ1 413 aa10.29□□□□□ -0.76
CHD7-201ENST00000423902 RRS1Q15050 365 aaKnown RBP10.29□□□□□ -0.76
CHD7-201ENST00000423902 KIF7Q2M1P5 1343 aa10.29□□□□□ -0.76
CHD7-201ENST00000423902 RPGRQ92834 1020 aaKnown RBP10.28□□□□□ -0.76
CHD7-201ENST00000423902 CDCA7Q9BWT1 371 aaPredicted RBP10.28□□□□□ -0.76
CHD7-201ENST00000423902 PLIN1O60240 522 aa10.28□□□□□ -0.76
CHD7-201ENST00000423902 C14orf93Q9H972 538 aaKnown RBP10.28□□□□□ -0.76
CHD7-201ENST00000423902 KCNA6P17658 529 aa10.28□□□□□ -0.76
CHD7-201ENST00000423902 MFAP1P55081 439 aaKnown RBP10.28□□□□□ -0.76
CHD7-201ENST00000423902 CCDC57Q2TAC2 916 aa10.28□□□□□ -0.76
CHD7-201ENST00000423902 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.28□□□□□ -0.764e-6■■□□□ 12.4
CHD7-201ENST00000423902 ARHGEF5Q12774 1597 aa10.28□□□□□ -0.76
CHD7-201ENST00000423902 TPRNQ4KMQ1 711 aa10.28□□□□□ -0.76
CHD7-201ENST00000423902 ERC1Q8IUD2 1116 aa10.28□□□□□ -0.76
CHD7-201ENST00000423902 RFC4P35249 363 aa10.28□□□□□ -0.76
CHD7-201ENST00000423902 IGHMBP2P38935 993 aaKnown RBP10.27□□□□□ -0.76
CHD7-201ENST00000423902 BRD4O60885 1362 aaPredicted RBP10.27□□□□□ -0.76
CHD7-201ENST00000423902 TMOD2Q9NZR1 351 aa10.27□□□□□ -0.76
CHD7-201ENST00000423902 DHX16O60231 1041 aaKnown RBP10.27□□□□□ -0.77
CHD7-201ENST00000423902 RILPL2Q969X0 211 aa10.27□□□□□ -0.77
CHD7-201ENST00000423902 MYL6BP14649 208 aa10.27□□□□□ -0.77
CHD7-201ENST00000423902 PRKRIP1Q9H875 184 aaPredicted RBP10.27□□□□□ -0.77
CHD7-201ENST00000423902 TBX22Q9Y458 520 aa10.27□□□□□ -0.77
CHD7-201ENST00000423902 NSD2O96028 1365 aa10.26□□□□□ -0.77
CHD7-201ENST00000423902 RBM5P52756 815 aaKnown RBP eCLIP10.26□□□□□ -0.772e-6■■■■□ 22.7
CHD7-201ENST00000423902 ST5P78524 1137 aa10.26□□□□□ -0.77
CHD7-201ENST00000423902 DDB1Q16531 1140 aa10.26□□□□□ -0.77
CHD7-201ENST00000423902 ARHGEF10O15013 1369 aa10.26□□□□□ -0.77
CHD7-201ENST00000423902 ERICH6BQ5W0A0 696 aa10.26□□□□□ -0.77
CHD7-201ENST00000423902 RNF20Q5VTR2 975 aa10.26□□□□□ -0.77
CHD7-201ENST00000423902 NEUROD6Q96NK8 337 aa10.26□□□□□ -0.77
CHD7-201ENST00000423902 GNAI3P08754 354 aa10.26□□□□□ -0.77
CHD7-201ENST00000423902 KDM5DQ9BY66 1539 aa10.26□□□□□ -0.77
CHD7-201ENST00000423902 KDM5CP41229 1560 aa10.25□□□□□ -0.77
CHD7-201ENST00000423902 CCDC43Q96MW1 224 aaKnown RBP10.25□□□□□ -0.77
CHD7-201ENST00000423902 FCHSD2O94868 740 aa10.25□□□□□ -0.77
CHD7-201ENST00000423902 CSPP1Q1MSJ5 1256 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms