RNA–Protein interactions for RNA: ENST00000421182.5

FN1-207, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,103 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-207ENST00000421182 ATAD2Q6PL18 1390 aa13.38□□□□□ -0.27
FN1-207ENST00000421182 APAF1O14727 1248 aa13.38□□□□□ -0.27
FN1-207ENST00000421182 WASHC4Q2M389 1173 aa13.38□□□□□ -0.27
FN1-207ENST00000421182 PCF11O94913 1555 aaKnown RBP13.38□□□□□ -0.27
FN1-207ENST00000421182 NECTIN2Q92692 538 aa13.38□□□□□ -0.27
FN1-207ENST00000421182 STRN4Q9NRL3 753 aa13.38□□□□□ -0.27
FN1-207ENST00000421182 ZSCAN25Q6NSZ9 544 aa13.37□□□□□ -0.27
FN1-207ENST00000421182 PLB1Q6P1J6 1458 aa13.37□□□□□ -0.27
FN1-207ENST00000421182 RTEL1-TNFRSF6BF6WH68 1400 aa13.37□□□□□ -0.27
FN1-207ENST00000421182 MYO6Q9UM54 1294 aa13.37□□□□□ -0.27
FN1-207ENST00000421182 CT47B1P0C2W7 299 aaPredicted RBP13.37□□□□□ -0.27
FN1-207ENST00000421182 PDCP20941 246 aa13.37□□□□□ -0.27
FN1-207ENST00000421182 CCDC158Q5M9N0 1113 aa13.37□□□□□ -0.27
FN1-207ENST00000421182 KIF7Q2M1P5 1343 aa13.37□□□□□ -0.27
FN1-207ENST00000421182 NUCB2P80303 420 aa13.37□□□□□ -0.27
FN1-207ENST00000421182 KCNH5Q8NCM2 988 aa13.37□□□□□ -0.27
FN1-207ENST00000421182 SMC3Q9UQE7 1217 aa13.37□□□□□ -0.27
FN1-207ENST00000421182 AKNAQ7Z591 1439 aa13.37□□□□□ -0.27
FN1-207ENST00000421182 KIAA1107Q9UPP5 1409 aa13.36□□□□□ -0.27
FN1-207ENST00000421182 AIMP1Q12904 312 aaKnown RBP13.36□□□□□ -0.27
FN1-207ENST00000421182 BCL2L13Q9BXK5 485 aa13.36□□□□□ -0.27
FN1-207ENST00000421182 PDE4CQ08493 712 aa13.36□□□□□ -0.27
FN1-207ENST00000421182 HMOX1P09601 288 aa13.36□□□□□ -0.27
FN1-207ENST00000421182 KIF1BO60333 1816 aa13.36□□□□□ -0.27
FN1-207ENST00000421182 MCM2P49736 904 aa13.36□□□□□ -0.27
FN1-207ENST00000421182 CCDC173Q0VFZ6 552 aa13.36□□□□□ -0.27
FN1-207ENST00000421182 CNNM1Q9NRU3 951 aa13.36□□□□□ -0.27
FN1-207ENST00000421182 NACAP1Q9BZK3 213 aa13.35□□□□□ -0.27
FN1-207ENST00000421182 CABP2Q9NPB3 220 aa13.35□□□□□ -0.27
FN1-207ENST00000421182 NUTM2BA6NNL0 878 aaPredicted RBP13.35□□□□□ -0.27
FN1-207ENST00000421182 NUTM2EB1AL46 878 aaPredicted RBP13.35□□□□□ -0.27
FN1-207ENST00000421182 NUTM2AQ8IVF1 878 aaPredicted RBP13.35□□□□□ -0.27
FN1-207ENST00000421182 OLFM4Q6UX06 510 aa13.35□□□□□ -0.27
FN1-207ENST00000421182 CCDC73Q6ZRK6 1079 aa13.35□□□□□ -0.27
FN1-207ENST00000421182 WDR97A6NE52 1622 aa13.35□□□□□ -0.27
FN1-207ENST00000421182 CDR1P51861 262 aa13.35□□□□□ -0.27
FN1-207ENST00000421182 SETQ01105 290 aaPredicted RBP13.35□□□□□ -0.27
FN1-207ENST00000421182 EIF4G3O43432 1585 aaKnown RBP13.35□□□□□ -0.27
FN1-207ENST00000421182 TRIM21P19474 475 aaKnown RBP13.35□□□□□ -0.27
FN1-207ENST00000421182 SASS6Q6UVJ0 657 aa13.34□□□□□ -0.27
FN1-207ENST00000421182 BICD2Q8TD16 824 aa13.34□□□□□ -0.27
FN1-207ENST00000421182 RAPGEF3O95398 923 aa13.34□□□□□ -0.27
FN1-207ENST00000421182 PRAM1Q96QH2 718 aa13.34□□□□□ -0.27
FN1-207ENST00000421182 RBM19Q9Y4C8 960 aaKnown RBP13.34□□□□□ -0.27
FN1-207ENST00000421182 DDX49Q9Y6V7 483 aaKnown RBP13.34□□□□□ -0.27
FN1-207ENST00000421182 ERBINQ96RT1 1412 aa13.34□□□□□ -0.27
FN1-207ENST00000421182 PRDM11Q9NQV5 511 aa13.34□□□□□ -0.27
FN1-207ENST00000421182 CCT4P50991 539 aaKnown RBP13.34□□□□□ -0.27
FN1-207ENST00000421182 CDK5RAP3Q96JB5 506 aa13.34□□□□□ -0.27
FN1-207ENST00000421182 CHD1O14646 1710 aa13.34□□□□□ -0.27
FN1-207ENST00000421182 MPHOSPH8Q99549 860 aa13.34□□□□□ -0.27
FN1-207ENST00000421182 DNAI2Q9GZS0 605 aa13.34□□□□□ -0.27
FN1-207ENST00000421182 ZNF287Q9HBT7 754 aa13.33□□□□□ -0.27
FN1-207ENST00000421182 ARHGEF11O15085 1522 aa13.33□□□□□ -0.27
FN1-207ENST00000421182 STARD3NLO95772 234 aa13.33□□□□□ -0.28
FN1-207ENST00000421182 RBM42Q9BTD8 480 aaKnown RBP13.33□□□□□ -0.28
FN1-207ENST00000421182 MTHFSP49914 203 aa13.33□□□□□ -0.28
FN1-207ENST00000421182 TMEM132AQ24JP5 1023 aa13.33□□□□□ -0.28
FN1-207ENST00000421182 PPP1R1BQ9UD71 204 aaPredicted RBP13.33□□□□□ -0.28
FN1-207ENST00000421182 GNAI2P04899 355 aa13.32□□□□□ -0.28
FN1-207ENST00000421182 PIP4K2AP48426 406 aaPredicted RBP13.32□□□□□ -0.28
FN1-207ENST00000421182 CDK13Q14004 1512 aaKnown RBP13.32□□□□□ -0.28
FN1-207ENST00000421182 URB2Q14146 1524 aaKnown RBP13.32□□□□□ -0.28
FN1-207ENST00000421182 COG6Q9Y2V7 657 aa13.32□□□□□ -0.28
FN1-207ENST00000421182 PLIN1O60240 522 aa13.32□□□□□ -0.28
FN1-207ENST00000421182 TTC39AQ5SRH9 613 aa13.32□□□□□ -0.28
FN1-207ENST00000421182 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.32□□□□□ -0.28
FN1-207ENST00000421182 CDK19Q9BWU1 502 aa13.32□□□□□ -0.28
FN1-207ENST00000421182 ZNF644Q9H582 1327 aaPredicted RBP13.32□□□□□ -0.28
FN1-207ENST00000421182 FYB1O15117 783 aa13.31□□□□□ -0.28
FN1-207ENST00000421182 CCDC57Q2TAC2 916 aa13.31□□□□□ -0.28
FN1-207ENST00000421182 NUTM2GQ5VZR2 741 aa13.31□□□□□ -0.28
FN1-207ENST00000421182 DHX8Q14562 1220 aaKnown RBP13.31□□□□□ -0.28
FN1-207ENST00000421182 ANKRD1Q15327 319 aa13.31□□□□□ -0.28
FN1-207ENST00000421182 PPP6R1Q9UPN7 881 aa13.31□□□□□ -0.28
FN1-207ENST00000421182 FANCAO15360 1455 aa13.31□□□□□ -0.28
FN1-207ENST00000421182 OFD1O75665 1012 aa13.31□□□□□ -0.28
FN1-207ENST00000421182 DENND4BO75064 1496 aaPredicted RBP13.3□□□□□ -0.28
FN1-207ENST00000421182 PDIA4P13667 645 aaKnown RBP13.3□□□□□ -0.28
FN1-207ENST00000421182 JMYQ8N9B5 988 aa13.3□□□□□ -0.28
FN1-207ENST00000421182 SRCIN1Q9C0H9 1055 aa13.3□□□□□ -0.28
FN1-207ENST00000421182 LETM1O95202 739 aaPredicted RBP13.29□□□□□ -0.28
FN1-207ENST00000421182 TXLNBQ8N3L3 684 aa13.29□□□□□ -0.28
FN1-207ENST00000421182 FSD1Q9BTV5 496 aa13.29□□□□□ -0.28
FN1-207ENST00000421182 GGNBP2Q9H3C7 697 aa13.29□□□□□ -0.28
FN1-207ENST00000421182 CHMP5Q9NZZ3 219 aa13.29□□□□□ -0.28
FN1-207ENST00000421182 SAMD1Q6SPF0 538 aaPredicted RBP13.29□□□□□ -0.28
FN1-207ENST00000421182 ZNF428Q96B54 188 aa13.29□□□□□ -0.28
FN1-207ENST00000421182 CRBNQ96SW2 442 aa13.29□□□□□ -0.28
FN1-207ENST00000421182 FOXD4L1Q9NU39 408 aa13.29□□□□□ -0.28
FN1-207ENST00000421182 TMOD2Q9NZR1 351 aa13.29□□□□□ -0.28
FN1-207ENST00000421182 SYCP1Q15431 976 aa13.29□□□□□ -0.28
FN1-207ENST00000421182 TMEM132EQ6IEE7 984 aa13.29□□□□□ -0.28
FN1-207ENST00000421182 DESP17661 470 aa13.28□□□□□ -0.28
FN1-207ENST00000421182 CAMSAP2Q08AD1 1489 aa13.28□□□□□ -0.28
FN1-207ENST00000421182 LUC7LQ9NQ29 371 aaKnown RBP13.28□□□□□ -0.28
FN1-207ENST00000421182 CDC45O75419 566 aa13.28□□□□□ -0.28
FN1-207ENST00000421182 HDGFL1Q5TGJ6 251 aa13.28□□□□□ -0.28
FN1-207ENST00000421182 TRIM22Q8IYM9 498 aa13.28□□□□□ -0.28
FN1-207ENST00000421182 FOXD4L5Q5VV16 416 aaPredicted RBP13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms