RNA–Protein interactions for RNA: ENST00000419964.1

EPHA4-205, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 552 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-205ENST00000419964 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.62□□□□□ -0.71
EPHA4-205ENST00000419964 LIMD1Q9UGP4 676 aa10.62□□□□□ -0.71
EPHA4-205ENST00000419964 TSR3Q9UJK0 312 aaKnown RBP10.62□□□□□ -0.71
EPHA4-205ENST00000419964 HPS5Q9UPZ3 1129 aa10.62□□□□□ -0.71
EPHA4-205ENST00000419964 NCOA2Q15596 1464 aa10.61□□□□□ -0.71
EPHA4-205ENST00000419964 FGD6Q6ZV73 1430 aa10.61□□□□□ -0.71
EPHA4-205ENST00000419964 BCAMP50895 628 aa10.61□□□□□ -0.71
EPHA4-205ENST00000419964 ARHGEF11O15085 1522 aa10.6□□□□□ -0.71
EPHA4-205ENST00000419964 NDUFV2P19404 249 aa10.6□□□□□ -0.71
EPHA4-205ENST00000419964 ATP6V1AP38606 617 aa10.6□□□□□ -0.71
EPHA4-205ENST00000419964 FUT2Q10981 343 aa10.6□□□□□ -0.71
EPHA4-205ENST00000419964 MIA2Q96PC5 1412 aa10.59□□□□□ -0.71
EPHA4-205ENST00000419964 LRRIQ1Q96JM4 1722 aa10.59□□□□□ -0.71
EPHA4-205ENST00000419964 ACTN4O43707 911 aaKnown RBP10.58□□□□□ -0.72
EPHA4-205ENST00000419964 FDX1P10109 184 aa10.58□□□□□ -0.72
EPHA4-205ENST00000419964 FAM50AQ14320 339 aaKnown RBP10.58□□□□□ -0.72
EPHA4-205ENST00000419964 SETD5Q9C0A6 1442 aa10.58□□□□□ -0.72
EPHA4-205ENST00000419964 NUP153P49790 1475 aaKnown RBP10.57□□□□□ -0.72
EPHA4-205ENST00000419964 CSPP1Q1MSJ5 1256 aa10.56□□□□□ -0.72
EPHA4-205ENST00000419964 PRPF38BQ5VTL8 546 aaKnown RBP10.56□□□□□ -0.72
EPHA4-205ENST00000419964 THSD4Q6ZMP0 1018 aa10.56□□□□□ -0.72
EPHA4-205ENST00000419964 C14orf37Q86TY3 774 aa10.56□□□□□ -0.72
EPHA4-205ENST00000419964 KCTD12Q96CX2 325 aaKnown RBP10.56□□□□□ -0.72
EPHA4-205ENST00000419964 CHD1O14646 1710 aa10.55□□□□□ -0.72
EPHA4-205ENST00000419964 TCOF1Q13428 1488 aaKnown RBP10.55□□□□□ -0.72
EPHA4-205ENST00000419964 PPP2R2DQ66LE6 453 aa10.55□□□□□ -0.72
EPHA4-205ENST00000419964 PCDH10Q9P2E7 1040 aa10.55□□□□□ -0.72
EPHA4-205ENST00000419964 PCDHB15Q9Y5E8 787 aa10.55□□□□□ -0.72
EPHA4-205ENST00000419964 SHROOM2Q13796 1616 aa10.55□□□□□ -0.72
EPHA4-205ENST00000419964 NUTM2BA6NNL0 878 aaPredicted RBP10.54□□□□□ -0.72
EPHA4-205ENST00000419964 NUTM2EB1AL46 878 aaPredicted RBP10.54□□□□□ -0.72
EPHA4-205ENST00000419964 LILRB3O75022 631 aa10.54□□□□□ -0.72
EPHA4-205ENST00000419964 FLIIQ13045 1269 aa10.54□□□□□ -0.72
EPHA4-205ENST00000419964 NUTM2DQ5VT03 806 aaPredicted RBP10.54□□□□□ -0.72
EPHA4-205ENST00000419964 NUTM2AQ8IVF1 878 aaPredicted RBP10.54□□□□□ -0.72
EPHA4-205ENST00000419964 ZBTB3Q9H5J0 574 aa10.54□□□□□ -0.72
EPHA4-205ENST00000419964 WBP1LQ9NX94 342 aa10.54□□□□□ -0.72
EPHA4-205ENST00000419964 PTPN23Q9H3S7 1636 aa10.54□□□□□ -0.72
EPHA4-205ENST00000419964 CDK13Q14004 1512 aaKnown RBP10.53□□□□□ -0.72
EPHA4-205ENST00000419964 DHX57Q6P158 1386 aaKnown RBP10.53□□□□□ -0.72
EPHA4-205ENST00000419964 TROQ12816 1431 aaPredicted RBP10.53□□□□□ -0.72
EPHA4-205ENST00000419964 PRG4Q92954 1404 aaPredicted RBP10.53□□□□□ -0.72
EPHA4-205ENST00000419964 RFC5P40937 340 aa10.53□□□□□ -0.72
EPHA4-205ENST00000419964 APLP1P51693 650 aa10.53□□□□□ -0.72
EPHA4-205ENST00000419964 GUCA2AQ02747 115 aa10.53□□□□□ -0.72
EPHA4-205ENST00000419964 NYAP1Q6ZVC0 841 aa10.53□□□□□ -0.72
EPHA4-205ENST00000419964 HLA-CQ95604 372 aa10.53□□□□□ -0.72
EPHA4-205ENST00000419964 TIMELESSQ9UNS1 1208 aa10.53□□□□□ -0.72
EPHA4-205ENST00000419964 MAGI3Q5TCQ9 1506 aa10.53□□□□□ -0.72
EPHA4-205ENST00000419964 RAB3GAP2Q9H2M9 1393 aa10.52□□□□□ -0.72
EPHA4-205ENST00000419964 ABCA8O94911 1581 aa10.52□□□□□ -0.72
EPHA4-205ENST00000419964 PTPRGP23470 1445 aa10.52□□□□□ -0.73
EPHA4-205ENST00000419964 AKNAQ7Z591 1439 aa10.52□□□□□ -0.73
EPHA4-205ENST00000419964 ADCY10Q96PN6 1610 aa10.52□□□□□ -0.73
EPHA4-205ENST00000419964 QPCTQ16769 361 aa10.52□□□□□ -0.73
EPHA4-205ENST00000419964 TMEM259Q4ZIN3 620 aa10.52□□□□□ -0.73
EPHA4-205ENST00000419964 MORN1Q5T089 497 aa10.52□□□□□ -0.73
EPHA4-205ENST00000419964 PCDHGC3Q9UN70 934 aa10.52□□□□□ -0.73
EPHA4-205ENST00000419964 ITSN2Q9NZM3 1697 aa10.52□□□□□ -0.73
EPHA4-205ENST00000419964 HFM1A2PYH4 1435 aa10.51□□□□□ -0.73
EPHA4-205ENST00000419964 SPDYE5A6NIY4 337 aa10.51□□□□□ -0.73
EPHA4-205ENST00000419964 ITGAEP38570 1179 aa10.51□□□□□ -0.73
EPHA4-205ENST00000419964 MTMR2Q13614 643 aa10.51□□□□□ -0.73
EPHA4-205ENST00000419964 Q3C1V9 767 aa10.51□□□□□ -0.73
EPHA4-205ENST00000419964 MYT1LQ9UL68 1186 aa10.51□□□□□ -0.73
EPHA4-205ENST00000419964 PCDHB3Q9Y5E6 796 aa10.51□□□□□ -0.73
EPHA4-205ENST00000419964 PLB1Q6P1J6 1458 aa10.5□□□□□ -0.73
EPHA4-205ENST00000419964 PUS10Q3MIT2 529 aaKnown RBP10.5□□□□□ -0.73
EPHA4-205ENST00000419964 CABLES1Q8TDN4 633 aa10.5□□□□□ -0.73
EPHA4-205ENST00000419964 PLEKHD1A6NEE1 506 aa10.49□□□□□ -0.73
EPHA4-205ENST00000419964 C6orf229H3BNL8 230 aa10.49□□□□□ -0.73
EPHA4-205ENST00000419964 NR1I2O75469 434 aa10.49□□□□□ -0.73
EPHA4-205ENST00000419964 BANK1Q8NDB2 785 aa10.49□□□□□ -0.73
EPHA4-205ENST00000419964 SLC27A5Q9Y2P5 690 aa10.49□□□□□ -0.73
EPHA4-205ENST00000419964 KIF14Q15058 1648 aa10.48□□□□□ -0.73
EPHA4-205ENST00000419964 RTL5Q5HYW3 569 aaPredicted RBP10.48□□□□□ -0.73
EPHA4-205ENST00000419964 CLASP1Q7Z460 1538 aa10.48□□□□□ -0.73
EPHA4-205ENST00000419964 FBXO31Q5XUX0 539 aaPredicted RBP10.47□□□□□ -0.73
EPHA4-205ENST00000419964 UACAQ9BZF9 1416 aa10.47□□□□□ -0.73
EPHA4-205ENST00000419964 PTPN5P54829 565 aa10.46□□□□□ -0.73
EPHA4-205ENST00000419964 SALL2Q9Y467 1007 aaPredicted RBP10.46□□□□□ -0.73
EPHA4-205ENST00000419964 ROCK1Q13464 1354 aa10.46□□□□□ -0.74
EPHA4-205ENST00000419964 SCUBE3Q8IX30 993 aa10.45□□□□□ -0.74
EPHA4-205ENST00000419964 GCC2Q8IWJ2 1684 aa10.44□□□□□ -0.74
EPHA4-205ENST00000419964 ATP10BO94823 1461 aa10.44□□□□□ -0.74
EPHA4-205ENST00000419964 AP1G2O75843 785 aa10.44□□□□□ -0.74
EPHA4-205ENST00000419964 MCM6Q14566 821 aa10.44□□□□□ -0.74
EPHA4-205ENST00000419964 BLOC1S3Q6QNY0 202 aa10.44□□□□□ -0.74
EPHA4-205ENST00000419964 RETREG3Q86VR2 466 aa10.44□□□□□ -0.74
EPHA4-205ENST00000419964 HELBQ8NG08 1087 aaPredicted RBP10.44□□□□□ -0.74
EPHA4-205ENST00000419964 DNMT1P26358 1616 aaKnown RBP10.44□□□□□ -0.74
EPHA4-205ENST00000419964 ABCC2Q92887 1545 aa10.43□□□□□ -0.74
EPHA4-205ENST00000419964 UHRF1BP1LA0JNW5 1464 aa10.43□□□□□ -0.74
EPHA4-205ENST00000419964 NAIPQ13075 1403 aa10.43□□□□□ -0.74
EPHA4-205ENST00000419964 FMNL1O95466 1100 aaPredicted RBP10.42□□□□□ -0.74
EPHA4-205ENST00000419964 BRICD5Q6PL45 260 aa10.42□□□□□ -0.74
EPHA4-205ENST00000419964 SYMPKQ92797 1274 aaKnown RBP10.42□□□□□ -0.74
EPHA4-205ENST00000419964 CFDP1Q9UEE9 299 aaPredicted RBP10.42□□□□□ -0.74
EPHA4-205ENST00000419964 DAPK1P53355 1430 aa10.41□□□□□ -0.74
EPHA4-205ENST00000419964 PRR7Q8TB68 274 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms