RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 DIAPH3Q9NSV4 1193 aa20.84■□□□□ 0.93
SYNGAP1-202ENST00000418600 MPHOSPH8Q99549 860 aa20.84■□□□□ 0.93
SYNGAP1-202ENST00000418600 C19orf44Q9H6X5 657 aa20.83■□□□□ 0.93
SYNGAP1-202ENST00000418600 PPP4R2Q9NY27 417 aa20.83■□□□□ 0.93
SYNGAP1-202ENST00000418600 ATP10BO94823 1461 aa20.83■□□□□ 0.93
SYNGAP1-202ENST00000418600 TBC1D2BQ9UPU7 963 aa20.83■□□□□ 0.92
SYNGAP1-202ENST00000418600 ZMYM3Q14202 1370 aa20.83■□□□□ 0.92
SYNGAP1-202ENST00000418600 CCDC43Q96MW1 224 aaKnown RBP20.82■□□□□ 0.92
SYNGAP1-202ENST00000418600 TMOD2Q9NZR1 351 aa20.82■□□□□ 0.92
SYNGAP1-202ENST00000418600 RFC4P35249 363 aa20.82■□□□□ 0.92
SYNGAP1-202ENST00000418600 NBPF1Q3BBV0 1214 aa20.82■□□□□ 0.92
SYNGAP1-202ENST00000418600 ABCC10Q5T3U5 1492 aa20.81■□□□□ 0.92
SYNGAP1-202ENST00000418600 RIMS2Q9UQ26 1411 aa20.81■□□□□ 0.92
SYNGAP1-202ENST00000418600 UBTFL1P0CB47 393 aaPredicted RBP20.81■□□□□ 0.92
SYNGAP1-202ENST00000418600 TRDNQ13061 729 aa20.81■□□□□ 0.92
SYNGAP1-202ENST00000418600 CHRNA2Q15822 529 aa20.81■□□□□ 0.92
SYNGAP1-202ENST00000418600 SLC4A3P48751 1232 aa20.8■□□□□ 0.92
SYNGAP1-202ENST00000418600 PTCD1O75127 700 aaKnown RBP20.79■□□□□ 0.92
SYNGAP1-202ENST00000418600 WASHC4Q2M389 1173 aa20.79■□□□□ 0.92
SYNGAP1-202ENST00000418600 ATP10AO60312 1499 aa20.79■□□□□ 0.92
SYNGAP1-202ENST00000418600 PLCB2Q00722 1185 aa20.79■□□□□ 0.92
SYNGAP1-202ENST00000418600 PTPN23Q9H3S7 1636 aa20.79■□□□□ 0.92
SYNGAP1-202ENST00000418600 ERICH6BQ5W0A0 696 aa20.79■□□□□ 0.92
SYNGAP1-202ENST00000418600 CHMP4CQ96CF2 233 aa20.79■□□□□ 0.92
SYNGAP1-202ENST00000418600 PBRM1Q86U86 1689 aa20.79■□□□□ 0.92
SYNGAP1-202ENST00000418600 AMOTQ4VCS5 1084 aa20.78■□□□□ 0.92
SYNGAP1-202ENST00000418600 KIF3AQ9Y496 699 aa20.78■□□□□ 0.92
SYNGAP1-202ENST00000418600 IGHMBP2P38935 993 aaKnown RBP20.78■□□□□ 0.92
SYNGAP1-202ENST00000418600 ZNF622Q969S3 477 aaKnown RBP eCLIP20.78■□□□□ 0.921e-6■■■■□ 21.4
SYNGAP1-202ENST00000418600 STK32BQ9NY57 414 aa20.78■□□□□ 0.92
SYNGAP1-202ENST00000418600 SLC3A2P08195 630 aaKnown RBP20.77■□□□□ 0.92
SYNGAP1-202ENST00000418600 AMER1Q5JTC6 1135 aaPredicted RBP20.77■□□□□ 0.92
SYNGAP1-202ENST00000418600 KIAA0556O60303 1618 aa20.77■□□□□ 0.92
SYNGAP1-202ENST00000418600 DDB1Q16531 1140 aa20.77■□□□□ 0.92
SYNGAP1-202ENST00000418600 RUFY2Q8WXA3 655 aa20.77■□□□□ 0.92
SYNGAP1-202ENST00000418600 A0A087WZG4 1122 aa20.77■□□□□ 0.92
SYNGAP1-202ENST00000418600 ST5P78524 1137 aa20.77■□□□□ 0.92
SYNGAP1-202ENST00000418600 TTC39AQ5SRH9 613 aa20.77■□□□□ 0.92
SYNGAP1-202ENST00000418600 NFXL1Q6ZNB6 911 aa20.77■□□□□ 0.92
SYNGAP1-202ENST00000418600 PRM3Q9NNZ6 103 aa20.77■□□□□ 0.92
SYNGAP1-202ENST00000418600 HDGFL1Q5TGJ6 251 aa20.76■□□□□ 0.91
SYNGAP1-202ENST00000418600 ZSCAN29Q8IWY8 852 aaPredicted RBP20.76■□□□□ 0.91
SYNGAP1-202ENST00000418600 NOS1P29475 1434 aa20.76■□□□□ 0.91
SYNGAP1-202ENST00000418600 USHBP1Q8N6Y0 703 aa20.76■□□□□ 0.91
SYNGAP1-202ENST00000418600 ACSBG1Q96GR2 724 aa20.76■□□□□ 0.91
SYNGAP1-202ENST00000418600 KIAA2012Q0VF49 1180 aa20.75■□□□□ 0.91
SYNGAP1-202ENST00000418600 CLEC11AQ9Y240 323 aa20.75■□□□□ 0.91
SYNGAP1-202ENST00000418600 GNAT3A8MTJ3 354 aa20.75■□□□□ 0.91
SYNGAP1-202ENST00000418600 CEP170Q5SW79 1584 aa20.74■□□□□ 0.91
SYNGAP1-202ENST00000418600 ANKRD45Q5TZF3 282 aa20.73■□□□□ 0.91
SYNGAP1-202ENST00000418600 CCDC57Q2TAC2 916 aa20.73■□□□□ 0.91
SYNGAP1-202ENST00000418600 TFCP2L1Q9NZI6 479 aa20.73■□□□□ 0.91
SYNGAP1-202ENST00000418600 ABCC5O15440 1437 aa20.73■□□□□ 0.91
SYNGAP1-202ENST00000418600 KIF16BQ96L93 1317 aa20.73■□□□□ 0.91
SYNGAP1-202ENST00000418600 CHAF1AQ13111 956 aaPredicted RBP20.72■□□□□ 0.91
SYNGAP1-202ENST00000418600 SYCP2Q9BX26 1530 aa20.72■□□□□ 0.91
SYNGAP1-202ENST00000418600 ERC2O15083 957 aa20.72■□□□□ 0.91
SYNGAP1-202ENST00000418600 CPLX2Q6PUV4 134 aaKnown RBP20.72■□□□□ 0.91
SYNGAP1-202ENST00000418600 ANKIB1Q9P2G1 1089 aa20.72■□□□□ 0.91
SYNGAP1-202ENST00000418600 MTMR7Q9Y216 660 aa20.72■□□□□ 0.91
SYNGAP1-202ENST00000418600 THOC2Q8NI27 1593 aaKnown RBP20.72■□□□□ 0.91
SYNGAP1-202ENST00000418600 BAG6P46379 1132 aa20.72■□□□□ 0.91
SYNGAP1-202ENST00000418600 CCDC158Q5M9N0 1113 aa20.72■□□□□ 0.91
SYNGAP1-202ENST00000418600 DUOX2Q9NRD8 1548 aa20.71■□□□□ 0.91
SYNGAP1-202ENST00000418600 NOL8Q76FK4 1167 aaKnown RBP20.71■□□□□ 0.91
SYNGAP1-202ENST00000418600 ANKRD24Q8TF21 1146 aa20.71■□□□□ 0.91
SYNGAP1-202ENST00000418600 ITSN2Q9NZM3 1697 aa20.71■□□□□ 0.91
SYNGAP1-202ENST00000418600 ATP2B2Q01814 1243 aa20.7■□□□□ 0.9
SYNGAP1-202ENST00000418600 TRIM29Q14134 588 aa20.7■□□□□ 0.9
SYNGAP1-202ENST00000418600 USP21Q9UK80 565 aa20.7■□□□□ 0.9
SYNGAP1-202ENST00000418600 GRM1Q13255 1194 aa20.69■□□□□ 0.9
SYNGAP1-202ENST00000418600 SMARCC1Q92922 1105 aaPredicted RBP20.69■□□□□ 0.9
SYNGAP1-202ENST00000418600 ZFYVE16Q7Z3T8 1539 aa20.69■□□□□ 0.9
SYNGAP1-202ENST00000418600 CTTNBP2Q8WZ74 1663 aa20.69■□□□□ 0.9
SYNGAP1-202ENST00000418600 DDX19BQ9UMR2 479 aa20.68■□□□□ 0.9
SYNGAP1-202ENST00000418600 PARP3Q9Y6F1 533 aa20.68■□□□□ 0.9
SYNGAP1-202ENST00000418600 MFAP1P55081 439 aaKnown RBP20.67■□□□□ 0.9
SYNGAP1-202ENST00000418600 NME9Q86XW9 330 aa20.67■□□□□ 0.9
SYNGAP1-202ENST00000418600 TEX13AQ9BXU3 409 aaPredicted RBP20.67■□□□□ 0.9
SYNGAP1-202ENST00000418600 NUP160Q12769 1436 aa20.67■□□□□ 0.9
SYNGAP1-202ENST00000418600 UGGT2Q9NYU1 1516 aa20.66■□□□□ 0.9
SYNGAP1-202ENST00000418600 HSP90AB3PQ58FF7 597 aa20.66■□□□□ 0.9
SYNGAP1-202ENST00000418600 IFNL2Q8IZJ0 200 aa20.66■□□□□ 0.9
SYNGAP1-202ENST00000418600 ADGRF5Q8IZF2 1346 aa20.66■□□□□ 0.9
SYNGAP1-202ENST00000418600 WDR97A6NE52 1622 aa20.66■□□□□ 0.9
SYNGAP1-202ENST00000418600 NCOA1Q15788 1441 aa20.66■□□□□ 0.9
SYNGAP1-202ENST00000418600 FAM184AQ8NB25 1140 aa20.66■□□□□ 0.9
SYNGAP1-202ENST00000418600 ACEP12821 1306 aa20.66■□□□□ 0.9
SYNGAP1-202ENST00000418600 WWC2Q6AWC2 1192 aa20.65■□□□□ 0.9
SYNGAP1-202ENST00000418600 CFAP74Q9C0B2 1584 aa20.65■□□□□ 0.9
SYNGAP1-202ENST00000418600 H3BQV1 296 aa20.65■□□□□ 0.9
SYNGAP1-202ENST00000418600 IFFO2Q5TF58 517 aa20.65■□□□□ 0.9
SYNGAP1-202ENST00000418600 ZNF772Q68DY9 489 aaPredicted RBP20.65■□□□□ 0.9
SYNGAP1-202ENST00000418600 SPRYD3Q8NCJ5 442 aa20.65■□□□□ 0.9
SYNGAP1-202ENST00000418600 ZNF428Q96B54 188 aa20.65■□□□□ 0.9
SYNGAP1-202ENST00000418600 ATP6V1AP38606 617 aa20.64■□□□□ 0.89
SYNGAP1-202ENST00000418600 DZIP1LQ8IYY4 767 aaKnown RBP20.64■□□□□ 0.89
SYNGAP1-202ENST00000418600 DNAJC2Q99543 621 aaKnown RBP20.64■□□□□ 0.89
SYNGAP1-202ENST00000418600 ZCRB1Q8TBF4 217 aaKnown RBP20.64■□□□□ 0.89
SYNGAP1-202ENST00000418600 KIF7Q2M1P5 1343 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms