RNA–Protein interactions for RNA: ENST00000415740.6

CCDC146-202, Transcript of coiled-coil domain containing 146, humanhuman

TSL 1 (best)

Gene CCDC146, Length 2,405 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146-202ENST00000415740 SLC4A3P48751 1232 aa6.2□□□□□ -1.42
CCDC146-202ENST00000415740 SND1Q7KZF4 910 aaKnown RBP eCLIP6.2□□□□□ -1.42
CCDC146-202ENST00000415740 RETREG3Q86VR2 466 aa6.2□□□□□ -1.42
CCDC146-202ENST00000415740 PNMA1Q8ND90 353 aa6.2□□□□□ -1.42
CCDC146-202ENST00000415740 STK32AQ8WU08 396 aa6.2□□□□□ -1.42
CCDC146-202ENST00000415740 KANK4Q5T7N3 995 aaPredicted RBP6.2□□□□□ -1.42
CCDC146-202ENST00000415740 DEPDC4Q8N2C3 294 aa6.2□□□□□ -1.42
CCDC146-202ENST00000415740 TMEM164Q5U3C3 297 aa6.19□□□□□ -1.42
CCDC146-202ENST00000415740 SP7Q8TDD2 431 aaPredicted RBP6.19□□□□□ -1.42
CCDC146-202ENST00000415740 ZMIZ1Q9ULJ6 1067 aa6.19□□□□□ -1.42
CCDC146-202ENST00000415740 E9PSI1 815 aa6.18□□□□□ -1.42
CCDC146-202ENST00000415740 MORN1Q5T089 497 aa6.18□□□□□ -1.42
CCDC146-202ENST00000415740 RNF19BQ6ZMZ0 732 aa6.18□□□□□ -1.42
CCDC146-202ENST00000415740 ARHGAP33O14559 1287 aa6.18□□□□□ -1.42
CCDC146-202ENST00000415740 NR1H3Q13133 447 aa6.18□□□□□ -1.42
CCDC146-202ENST00000415740 CCER1Q8TC90 406 aaPredicted RBP6.18□□□□□ -1.42
CCDC146-202ENST00000415740 BLOC1S3Q6QNY0 202 aa6.17□□□□□ -1.42
CCDC146-202ENST00000415740 LYPD8Q6UX82 237 aa6.17□□□□□ -1.42
CCDC146-202ENST00000415740 NAP1L2Q9ULW6 460 aaPredicted RBP6.17□□□□□ -1.42
CCDC146-202ENST00000415740 CDK11AQ9UQ88 783 aaPredicted RBP6.17□□□□□ -1.42
CCDC146-202ENST00000415740 USP17L3A6NCW0 530 aa6.17□□□□□ -1.42
CCDC146-202ENST00000415740 USP17L4A6NCW7 530 aa6.17□□□□□ -1.42
CCDC146-202ENST00000415740 ZBBXA8MT70 800 aa6.17□□□□□ -1.42
CCDC146-202ENST00000415740 VARS2Q5ST30 1063 aaKnown RBP6.17□□□□□ -1.42
CCDC146-202ENST00000415740 USP17L2Q6R6M4 530 aa6.17□□□□□ -1.42
CCDC146-202ENST00000415740 USP17L1Q7RTZ2 530 aa6.17□□□□□ -1.42
CCDC146-202ENST00000415740 MAP10Q9P2G4 905 aa6.17□□□□□ -1.42
CCDC146-202ENST00000415740 VPS9D1Q9Y2B5 631 aa6.17□□□□□ -1.42
CCDC146-202ENST00000415740 C11orf95C9JLR9 678 aaPredicted RBP6.16□□□□□ -1.42
CCDC146-202ENST00000415740 SKIP12755 728 aa6.16□□□□□ -1.42
CCDC146-202ENST00000415740 PHLDB3Q6NSJ2 640 aa6.16□□□□□ -1.42
CCDC146-202ENST00000415740 FAM174AQ8TBP5 190 aa6.16□□□□□ -1.42
CCDC146-202ENST00000415740 FKBPLQ9UIM3 349 aa6.16□□□□□ -1.42
CCDC146-202ENST00000415740 NOVA2Q9UNW9 492 aaKnown RBP6.16□□□□□ -1.42
CCDC146-202ENST00000415740 SNPHO15079 494 aa6.16□□□□□ -1.42
CCDC146-202ENST00000415740 IGSF3O75054 1194 aa6.16□□□□□ -1.42
CCDC146-202ENST00000415740 DESI1Q6ICB0 168 aa6.16□□□□□ -1.42
CCDC146-202ENST00000415740 ZFRQ96KR1 1074 aaKnown RBP6.16□□□□□ -1.42
CCDC146-202ENST00000415740 BCCIPQ9P287 314 aaKnown RBP eCLIP6.16□□□□□ -1.42
CCDC146-202ENST00000415740 USP17L5A8MUK1 530 aa6.15□□□□□ -1.42
CCDC146-202ENST00000415740 KMT5BQ4FZB7 885 aa6.15□□□□□ -1.42
CCDC146-202ENST00000415740 CRTC2Q53ET0 693 aaPredicted RBP6.15□□□□□ -1.42
CCDC146-202ENST00000415740 MAMSTRQ6ZN01 415 aa6.15□□□□□ -1.43
CCDC146-202ENST00000415740 ERBB3P21860 1342 aa6.14□□□□□ -1.43
CCDC146-202ENST00000415740 Q3C1V9 767 aa6.14□□□□□ -1.43
CCDC146-202ENST00000415740 USB1Q9BQ65 265 aaKnown RBP6.14□□□□□ -1.43
CCDC146-202ENST00000415740 MKRN1Q9UHC7 482 aaKnown RBP6.14□□□□□ -1.43
CCDC146-202ENST00000415740 GNEQ9Y223 722 aaKnown RBP6.14□□□□□ -1.43
CCDC146-202ENST00000415740 ACTN4O43707 911 aaKnown RBP6.14□□□□□ -1.43
CCDC146-202ENST00000415740 SCNN1AP37088 669 aa6.14□□□□□ -1.43
CCDC146-202ENST00000415740 SLC4A5Q9BY07 1137 aa6.14□□□□□ -1.43
CCDC146-202ENST00000415740 SLAIN2Q9P270 581 aa6.14□□□□□ -1.43
CCDC146-202ENST00000415740 HSP90B1P14625 803 aaKnown RBP6.13□□□□□ -1.43
CCDC146-202ENST00000415740 CDK11BP21127 795 aaKnown RBP6.13□□□□□ -1.43
CCDC146-202ENST00000415740 CTHP32929 405 aa6.13□□□□□ -1.43
CCDC146-202ENST00000415740 IPO4Q8TEX9 1081 aaKnown RBP6.13□□□□□ -1.43
CCDC146-202ENST00000415740 NCOA4Q13772 614 aa6.13□□□□□ -1.43
CCDC146-202ENST00000415740 ELOAQ14241 798 aaKnown RBP6.13□□□□□ -1.43
CCDC146-202ENST00000415740 NBPF3Q9H094 633 aa6.13□□□□□ -1.43
CCDC146-202ENST00000415740 AMOTL2Q9Y2J4 779 aa6.13□□□□□ -1.43
CCDC146-202ENST00000415740 F12P00748 615 aaPredicted RBP6.12□□□□□ -1.43
CCDC146-202ENST00000415740 RASA1P20936 1047 aa6.12□□□□□ -1.43
CCDC146-202ENST00000415740 KCNH2Q12809 1159 aa6.12□□□□□ -1.43
CCDC146-202ENST00000415740 SCUBE3Q8IX30 993 aa6.12□□□□□ -1.43
CCDC146-202ENST00000415740 B4GALNT3Q6L9W6 998 aa6.11□□□□□ -1.43
CCDC146-202ENST00000415740 TXNDC2Q86VQ3 553 aa6.11□□□□□ -1.43
CCDC146-202ENST00000415740 UNCXA6NJT0 531 aa6.11□□□□□ -1.43
CCDC146-202ENST00000415740 USP17L15C9J2P7 530 aa6.11□□□□□ -1.43
CCDC146-202ENST00000415740 USP17L10C9JJH3 530 aa6.11□□□□□ -1.43
CCDC146-202ENST00000415740 USP17L13C9JLJ4 530 aa6.11□□□□□ -1.43
CCDC146-202ENST00000415740 USP17L12C9JPN9 530 aa6.11□□□□□ -1.43
CCDC146-202ENST00000415740 BHMG1C9JSJ3 638 aaPredicted RBP6.11□□□□□ -1.43
CCDC146-202ENST00000415740 USP17L11C9JVI0 530 aa6.11□□□□□ -1.43
CCDC146-202ENST00000415740 USP17L21D6R901 530 aa6.11□□□□□ -1.43
CCDC146-202ENST00000415740 USP17L18D6R9N7 530 aa6.11□□□□□ -1.43
CCDC146-202ENST00000415740 USP17L22D6RA61 530 aa6.11□□□□□ -1.43
CCDC146-202ENST00000415740 USP17L17D6RBQ6 530 aa6.11□□□□□ -1.43
CCDC146-202ENST00000415740 USP17L19D6RCP7 530 aa6.11□□□□□ -1.43
CCDC146-202ENST00000415740 USP17L20D6RJB6 530 aa6.11□□□□□ -1.43
CCDC146-202ENST00000415740 RRP9O43818 475 aaKnown RBP6.11□□□□□ -1.43
CCDC146-202ENST00000415740 USP17L24Q0WX57 530 aa6.11□□□□□ -1.43
CCDC146-202ENST00000415740 BRICD5Q6PL45 260 aa6.11□□□□□ -1.43
CCDC146-202ENST00000415740 LAPTM4BQ86VI4 370 aa6.11□□□□□ -1.43
CCDC146-202ENST00000415740 NFATC2IPQ8NCF5 419 aa6.11□□□□□ -1.43
CCDC146-202ENST00000415740 LRCH3Q96II8 777 aa6.11□□□□□ -1.43
CCDC146-202ENST00000415740 SSFA2P28290 1259 aa6.1□□□□□ -1.43
CCDC146-202ENST00000415740 PTK7Q13308 1070 aa6.1□□□□□ -1.43
CCDC146-202ENST00000415740 CEP126Q9P2H0 1117 aa6.1□□□□□ -1.43
CCDC146-202ENST00000415740 FAM196BA6NMK8 535 aa6.1□□□□□ -1.43
CCDC146-202ENST00000415740 SERPINB4P48594 390 aa6.1□□□□□ -1.43
CCDC146-202ENST00000415740 FAM69CQ0P6D2 419 aa6.1□□□□□ -1.43
CCDC146-202ENST00000415740 TSGA10IPQ3SY00 556 aa6.1□□□□□ -1.43
CCDC146-202ENST00000415740 SLFNL1Q499Z3 407 aa6.1□□□□□ -1.43
CCDC146-202ENST00000415740 MRPL50Q8N5N7 158 aaKnown RBP6.1□□□□□ -1.43
CCDC146-202ENST00000415740 ZNF594Q96JF6 807 aaPredicted RBP6.1□□□□□ -1.43
CCDC146-202ENST00000415740 OCSTAMPQ9BR26 566 aa6.1□□□□□ -1.43
CCDC146-202ENST00000415740 CHMP4BQ9H444 224 aaKnown RBP6.1□□□□□ -1.43
CCDC146-202ENST00000415740 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.1□□□□□ -1.43
CCDC146-202ENST00000415740 PLEKHM2Q8IWE5 1019 aa6.09□□□□□ -1.43
CCDC146-202ENST00000415740 PCDHB9Q9Y5E1 797 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms