RNA–Protein interactions for RNA: ENST00000415740.6

CCDC146-202, Transcript of coiled-coil domain containing 146, humanhuman

TSL 1 (best)

Gene CCDC146, Length 2,405 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146-202ENST00000415740 CHIC1Q5VXU3 224 aa13.6□□□□□ -0.23
CCDC146-202ENST00000415740 AEBP2Q6ZN18 517 aaPredicted RBP13.49□□□□□ -0.25
CCDC146-202ENST00000415740 PHF23Q9BUL5 403 aaPredicted RBP12.1□□□□□ -0.47
CCDC146-202ENST00000415740 PLPPR3Q6T4P5 718 aa11.27□□□□□ -0.6
CCDC146-202ENST00000415740 SENP3Q9H4L4 574 aaPredicted RBP11.25□□□□□ -0.61
CCDC146-202ENST00000415740 ADRA2BP18089 450 aa10.68□□□□□ -0.7
CCDC146-202ENST00000415740 PPP6R1Q9UPN7 881 aa10.55□□□□□ -0.72
CCDC146-202ENST00000415740 KCNA4P22459 653 aa10.48□□□□□ -0.73
CCDC146-202ENST00000415740 FOXD1Q16676 465 aa10.46□□□□□ -0.73
CCDC146-202ENST00000415740 EHMT2Q96KQ7 1210 aa10.46□□□□□ -0.73
CCDC146-202ENST00000415740 PPP4R3CPQ6ZMV5 832 aa10.04□□□□□ -0.8
CCDC146-202ENST00000415740 CSRNP3Q8WYN3 585 aa10.03□□□□□ -0.8
CCDC146-202ENST00000415740 SLC4A1APQ9BWU0 796 aaKnown RBP10.02□□□□□ -0.81
CCDC146-202ENST00000415740 PIAS4Q8N2W9 510 aaPredicted RBP9.99□□□□□ -0.81
CCDC146-202ENST00000415740 NCBP3Q53F19 620 aaKnown RBP9.86□□□□□ -0.83
CCDC146-202ENST00000415740 NPM3O75607 178 aaKnown RBP9.81□□□□□ -0.84
CCDC146-202ENST00000415740 ZBTB22O15209 634 aa9.67□□□□□ -0.86
CCDC146-202ENST00000415740 CNKSR2Q8WXI2 1034 aa9.6□□□□□ -0.87
CCDC146-202ENST00000415740 SCAF1Q9H7N4 1312 aaKnown RBP9.52□□□□□ -0.89
CCDC146-202ENST00000415740 MAPK8IP2Q13387 824 aaPredicted RBP9.45□□□□□ -0.9
CCDC146-202ENST00000415740 FOXD4L1Q9NU39 408 aa9.4□□□□□ -0.91
CCDC146-202ENST00000415740 MSH5O43196 834 aa9.33□□□□□ -0.92
CCDC146-202ENST00000415740 DNAJC5BQ9UF47 199 aa9.27□□□□□ -0.93
CCDC146-202ENST00000415740 RNF216Q9NWF9 866 aaPredicted RBP9.26□□□□□ -0.93
CCDC146-202ENST00000415740 RTN4Q9NQC3 1192 aaKnown RBP9.21□□□□□ -0.93
CCDC146-202ENST00000415740 SLC24A1O60721 1099 aa9.14□□□□□ -0.95
CCDC146-202ENST00000415740 SLC4A2P04920 1241 aa9.14□□□□□ -0.95
CCDC146-202ENST00000415740 AMER1Q5JTC6 1135 aaPredicted RBP9.09□□□□□ -0.95
CCDC146-202ENST00000415740 HOXD11P31277 338 aaPredicted RBP9.09□□□□□ -0.96
CCDC146-202ENST00000415740 DMRT2Q9Y5R5 561 aa9.07□□□□□ -0.96
CCDC146-202ENST00000415740 FKBP8Q14318 412 aa9.03□□□□□ -0.96
CCDC146-202ENST00000415740 MYCNP04198 464 aaPredicted RBP8.99□□□□□ -0.97
CCDC146-202ENST00000415740 ATXN8OSP0DMR3 200 aa8.96□□□□□ -0.98
CCDC146-202ENST00000415740 ATF5Q9Y2D1 282 aaPredicted RBP8.83□□□□□ -1
CCDC146-202ENST00000415740 DCAF8L1A6NGE4 600 aa8.78□□□□□ -1
CCDC146-202ENST00000415740 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.72□□□□□ -1.01
CCDC146-202ENST00000415740 POTEDQ86YR6 584 aa8.65□□□□□ -1.02
CCDC146-202ENST00000415740 U3KPZ7 1027 aaPredicted RBP8.64□□□□□ -1.03
CCDC146-202ENST00000415740 SAMD1Q6SPF0 538 aaPredicted RBP8.63□□□□□ -1.03
CCDC146-202ENST00000415740 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.61□□□□□ -1.03
CCDC146-202ENST00000415740 HNRNPUL2Q1KMD3 747 aaKnown RBP8.61□□□□□ -1.03
CCDC146-202ENST00000415740 ZNF219Q9P2Y4 722 aaPredicted RBP8.54□□□□□ -1.04
CCDC146-202ENST00000415740 SPDYE4A6NLX3 237 aa8.48□□□□□ -1.05
CCDC146-202ENST00000415740 FBXO3Q9UK99 471 aa8.46□□□□□ -1.05
CCDC146-202ENST00000415740 MKRN4PQ13434 485 aaPredicted RBP8.44□□□□□ -1.06
CCDC146-202ENST00000415740 PLCB2Q00722 1185 aa8.42□□□□□ -1.06
CCDC146-202ENST00000415740 VASPP50552 380 aaPredicted RBP8.39□□□□□ -1.07
CCDC146-202ENST00000415740 DCAF8L2P0C7V8 631 aa8.39□□□□□ -1.07
CCDC146-202ENST00000415740 IFNLR1Q8IU57 520 aaPredicted RBP8.37□□□□□ -1.07
CCDC146-202ENST00000415740 PROM2Q8N271 834 aa8.35□□□□□ -1.07
CCDC146-202ENST00000415740 APLP2Q06481 763 aa8.34□□□□□ -1.07
CCDC146-202ENST00000415740 HAP1P54257 671 aaPredicted RBP8.34□□□□□ -1.07
CCDC146-202ENST00000415740 TRHP20396 242 aaPredicted RBP8.32□□□□□ -1.08
CCDC146-202ENST00000415740 FBLN2P98095 1184 aa8.3□□□□□ -1.08
CCDC146-202ENST00000415740 SPINK5Q9NQ38 1064 aaPredicted RBP8.3□□□□□ -1.08
CCDC146-202ENST00000415740 POLA2Q14181 598 aa8.3□□□□□ -1.08
CCDC146-202ENST00000415740 PKD2Q13563 968 aa8.28□□□□□ -1.08
CCDC146-202ENST00000415740 PRKCSHP14314 528 aaPredicted RBP8.22□□□□□ -1.09
CCDC146-202ENST00000415740 PELP1Q8IZL8 1130 aaKnown RBP8.21□□□□□ -1.1
CCDC146-202ENST00000415740 CAPN15O75808 1086 aa8.2□□□□□ -1.1
CCDC146-202ENST00000415740 BCANQ96GW7 911 aa8.18□□□□□ -1.1
CCDC146-202ENST00000415740 KLHL34Q8N239 644 aa8.16□□□□□ -1.1
CCDC146-202ENST00000415740 MYT1Q01538 1121 aa8.15□□□□□ -1.1
CCDC146-202ENST00000415740 ABCB7O75027 752 aa8.14□□□□□ -1.11
CCDC146-202ENST00000415740 VSIG10Q8N0Z9 540 aa8.14□□□□□ -1.11
CCDC146-202ENST00000415740 NPM1P06748 294 aaKnown RBP eCLIP8.12□□□□□ -1.11
CCDC146-202ENST00000415740 TAOK2Q9UL54 1235 aa8.12□□□□□ -1.11
CCDC146-202ENST00000415740 ECM2O94769 699 aaPredicted RBP8.12□□□□□ -1.11
CCDC146-202ENST00000415740 KDM2AQ9Y2K7 1162 aa8.12□□□□□ -1.11
CCDC146-202ENST00000415740 PAXIP1Q6ZW49 1069 aaPredicted RBP8.11□□□□□ -1.11
CCDC146-202ENST00000415740 SPOCK2Q92563 424 aa8.1□□□□□ -1.11
CCDC146-202ENST00000415740 RNF39Q9H2S5 420 aa8.1□□□□□ -1.11
CCDC146-202ENST00000415740 CFAP44Q96MT7 982 aa8.1□□□□□ -1.11
CCDC146-202ENST00000415740 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.09□□□□□ -1.11
CCDC146-202ENST00000415740 BBXQ8WY36 941 aaPredicted RBP8.08□□□□□ -1.12
CCDC146-202ENST00000415740 RGL2O15211 777 aa8.05□□□□□ -1.12
CCDC146-202ENST00000415740 ZBTB12Q9Y330 459 aaPredicted RBP8.05□□□□□ -1.12
CCDC146-202ENST00000415740 ZNF692Q9BU19 519 aaPredicted RBP8.05□□□□□ -1.12
CCDC146-202ENST00000415740 PLCD3Q8N3E9 789 aa8.04□□□□□ -1.12
CCDC146-202ENST00000415740 TPRNQ4KMQ1 711 aa8.03□□□□□ -1.12
CCDC146-202ENST00000415740 MIER1Q8N108 512 aa8.01□□□□□ -1.13
CCDC146-202ENST00000415740 OSCARQ8IYS5 282 aa8□□□□□ -1.13
CCDC146-202ENST00000415740 TSHZ2Q9NRE2 1034 aa8□□□□□ -1.13
CCDC146-202ENST00000415740 C1QBPQ07021 282 aaKnown RBP7.99□□□□□ -1.13
CCDC146-202ENST00000415740 STAG3Q9UJ98 1225 aa7.99□□□□□ -1.13
CCDC146-202ENST00000415740 SPRYD3Q8NCJ5 442 aa7.98□□□□□ -1.13
CCDC146-202ENST00000415740 PABPN1Q86U42 306 aaKnown RBP eCLIP7.97□□□□□ -1.13
CCDC146-202ENST00000415740 CHGAP10645 457 aaKnown RBP7.96□□□□□ -1.14
CCDC146-202ENST00000415740 CIZ1Q9ULV3 898 aaPredicted RBP7.95□□□□□ -1.14
CCDC146-202ENST00000415740 SSUH2Q9Y2M2 353 aa7.93□□□□□ -1.14
CCDC146-202ENST00000415740 SPDYE2BA6NHP3 402 aa7.93□□□□□ -1.14
CCDC146-202ENST00000415740 SPDYE6P0CI01 402 aa7.93□□□□□ -1.14
CCDC146-202ENST00000415740 SPDYE2Q495Y8 402 aa7.93□□□□□ -1.14
CCDC146-202ENST00000415740 DSG3P32926 999 aa7.91□□□□□ -1.14
CCDC146-202ENST00000415740 TTBK1Q5TCY1 1321 aaPredicted RBP7.9□□□□□ -1.14
CCDC146-202ENST00000415740 PLEKHG5O94827 1062 aa7.83□□□□□ -1.16
CCDC146-202ENST00000415740 RNF25Q96BH1 459 aaPredicted RBP7.81□□□□□ -1.16
CCDC146-202ENST00000415740 ZBTB47Q9UFB7 747 aaPredicted RBP7.81□□□□□ -1.16
CCDC146-202ENST00000415740 NBR1Q14596 966 aa7.8□□□□□ -1.16
CCDC146-202ENST00000415740 HS6ST3Q8IZP7 471 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms